RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 MORN5Q5VZ52 161 aa9.64□□□□□ -0.87
PCNX4-204ENST00000406949 C2orf88Q9BSF0 95 aa9.64□□□□□ -0.87
PCNX4-204ENST00000406949 PAM16Q9Y3D7 125 aa9.64□□□□□ -0.87
PCNX4-204ENST00000406949 ABCA2Q9BZC7 2435 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 DLEU1O43261 78 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 SERF1AO75920 110 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 BMI1P35226 326 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 FOXL1Q12952 345 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 C3orf36Q3SXR2 165 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 IGF2-ASQ6U949 168 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 ZNF833PQ6ZTB9 187 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 CACNG8Q8WXS5 425 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 PERPQ96FX8 193 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 WNK1Q9H4A3 2382 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 A0A1W2PPI3 338 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 C20orf202A1L168 122 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 OR8B3Q8NGG8 313 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 RITA1Q96K30 269 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 CLUHP3Q96NS8 147 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 OR8B2Q96RD0 313 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 RNF2Q99496 336 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 PYGO2Q9BRQ0 406 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 CLEC7AQ9BXN2 247 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 NDUFA4L2Q9NRX3 87 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 CBLN4Q9NTU7 201 aa9.63□□□□□ -0.87
PCNX4-204ENST00000406949 B9A039 149 aa9.62□□□□□ -0.87
PCNX4-204ENST00000406949 EREGO14944 169 aa9.62□□□□□ -0.87
PCNX4-204ENST00000406949 HYPMO75409 117 aa9.62□□□□□ -0.87
PCNX4-204ENST00000406949 GCGP01275 180 aa9.62□□□□□ -0.87
PCNX4-204ENST00000406949 GRNP28799 593 aaKnown RBP9.62□□□□□ -0.87
PCNX4-204ENST00000406949 PRDM13Q9H4Q3 707 aa9.62□□□□□ -0.87
PCNX4-204ENST00000406949 FNDC4Q9H6D8 234 aaPredicted RBP9.62□□□□□ -0.87
PCNX4-204ENST00000406949 ZNF586Q9NXT0 402 aa9.62□□□□□ -0.87
PCNX4-204ENST00000406949 H0Y8G0 127 aa9.62□□□□□ -0.87
PCNX4-204ENST00000406949 FRMD6-AS1P0C7T7 363 aa9.62□□□□□ -0.87
PCNX4-204ENST00000406949 SRIP30626 198 aa9.62□□□□□ -0.87
PCNX4-204ENST00000406949 SELENOTP62341 195 aa9.62□□□□□ -0.87
PCNX4-204ENST00000406949 KIR3DL3Q8N743 410 aa9.62□□□□□ -0.87
PCNX4-204ENST00000406949 OR5AN1Q8NGI8 311 aa9.62□□□□□ -0.87
PCNX4-204ENST00000406949 TMEM167AQ8TBQ9 72 aa9.62□□□□□ -0.87
PCNX4-204ENST00000406949 NAGKQ9UJ70 344 aa9.62□□□□□ -0.87
PCNX4-204ENST00000406949 POU2AF1Q16633 256 aa9.62□□□□□ -0.87
PCNX4-204ENST00000406949 TMEM177Q53S58 311 aa9.62□□□□□ -0.87
PCNX4-204ENST00000406949 Q8NA96 180 aa9.62□□□□□ -0.87
PCNX4-204ENST00000406949 OR2D3Q8NGH3 330 aa9.62□□□□□ -0.87
PCNX4-204ENST00000406949 MRPL32Q9BYC8 188 aaKnown RBP9.62□□□□□ -0.87
PCNX4-204ENST00000406949 SORL1Q92673 2214 aa9.62□□□□□ -0.87
PCNX4-204ENST00000406949 LGALS7P47929 136 aa9.61□□□□□ -0.87
PCNX4-204ENST00000406949 GBGT1Q8N5D6 347 aa9.61□□□□□ -0.87
PCNX4-204ENST00000406949 C1orf159Q96HA4 380 aa9.61□□□□□ -0.87
PCNX4-204ENST00000406949 RASL11BQ9BPW5 248 aa9.61□□□□□ -0.87
PCNX4-204ENST00000406949 C19orf24Q9BVV8 132 aa9.61□□□□□ -0.87
PCNX4-204ENST00000406949 IGHV2-26A0A0B4J1V2 119 aa9.61□□□□□ -0.87
PCNX4-204ENST00000406949 TCRBV4S1A1TA0A5B7 111 aa9.61□□□□□ -0.87
PCNX4-204ENST00000406949 PEX7O00628 323 aa9.61□□□□□ -0.87
PCNX4-204ENST00000406949 WDR73Q6P4I2 378 aa9.61□□□□□ -0.87
PCNX4-204ENST00000406949 ST6GALNAC3Q8NDV1 305 aa9.61□□□□□ -0.87
PCNX4-204ENST00000406949 RNASEH2CQ8TDP1 164 aaKnown RBP9.61□□□□□ -0.87
PCNX4-204ENST00000406949 NUDT11Q96G61 164 aa9.61□□□□□ -0.87
PCNX4-204ENST00000406949 A0A1W2PRE2 83 aa9.6□□□□□ -0.87
PCNX4-204ENST00000406949 ZNF137PP52743 207 aa9.6□□□□□ -0.87
PCNX4-204ENST00000406949 ATP5IP56385 69 aaPredicted RBP9.6□□□□□ -0.87
PCNX4-204ENST00000406949 RNASEKQ6P5S7 137 aaKnown RBP9.6□□□□□ -0.87
PCNX4-204ENST00000406949 BORCS7Q96B45 105 aa9.6□□□□□ -0.87
PCNX4-204ENST00000406949 HSBP1O75506 76 aa9.6□□□□□ -0.87
PCNX4-204ENST00000406949 APCSP02743 223 aa9.6□□□□□ -0.87
PCNX4-204ENST00000406949 TYMSP04818 313 aa9.6□□□□□ -0.87
PCNX4-204ENST00000406949 RPLP1P05386 114 aaKnown RBP9.6□□□□□ -0.87
PCNX4-204ENST00000406949 ZNF664Q8N3J9 261 aa9.6□□□□□ -0.87
PCNX4-204ENST00000406949 RAB1BQ9H0U4 201 aa9.6□□□□□ -0.87
PCNX4-204ENST00000406949 RAXQ9Y2V3 346 aa9.6□□□□□ -0.87
PCNX4-204ENST00000406949 USP9XQ93008 2570 aaPredicted RBP9.6□□□□□ -0.87
PCNX4-204ENST00000406949 C9JCJ5 164 aa9.6□□□□□ -0.87
PCNX4-204ENST00000406949 NUPR1O60356 82 aa9.6□□□□□ -0.87
PCNX4-204ENST00000406949 NBEAP1P0C6P0 100 aa9.6□□□□□ -0.87
PCNX4-204ENST00000406949 TDGF1P3P51864 188 aa9.6□□□□□ -0.87
PCNX4-204ENST00000406949 TMEM155Q4W5P6 130 aa9.6□□□□□ -0.87
PCNX4-204ENST00000406949 PPP1R27Q86WC6 154 aa9.6□□□□□ -0.87
PCNX4-204ENST00000406949 VAMP8Q9BV40 100 aa9.6□□□□□ -0.87
PCNX4-204ENST00000406949 MRPL36Q9P0J6 103 aaKnown RBP9.6□□□□□ -0.87
PCNX4-204ENST00000406949 SHISA9B4DS77 424 aa9.59□□□□□ -0.87
PCNX4-204ENST00000406949 ISLRO14498 428 aa9.59□□□□□ -0.87
PCNX4-204ENST00000406949 ZNF596Q8TC21 504 aa9.59□□□□□ -0.87
PCNX4-204ENST00000406949 HIGD1AQ9Y241 93 aa9.59□□□□□ -0.87
PCNX4-204ENST00000406949 GPR6P46095 362 aaPredicted RBP9.59□□□□□ -0.87
PCNX4-204ENST00000406949 TCTAP57738 103 aa9.59□□□□□ -0.87
PCNX4-204ENST00000406949 FAM19A2Q8N3H0 131 aa9.59□□□□□ -0.87
PCNX4-204ENST00000406949 C11orf42Q8N5U0 333 aa9.59□□□□□ -0.87
PCNX4-204ENST00000406949 OR5R1Q8NH85 324 aa9.59□□□□□ -0.87
PCNX4-204ENST00000406949 SSBP4Q9BWG4 385 aaPredicted RBP9.59□□□□□ -0.87
PCNX4-204ENST00000406949 IGHV3-35A0A0C4DH35 117 aa9.59□□□□□ -0.88
PCNX4-204ENST00000406949 F2Z2F3 143 aa9.59□□□□□ -0.88
PCNX4-204ENST00000406949 BRS3P32247 399 aa9.59□□□□□ -0.88
PCNX4-204ENST00000406949 RPL15P61313 204 aaKnown RBP9.59□□□□□ -0.88
PCNX4-204ENST00000406949 KLRD1Q13241 179 aa9.59□□□□□ -0.88
PCNX4-204ENST00000406949 TMEM249Q2WGJ8 235 aa9.59□□□□□ -0.88
PCNX4-204ENST00000406949 ZNF672Q499Z4 452 aaPredicted RBP9.59□□□□□ -0.88
PCNX4-204ENST00000406949 SRSF12Q8WXF0 261 aaKnown RBP9.59□□□□□ -0.88
PCNX4-204ENST00000406949 VKORC1Q9BQB6 163 aa9.59□□□□□ -0.88
PCNX4-204ENST00000406949 SLC25A2Q9BXI2 301 aa9.59□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms