RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 TRBV9A0A0B4J1U6 114 aa12.63□□□□□ -0.39
CGREF1-205ENST00000404694 FAM223BA6NKX1 122 aa12.63□□□□□ -0.39
CGREF1-205ENST00000404694 C17orf112F2Z3M2 114 aa12.63□□□□□ -0.39
CGREF1-205ENST00000404694 RHOGP84095 191 aa12.63□□□□□ -0.39
CGREF1-205ENST00000404694 AKR1C1Q04828 323 aa12.63□□□□□ -0.39
CGREF1-205ENST00000404694 GAMTQ14353 236 aa12.63□□□□□ -0.39
CGREF1-205ENST00000404694 DEFB121Q5J5C9 76 aa12.63□□□□□ -0.39
CGREF1-205ENST00000404694 DPPA3Q6W0C5 159 aa12.63□□□□□ -0.39
CGREF1-205ENST00000404694 FAM223AQ8IWN6 122 aa12.63□□□□□ -0.39
CGREF1-205ENST00000404694 ZNF709Q8N972 641 aa12.63□□□□□ -0.39
CGREF1-205ENST00000404694 TMEM116Q8NCL8 245 aa12.63□□□□□ -0.39
CGREF1-205ENST00000404694 FANCD2OSQ96PS1 177 aa12.63□□□□□ -0.39
CGREF1-205ENST00000404694 LSM4Q9Y4Z0 139 aaKnown RBP12.63□□□□□ -0.39
CGREF1-205ENST00000404694 COL7A1Q02388 2944 aa12.62□□□□□ -0.39
CGREF1-205ENST00000404694 SMCO3A2RU48 225 aa12.62□□□□□ -0.39
CGREF1-205ENST00000404694 I3L2K1 104 aa12.62□□□□□ -0.39
CGREF1-205ENST00000404694 SAP30O75446 220 aa12.62□□□□□ -0.39
CGREF1-205ENST00000404694 ZP3P21754 424 aa12.62□□□□□ -0.39
CGREF1-205ENST00000404694 FGF7P21781 194 aa12.62□□□□□ -0.39
CGREF1-205ENST00000404694 AKR1C8PQ5T2L2 129 aa12.62□□□□□ -0.39
CGREF1-205ENST00000404694 ACSM6Q6P461 480 aa12.62□□□□□ -0.39
CGREF1-205ENST00000404694 BTNL8Q6UX41 500 aa12.62□□□□□ -0.39
CGREF1-205ENST00000404694 COMMD7Q86VX2 200 aa12.62□□□□□ -0.39
CGREF1-205ENST00000404694 PCNPQ8WW12 178 aaKnown RBP12.62□□□□□ -0.39
CGREF1-205ENST00000404694 PRR25Q96S07 402 aa12.62□□□□□ -0.39
CGREF1-205ENST00000404694 SH3BGRL3Q9H299 93 aa12.62□□□□□ -0.39
CGREF1-205ENST00000404694 FNDC4Q9H6D8 234 aaPredicted RBP12.62□□□□□ -0.39
CGREF1-205ENST00000404694 DMRT1Q9Y5R6 373 aa12.62□□□□□ -0.39
CGREF1-205ENST00000404694 MT-CO2P00403 227 aa12.61□□□□□ -0.39
CGREF1-205ENST00000404694 TRBV12-3P01733 135 aa12.61□□□□□ -0.39
CGREF1-205ENST00000404694 C19orf35Q6ZS72 473 aa12.61□□□□□ -0.39
CGREF1-205ENST00000404694 THAP8Q8NA92 274 aa12.61□□□□□ -0.39
CGREF1-205ENST00000404694 NECAP1Q8NC96 275 aa12.61□□□□□ -0.39
CGREF1-205ENST00000404694 VN1R17PQ8TDU5 208 aa12.61□□□□□ -0.39
CGREF1-205ENST00000404694 ATP6V0BQ99437 205 aa12.61□□□□□ -0.39
CGREF1-205ENST00000404694 TXN2Q99757 166 aa12.61□□□□□ -0.39
CGREF1-205ENST00000404694 PEF1Q9UBV8 284 aaKnown RBP12.61□□□□□ -0.39
CGREF1-205ENST00000404694 ZNF256Q9Y2P7 627 aaPredicted RBP12.61□□□□□ -0.39
CGREF1-205ENST00000404694 DNAH9Q9NYC9 4486 aa12.61□□□□□ -0.39
CGREF1-205ENST00000404694 K7EIM0 57 aa12.6□□□□□ -0.39
CGREF1-205ENST00000404694 OR2J3O76001 311 aa12.6□□□□□ -0.39
CGREF1-205ENST00000404694 FCGR2BP31994 310 aaPredicted RBP12.6□□□□□ -0.39
CGREF1-205ENST00000404694 CAMLGP49069 296 aa12.6□□□□□ -0.39
CGREF1-205ENST00000404694 TMEM182Q6ZP80 229 aaPredicted RBP12.6□□□□□ -0.39
CGREF1-205ENST00000404694 EIF4E3Q8N5X7 224 aaKnown RBP12.6□□□□□ -0.39
CGREF1-205ENST00000404694 OR4X1Q8NH49 305 aa12.6□□□□□ -0.39
CGREF1-205ENST00000404694 CXorf58Q96LI9 332 aa12.6□□□□□ -0.39
CGREF1-205ENST00000404694 NPCDR1Q9BY65 106 aa12.6□□□□□ -0.39
CGREF1-205ENST00000404694 GAR1Q9NY12 217 aaKnown RBP12.6□□□□□ -0.39
CGREF1-205ENST00000404694 TRAV30A0A087WSZ9 112 aa12.59□□□□□ -0.39
CGREF1-205ENST00000404694 SCGB2A1O75556 95 aa12.59□□□□□ -0.39
CGREF1-205ENST00000404694 MBP02144 154 aa12.59□□□□□ -0.39
CGREF1-205ENST00000404694 ATP5G2Q06055 141 aa12.59□□□□□ -0.39
CGREF1-205ENST00000404694 KLF5Q13887 457 aaPredicted RBP12.59□□□□□ -0.39
CGREF1-205ENST00000404694 PXDC1Q5TGL8 231 aa12.59□□□□□ -0.39
CGREF1-205ENST00000404694 IL34Q6ZMJ4 242 aa12.59□□□□□ -0.39
CGREF1-205ENST00000404694 PLA2G2EQ9NZK7 142 aa12.59□□□□□ -0.39
CGREF1-205ENST00000404694 RAB19A4D1S5 217 aa12.58□□□□□ -0.4
CGREF1-205ENST00000404694 RPL29P47914 159 aaKnown RBP12.58□□□□□ -0.4
CGREF1-205ENST00000404694 NPBWR1P48145 328 aa12.58□□□□□ -0.4
CGREF1-205ENST00000404694 MFAP4P55083 255 aa12.58□□□□□ -0.4
CGREF1-205ENST00000404694 SELENOTP62341 195 aa12.58□□□□□ -0.4
CGREF1-205ENST00000404694 MLANAQ16655 118 aa12.58□□□□□ -0.4
CGREF1-205ENST00000404694 C15orf32Q32M92 178 aa12.58□□□□□ -0.4
CGREF1-205ENST00000404694 Q6ZRG5 221 aa12.58□□□□□ -0.4
CGREF1-205ENST00000404694 LYPD6BQ8NI32 183 aa12.58□□□□□ -0.4
CGREF1-205ENST00000404694 NPIPB3Q92617 1050 aa12.58□□□□□ -0.4
CGREF1-205ENST00000404694 MARC2Q969Z3 335 aa12.58□□□□□ -0.4
CGREF1-205ENST00000404694 ACY3Q96HD9 319 aa12.58□□□□□ -0.4
CGREF1-205ENST00000404694 TRGV9Q99603 122 aa12.58□□□□□ -0.4
CGREF1-205ENST00000404694 MGST2Q99735 147 aa12.58□□□□□ -0.4
CGREF1-205ENST00000404694 RSG1Q9BU20 258 aa12.58□□□□□ -0.4
CGREF1-205ENST00000404694 FBXL7Q9UJT9 491 aa12.58□□□□□ -0.4
CGREF1-205ENST00000404694 SORL1Q92673 2214 aa12.58□□□□□ -0.4
CGREF1-205ENST00000404694 MFSD2BA6NFX1 497 aa12.57□□□□□ -0.4
CGREF1-205ENST00000404694 AGPAT2O15120 278 aa12.57□□□□□ -0.4
CGREF1-205ENST00000404694 FABP1P07148 127 aa12.57□□□□□ -0.4
CGREF1-205ENST00000404694 RND2P52198 227 aa12.57□□□□□ -0.4
CGREF1-205ENST00000404694 SYNJ2BPP57105 145 aa12.57□□□□□ -0.4
CGREF1-205ENST00000404694 RPEL1Q2QD12 228 aa12.57□□□□□ -0.4
CGREF1-205ENST00000404694 FAM209BQ5JX69 171 aa12.57□□□□□ -0.4
CGREF1-205ENST00000404694 CITED4Q96RK1 184 aa12.57□□□□□ -0.4
CGREF1-205ENST00000404694 ELOVL1Q9BW60 279 aa12.57□□□□□ -0.4
CGREF1-205ENST00000404694 GGTLC1Q9BX51 225 aa12.57□□□□□ -0.4
CGREF1-205ENST00000404694 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.56□□□□□ -0.4
CGREF1-205ENST00000404694 TRBV7-1A0A0A6YYK4 115 aa12.56□□□□□ -0.4
CGREF1-205ENST00000404694 TEX46H3BTG2 121 aa12.56□□□□□ -0.4
CGREF1-205ENST00000404694 BMPR1BO00238 502 aa12.56□□□□□ -0.4
CGREF1-205ENST00000404694 CLN5O75503 358 aa12.56□□□□□ -0.4
CGREF1-205ENST00000404694 RAB2AP61019 212 aa12.56□□□□□ -0.4
CGREF1-205ENST00000404694 UQCC3Q6UW78 93 aa12.56□□□□□ -0.4
CGREF1-205ENST00000404694 OR9G4Q8NGQ1 327 aa12.56□□□□□ -0.4
CGREF1-205ENST00000404694 FAM213BQ8TBF2 198 aa12.56□□□□□ -0.4
CGREF1-205ENST00000404694 B9D2Q9BPU9 175 aa12.56□□□□□ -0.4
CGREF1-205ENST00000404694 C21orf62Q9NYP8 219 aa12.56□□□□□ -0.4
CGREF1-205ENST00000404694 SLC45A2Q9UMX9 530 aa12.56□□□□□ -0.4
CGREF1-205ENST00000404694 IGKV1OR2-108A0A075B7D4 117 aa12.56□□□□□ -0.4
CGREF1-205ENST00000404694 ZFP92A6NM28 416 aa12.56□□□□□ -0.4
CGREF1-205ENST00000404694 NDUFB8O95169 186 aa12.56□□□□□ -0.4
CGREF1-205ENST00000404694 HBE1P02100 147 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms