RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 TRIQKQ629K1 86 aa9.46□□□□□ -0.9
SNORD88B-201ENST00000408454 C16orf54Q6UWD8 224 aa9.46□□□□□ -0.9
SNORD88B-201ENST00000408454 TMED4Q7Z7H5 227 aa9.46□□□□□ -0.9
SNORD88B-201ENST00000408454 LRTM2Q8N967 370 aa9.46□□□□□ -0.9
SNORD88B-201ENST00000408454 COQ8AQ8NI60 647 aa9.46□□□□□ -0.9
SNORD88B-201ENST00000408454 NPIPB3Q92617 1050 aa9.46□□□□□ -0.9
SNORD88B-201ENST00000408454 RNF125Q96EQ8 232 aa9.46□□□□□ -0.9
SNORD88B-201ENST00000408454 SLIRPQ9GZT3 109 aaKnown RBP9.46□□□□□ -0.9
SNORD88B-201ENST00000408454 A0A0G2JRQ6 117 aa9.45□□□□□ -0.9
SNORD88B-201ENST00000408454 ZNF688P0C7X2 276 aa9.45□□□□□ -0.9
SNORD88B-201ENST00000408454 LGALS9CQ6DKI2 356 aa9.45□□□□□ -0.9
SNORD88B-201ENST00000408454 Q6ZRM9 215 aa9.45□□□□□ -0.9
SNORD88B-201ENST00000408454 TRPT1Q86TN4 253 aaKnown RBP9.45□□□□□ -0.9
SNORD88B-201ENST00000408454 IGHV3-66A0A0C4DH42 116 aa9.44□□□□□ -0.9
SNORD88B-201ENST00000408454 NKX2-1P43699 371 aaPredicted RBP9.44□□□□□ -0.9
SNORD88B-201ENST00000408454 GALR1P47211 349 aa9.44□□□□□ -0.9
SNORD88B-201ENST00000408454 PSMB3P49720 205 aa9.44□□□□□ -0.9
SNORD88B-201ENST00000408454 SUPT4H1P63272 117 aaKnown RBP9.44□□□□□ -0.9
SNORD88B-201ENST00000408454 PSMG4Q5JS54 123 aa9.44□□□□□ -0.9
SNORD88B-201ENST00000408454 ACTL10Q5JWF8 245 aa9.44□□□□□ -0.9
SNORD88B-201ENST00000408454 LEMD1Q68G75 181 aa9.44□□□□□ -0.9
SNORD88B-201ENST00000408454 LHFPL5Q8TAF8 219 aa9.44□□□□□ -0.9
SNORD88B-201ENST00000408454 DCANP1Q8TF63 244 aa9.44□□□□□ -0.9
SNORD88B-201ENST00000408454 GLMPQ8WWB7 406 aa9.44□□□□□ -0.9
SNORD88B-201ENST00000408454 C7orf50Q9BRJ6 194 aaKnown RBP9.44□□□□□ -0.9
SNORD88B-201ENST00000408454 PBDC1Q9BVG4 233 aa9.44□□□□□ -0.9
SNORD88B-201ENST00000408454 RBKSQ9H477 322 aa9.44□□□□□ -0.9
SNORD88B-201ENST00000408454 TBC1D24Q9ULP9 559 aa9.44□□□□□ -0.9
SNORD88B-201ENST00000408454 U3KQE9 123 aa9.44□□□□□ -0.9
SNORD88B-201ENST00000408454 SMIM9A6NGZ8 99 aa9.43□□□□□ -0.9
SNORD88B-201ENST00000408454 BUB3O43684 328 aa9.43□□□□□ -0.9
SNORD88B-201ENST00000408454 PSG1P11464 419 aa9.43□□□□□ -0.9
SNORD88B-201ENST00000408454 EBLN2Q6P2I7 272 aa9.43□□□□□ -0.9
SNORD88B-201ENST00000408454 LYZL2Q7Z4W2 148 aa9.43□□□□□ -0.9
SNORD88B-201ENST00000408454 OR8I2Q8N0Y5 310 aa9.43□□□□□ -0.9
SNORD88B-201ENST00000408454 BPIFCQ8NFQ6 507 aa9.43□□□□□ -0.9
SNORD88B-201ENST00000408454 CLUHP3Q96NS8 147 aa9.43□□□□□ -0.9
SNORD88B-201ENST00000408454 TRGV9Q99603 122 aa9.43□□□□□ -0.9
SNORD88B-201ENST00000408454 PAIP2BQ9ULR5 123 aaKnown RBP9.43□□□□□ -0.9
SNORD88B-201ENST00000408454 TRAV10A0A0B4J240 114 aa9.42□□□□□ -0.9
SNORD88B-201ENST00000408454 ISLRO14498 428 aa9.42□□□□□ -0.9
SNORD88B-201ENST00000408454 SYNGR2O43760 224 aa9.42□□□□□ -0.9
SNORD88B-201ENST00000408454 APOHP02749 345 aaPredicted RBP9.42□□□□□ -0.9
SNORD88B-201ENST00000408454 AMBPP02760 352 aa9.42□□□□□ -0.9
SNORD88B-201ENST00000408454 SELENOTP62341 195 aa9.42□□□□□ -0.9
SNORD88B-201ENST00000408454 OR4D5Q8NGN0 318 aa9.42□□□□□ -0.9
SNORD88B-201ENST00000408454 SOSTQ9BQB4 213 aa9.42□□□□□ -0.9
SNORD88B-201ENST00000408454 RPRMQ9NS64 109 aa9.42□□□□□ -0.9
SNORD88B-201ENST00000408454 STRAPQ9Y3F4 350 aaKnown RBP9.42□□□□□ -0.9
SNORD88B-201ENST00000408454 KMT2CQ8NEZ4 4911 aaKnown RBP9.42□□□□□ -0.9
SNORD88B-201ENST00000408454 ZNF705EA8MWA4 302 aaPredicted RBP9.41□□□□□ -0.9
SNORD88B-201ENST00000408454 RAP2BP61225 183 aa9.41□□□□□ -0.9
SNORD88B-201ENST00000408454 LYZP61626 148 aa9.41□□□□□ -0.9
SNORD88B-201ENST00000408454 B2MP61769 119 aa9.41□□□□□ -0.9
SNORD88B-201ENST00000408454 AKR1C1Q04828 323 aa9.41□□□□□ -0.9
SNORD88B-201ENST00000408454 FOXI2Q6ZQN5 318 aa9.41□□□□□ -0.9
SNORD88B-201ENST00000408454 RAB40CQ96S21 281 aa9.41□□□□□ -0.9
SNORD88B-201ENST00000408454 TMEM147Q9BVK8 224 aa9.41□□□□□ -0.9
SNORD88B-201ENST00000408454 NDUFA13Q9P0J0 144 aa9.41□□□□□ -0.9
SNORD88B-201ENST00000408454 GOLT1BQ9Y3E0 138 aa9.41□□□□□ -0.9
SNORD88B-201ENST00000408454 SFT2D2O95562 160 aa9.4□□□□□ -0.9
SNORD88B-201ENST00000408454 HLA-DRB4P13762 266 aa9.4□□□□□ -0.9
SNORD88B-201ENST00000408454 USF2Q15853 346 aaPredicted RBP9.4□□□□□ -0.9
SNORD88B-201ENST00000408454 OR1B1Q8NGR6 318 aa9.4□□□□□ -0.9
SNORD88B-201ENST00000408454 TRIM63Q969Q1 353 aa9.4□□□□□ -0.9
SNORD88B-201ENST00000408454 FAM210BQ96KR6 192 aa9.4□□□□□ -0.9
SNORD88B-201ENST00000408454 HLA-DRB4X5D2U9 266 aa9.4□□□□□ -0.9
SNORD88B-201ENST00000408454 NXPH3O95157 252 aa9.39□□□□□ -0.91
SNORD88B-201ENST00000408454 GAMTQ14353 236 aa9.39□□□□□ -0.91
SNORD88B-201ENST00000408454 MLANAQ16655 118 aa9.39□□□□□ -0.91
SNORD88B-201ENST00000408454 PXDC1Q5TGL8 231 aa9.39□□□□□ -0.91
SNORD88B-201ENST00000408454 NEU1Q99519 415 aa9.39□□□□□ -0.91
SNORD88B-201ENST00000408454 MRPL36Q9P0J6 103 aaKnown RBP9.39□□□□□ -0.91
SNORD88B-201ENST00000408454 MGAT4CQ9UBM8 478 aa9.39□□□□□ -0.91
SNORD88B-201ENST00000408454 IGHV4-28A0A0C4DH34 117 aa9.38□□□□□ -0.91
SNORD88B-201ENST00000408454 FNDC10F2Z333 226 aa9.38□□□□□ -0.91
SNORD88B-201ENST00000408454 PITX3O75364 302 aa9.38□□□□□ -0.91
SNORD88B-201ENST00000408454 DUSP14O95147 198 aaKnown RBP9.38□□□□□ -0.91
SNORD88B-201ENST00000408454 SPART-AS1P0CW21 52 aa9.38□□□□□ -0.91
SNORD88B-201ENST00000408454 RPL7P18124 248 aaKnown RBP9.38□□□□□ -0.91
SNORD88B-201ENST00000408454 RAB31Q13636 194 aa9.38□□□□□ -0.91
SNORD88B-201ENST00000408454 ZNF846Q147U1 533 aa9.38□□□□□ -0.91
SNORD88B-201ENST00000408454 ZNF124Q15973 351 aa9.38□□□□□ -0.91
SNORD88B-201ENST00000408454 LILRB2Q8N423 598 aa9.38□□□□□ -0.91
SNORD88B-201ENST00000408454 THAP8Q8NA92 274 aa9.38□□□□□ -0.91
SNORD88B-201ENST00000408454 RNF126Q9BV68 326 aa9.38□□□□□ -0.91
SNORD88B-201ENST00000408454 H3BMM0 161 aa9.37□□□□□ -0.91
SNORD88B-201ENST00000408454 P0DMU3 169 aa9.37□□□□□ -0.91
SNORD88B-201ENST00000408454 FAM231AP0DMU4 169 aa9.37□□□□□ -0.91
SNORD88B-201ENST00000408454 FAM231CP0DMU5 169 aa9.37□□□□□ -0.91
SNORD88B-201ENST00000408454 NANOS2P60321 138 aaKnown RBP9.37□□□□□ -0.91
SNORD88B-201ENST00000408454 C4orf46Q504U0 113 aa9.37□□□□□ -0.91
SNORD88B-201ENST00000408454 SPANXN5Q5MJ07 72 aa9.37□□□□□ -0.91
SNORD88B-201ENST00000408454 CCDC190Q86UF4 302 aa9.37□□□□□ -0.91
SNORD88B-201ENST00000408454 Q8NAQ8 132 aa9.37□□□□□ -0.91
SNORD88B-201ENST00000408454 C16orf92Q96LL3 132 aa9.37□□□□□ -0.91
SNORD88B-201ENST00000408454 LINC00052Q96N35 136 aa9.37□□□□□ -0.91
SNORD88B-201ENST00000408454 SAV1Q9H4B6 383 aaPredicted RBP9.37□□□□□ -0.91
SNORD88B-201ENST00000408454 RFNGQ9Y644 331 aa9.37□□□□□ -0.91
SNORD88B-201ENST00000408454 V9GYH0 126 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms