RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 SPANXDQ9BXN6 97 aa10.7□□□□□ -0.7
RNF43-201ENST00000407977 GFRA3O60609 400 aa10.7□□□□□ -0.7
RNF43-201ENST00000407977 CRPP02741 224 aa10.7□□□□□ -0.7
RNF43-201ENST00000407977 NABP1Q96AH0 204 aa10.7□□□□□ -0.7
RNF43-201ENST00000407977 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.7□□□□□ -0.7
RNF43-201ENST00000407977 NPIPB5A8MRT5 1133 aa10.7□□□□□ -0.7
RNF43-201ENST00000407977 ATP1A1-AS1Q5TC04 95 aa10.7□□□□□ -0.7
RNF43-201ENST00000407977 LCN12Q6JVE5 192 aa10.7□□□□□ -0.7
RNF43-201ENST00000407977 A0A1B0GWJ7 208 aa10.69□□□□□ -0.7
RNF43-201ENST00000407977 TMEM249Q2WGJ8 235 aa10.69□□□□□ -0.7
RNF43-201ENST00000407977 SPATA31B1PQ5VZV4 182 aa10.69□□□□□ -0.7
RNF43-201ENST00000407977 LYZL1Q6UWQ5 148 aa10.69□□□□□ -0.7
RNF43-201ENST00000407977 PRR19A6NJB7 356 aa10.69□□□□□ -0.7
RNF43-201ENST00000407977 IGHV3OR16-8A0A075B7F1 116 aa10.69□□□□□ -0.7
RNF43-201ENST00000407977 SMAD7O15105 426 aaKnown RBP10.69□□□□□ -0.7
RNF43-201ENST00000407977 OR10W1Q8NGF6 305 aa10.69□□□□□ -0.7
RNF43-201ENST00000407977 LINC01560Q8TB33 94 aa10.69□□□□□ -0.7
RNF43-201ENST00000407977 PHLDA1Q8WV24 401 aaPredicted RBP10.69□□□□□ -0.7
RNF43-201ENST00000407977 PSG1P11464 419 aa10.68□□□□□ -0.7
RNF43-201ENST00000407977 MALP21145 153 aa10.68□□□□□ -0.7
RNF43-201ENST00000407977 C2orf82Q6UX34 121 aa10.68□□□□□ -0.7
RNF43-201ENST00000407977 ABHD17AQ96GS6 310 aa10.68□□□□□ -0.7
RNF43-201ENST00000407977 CCL19Q99731 98 aa10.68□□□□□ -0.7
RNF43-201ENST00000407977 GTSF1LQ9H1H1 148 aa10.68□□□□□ -0.7
RNF43-201ENST00000407977 FAM231BA6NCW3 169 aa10.68□□□□□ -0.7
RNF43-201ENST00000407977 HGFACQ04756 655 aa10.68□□□□□ -0.7
RNF43-201ENST00000407977 C9orf106Q8NAJ2 232 aa10.68□□□□□ -0.7
RNF43-201ENST00000407977 MBNL3Q9NUK0 354 aaKnown RBP10.68□□□□□ -0.7
RNF43-201ENST00000407977 PMS2P5A8MQ11 134 aa10.68□□□□□ -0.7
RNF43-201ENST00000407977 PF4P02776 101 aa10.68□□□□□ -0.7
RNF43-201ENST00000407977 ZNF318Q5VUA4 2279 aa10.68□□□□□ -0.7
RNF43-201ENST00000407977 VCYO14598 125 aa10.68□□□□□ -0.7
RNF43-201ENST00000407977 TOMM40O96008 361 aa10.68□□□□□ -0.7
RNF43-201ENST00000407977 TMEM155Q4W5P6 130 aa10.68□□□□□ -0.7
RNF43-201ENST00000407977 TRAV8-1A0A0A6YYK1 113 aa10.68□□□□□ -0.7
RNF43-201ENST00000407977 PRTN3P24158 256 aa10.68□□□□□ -0.7
RNF43-201ENST00000407977 PPIFP30405 207 aaKnown RBP10.68□□□□□ -0.7
RNF43-201ENST00000407977 DPH3P1Q9H4G8 78 aa10.68□□□□□ -0.7
RNF43-201ENST00000407977 RBBP6Q7Z6E9 1792 aaKnown RBP10.68□□□□□ -0.7
RNF43-201ENST00000407977 COL4A1P02462 1669 aa10.67□□□□□ -0.7
RNF43-201ENST00000407977 IGKV1-27A0A075B6S5 117 aa10.67□□□□□ -0.7
RNF43-201ENST00000407977 EREGO14944 169 aa10.67□□□□□ -0.7
RNF43-201ENST00000407977 MST1LQ2TV78 715 aa10.67□□□□□ -0.7
RNF43-201ENST00000407977 SPSB3Q6PJ21 355 aa10.67□□□□□ -0.7
RNF43-201ENST00000407977 OOSP1A8MZH6 123 aa10.67□□□□□ -0.7
RNF43-201ENST00000407977 SP9P0CG40 484 aa10.67□□□□□ -0.7
RNF43-201ENST00000407977 COL5A3P25940 1745 aaPredicted RBP10.67□□□□□ -0.7
RNF43-201ENST00000407977 PAX8Q06710 450 aa10.67□□□□□ -0.7
RNF43-201ENST00000407977 SIGLEC15Q6ZMC9 328 aa10.67□□□□□ -0.7
RNF43-201ENST00000407977 UBR3Q6ZT12 1888 aa10.67□□□□□ -0.7
RNF43-201ENST00000407977 ESPL1Q14674 2120 aa10.67□□□□□ -0.7
RNF43-201ENST00000407977 PFN1P07737 140 aaKnown RBP10.67□□□□□ -0.7
RNF43-201ENST00000407977 SPINK8P0C7L1 97 aa10.67□□□□□ -0.7
RNF43-201ENST00000407977 ZNF138P52744 262 aa10.67□□□□□ -0.7
RNF43-201ENST00000407977 OCIAD2Q56VL3 154 aa10.67□□□□□ -0.7
RNF43-201ENST00000407977 ZC2HC1BQ5TFG8 222 aa10.67□□□□□ -0.7
RNF43-201ENST00000407977 POLR3KQ9Y2Y1 108 aaPredicted RBP10.67□□□□□ -0.7
RNF43-201ENST00000407977 GBF1Q92538 1859 aa10.66□□□□□ -0.7
RNF43-201ENST00000407977 PSG3Q16557 428 aa10.66□□□□□ -0.7
RNF43-201ENST00000407977 CHAC1Q9BUX1 264 aa10.66□□□□□ -0.7
RNF43-201ENST00000407977 IGHV3OR16-10A0A075B7F0 116 aa10.66□□□□□ -0.7
RNF43-201ENST00000407977 C9orf139Q6ZV77 190 aa10.66□□□□□ -0.7
RNF43-201ENST00000407977 DPH3Q96FX2 82 aa10.66□□□□□ -0.7
RNF43-201ENST00000407977 NAA38Q9BRA0 125 aaKnown RBP10.66□□□□□ -0.7
RNF43-201ENST00000407977 KIF26BQ2KJY2 2108 aa10.66□□□□□ -0.7
RNF43-201ENST00000407977 TMEM8BA6NDV4 472 aa10.66□□□□□ -0.7
RNF43-201ENST00000407977 TIMM23O14925 209 aa10.66□□□□□ -0.7
RNF43-201ENST00000407977 TNFRSF6BO95407 300 aa10.66□□□□□ -0.7
RNF43-201ENST00000407977 IGHV2-70P01814 119 aa10.66□□□□□ -0.7
RNF43-201ENST00000407977 ZNF562Q6V9R5 426 aa10.66□□□□□ -0.7
RNF43-201ENST00000407977 RASL10AQ92737 203 aa10.66□□□□□ -0.7
RNF43-201ENST00000407977 MMP23AO75900 390 aa10.65□□□□□ -0.7
RNF43-201ENST00000407977 NCR2O95944 276 aa10.65□□□□□ -0.7
RNF43-201ENST00000407977 NTF4P34130 210 aa10.65□□□□□ -0.7
RNF43-201ENST00000407977 CT83Q5H943 113 aa10.65□□□□□ -0.7
RNF43-201ENST00000407977 GAGE1Q13065 139 aa10.65□□□□□ -0.7
RNF43-201ENST00000407977 ADAMTSL5Q6ZMM2 481 aa10.65□□□□□ -0.7
RNF43-201ENST00000407977 LINC00477Q96M19 166 aa10.65□□□□□ -0.7
RNF43-201ENST00000407977 NCOR1P1Q9H4R4 102 aa10.65□□□□□ -0.7
RNF43-201ENST00000407977 PNRC2Q9NPJ4 139 aaKnown RBP10.65□□□□□ -0.7
RNF43-201ENST00000407977 C15orf62A8K5M9 175 aa10.65□□□□□ -0.7
RNF43-201ENST00000407977 ADARB2-AS1A8MUL3 147 aa10.65□□□□□ -0.7
RNF43-201ENST00000407977 ASCL4Q6XD76 172 aa10.65□□□□□ -0.7
RNF43-201ENST00000407977 CST9LQ9H4G1 147 aa10.65□□□□□ -0.7
RNF43-201ENST00000407977 CACNA1DQ01668 2161 aa10.65□□□□□ -0.7
RNF43-201ENST00000407977 IGHV1-18A0A0C4DH31 117 aa10.65□□□□□ -0.7
RNF43-201ENST00000407977 IGHV3-11P01762 117 aa10.65□□□□□ -0.7
RNF43-201ENST00000407977 DMRTC2Q8IXT2 367 aaPredicted RBP10.65□□□□□ -0.7
RNF43-201ENST00000407977 IGKV3D-20A0A0C4DH25 116 aa10.65□□□□□ -0.71
RNF43-201ENST00000407977 ITGB1BP1O14713 200 aa10.65□□□□□ -0.71
RNF43-201ENST00000407977 C10orf91Q5T1B1 145 aa10.65□□□□□ -0.71
RNF43-201ENST00000407977 TEX43Q6ZNM6 134 aa10.65□□□□□ -0.71
RNF43-201ENST00000407977 STHQ8IWL8 128 aa10.65□□□□□ -0.71
RNF43-201ENST00000407977 EXOC3-AS1Q8N2X6 119 aa10.65□□□□□ -0.71
RNF43-201ENST00000407977 DNAJC30Q96LL9 226 aa10.65□□□□□ -0.71
RNF43-201ENST00000407977 ZNF492Q9P255 531 aa10.65□□□□□ -0.71
RNF43-201ENST00000407977 PARP14Q460N5 1801 aa10.64□□□□□ -0.71
RNF43-201ENST00000407977 CEP290O15078 2479 aa10.64□□□□□ -0.71
RNF43-201ENST00000407977 TRBV20-1A0A075B6N2 111 aa10.64□□□□□ -0.71
RNF43-201ENST00000407977 FGFBP3Q8TAT2 258 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms