RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 HIST1H1EP10412 219 aaKnown RBP15.96■□□□□ 0.15
CCDC47-202ENST00000403162 MYCNOSP40205 109 aa15.96■□□□□ 0.15
CCDC47-202ENST00000403162 SUB1P53999 127 aaKnown RBP eCLIP15.96■□□□□ 0.15
CCDC47-202ENST00000403162 WT1-ASQ06250 92 aa15.96■□□□□ 0.15
CCDC47-202ENST00000403162 TNXAQ16473 311 aa15.96■□□□□ 0.15
CCDC47-202ENST00000403162 ATP5L2Q7Z4Y8 100 aa15.96■□□□□ 0.15
CCDC47-202ENST00000403162 NPIPB3Q92617 1050 aa15.96■□□□□ 0.15
CCDC47-202ENST00000403162 SMIM12Q96EX1 92 aa15.96■□□□□ 0.15
CCDC47-202ENST00000403162 WNT10AQ9GZT5 417 aa15.96■□□□□ 0.15
CCDC47-202ENST00000403162 LAMTOR2Q9Y2Q5 125 aa15.96■□□□□ 0.15
CCDC47-202ENST00000403162 ASPHD1Q5U4P2 390 aa15.96■□□□□ 0.14
CCDC47-202ENST00000403162 OR4C13Q8NGP0 309 aa15.96■□□□□ 0.14
CCDC47-202ENST00000403162 ALKBH7Q9BT30 221 aaPredicted RBP15.96■□□□□ 0.14
CCDC47-202ENST00000403162 DCAF16Q9NXF7 216 aa15.96■□□□□ 0.14
CCDC47-202ENST00000403162 SMG1Q96Q15 3661 aaKnown RBP15.96■□□□□ 0.14
CCDC47-202ENST00000403162 FAM90A27PA6NNH2 459 aa15.95■□□□□ 0.14
CCDC47-202ENST00000403162 HSBP1O75506 76 aa15.95■□□□□ 0.14
CCDC47-202ENST00000403162 FAM181BA6NEQ2 426 aa15.94■□□□□ 0.14
CCDC47-202ENST00000403162 C16orf97H3BN30 126 aa15.94■□□□□ 0.14
CCDC47-202ENST00000403162 FAM71F2Q6NXP2 309 aa15.94■□□□□ 0.14
CCDC47-202ENST00000403162 PDPNQ86YL7 162 aa15.94■□□□□ 0.14
CCDC47-202ENST00000403162 STPG4Q8N801 248 aa15.94■□□□□ 0.14
CCDC47-202ENST00000403162 A0A1B0GXF2 115 aa15.94■□□□□ 0.14
CCDC47-202ENST00000403162 HIGD1CA8MV81 97 aa15.94■□□□□ 0.14
CCDC47-202ENST00000403162 TNFRSF19Q9NS68 423 aa15.94■□□□□ 0.14
CCDC47-202ENST00000403162 C20orf202A1L168 122 aa15.93■□□□□ 0.14
CCDC47-202ENST00000403162 ZNF843Q8N446 348 aa15.93■□□□□ 0.14
CCDC47-202ENST00000403162 C11orf42Q8N5U0 333 aa15.93■□□□□ 0.14
CCDC47-202ENST00000403162 STXBP6Q8NFX7 210 aa15.93■□□□□ 0.14
CCDC47-202ENST00000403162 OR8B3Q8NGG8 313 aa15.93■□□□□ 0.14
CCDC47-202ENST00000403162 OR8B2Q96RD0 313 aa15.93■□□□□ 0.14
CCDC47-202ENST00000403162 EPDR1Q9UM22 224 aa15.93■□□□□ 0.14
CCDC47-202ENST00000403162 MRPS16Q9Y3D3 137 aaKnown RBP15.93■□□□□ 0.14
CCDC47-202ENST00000403162 KLF12Q9Y4X4 402 aa15.93■□□□□ 0.14
CCDC47-202ENST00000403162 M0R2Z0 102 aa15.93■□□□□ 0.14
CCDC47-202ENST00000403162 RELQ04864 619 aaPredicted RBP15.93■□□□□ 0.14
CCDC47-202ENST00000403162 PRR27Q6MZM9 219 aa15.93■□□□□ 0.14
CCDC47-202ENST00000403162 ZNF841Q6ZN19 808 aa15.93■□□□□ 0.14
CCDC47-202ENST00000403162 LINC00305Q7Z4B0 112 aa15.93■□□□□ 0.14
CCDC47-202ENST00000403162 ZFYVE26Q68DK2 2539 aa15.93■□□□□ 0.14
CCDC47-202ENST00000403162 IGLV2-23P01705 113 aa15.92■□□□□ 0.14
CCDC47-202ENST00000403162 CCL3L1P16619 93 aa15.92■□□□□ 0.14
CCDC47-202ENST00000403162 CD40P25942 277 aa15.92■□□□□ 0.14
CCDC47-202ENST00000403162 REG1BP48304 166 aa15.92■□□□□ 0.14
CCDC47-202ENST00000403162 UBE2G1P62253 170 aa15.92■□□□□ 0.14
CCDC47-202ENST00000403162 C10orf55Q5SWW7 151 aa15.92■□□□□ 0.14
CCDC47-202ENST00000403162 LCN12Q6JVE5 192 aa15.92■□□□□ 0.14
CCDC47-202ENST00000403162 EBLN2Q6P2I7 272 aa15.92■□□□□ 0.14
CCDC47-202ENST00000403162 NDUFB8O95169 186 aa15.92■□□□□ 0.14
CCDC47-202ENST00000403162 TSPOP30536 169 aa15.92■□□□□ 0.14
CCDC47-202ENST00000403162 GNG5P63218 68 aa15.92■□□□□ 0.14
CCDC47-202ENST00000403162 ATOH7Q8N100 152 aa15.92■□□□□ 0.14
CCDC47-202ENST00000403162 ZCCHC24Q8N2G6 241 aaKnown RBP15.92■□□□□ 0.14
CCDC47-202ENST00000403162 NUP37Q8NFH4 326 aa15.92■□□□□ 0.14
CCDC47-202ENST00000403162 ZNF596Q8TC21 504 aa15.92■□□□□ 0.14
CCDC47-202ENST00000403162 MRPL36Q9P0J6 103 aaKnown RBP15.92■□□□□ 0.14
CCDC47-202ENST00000403162 TRAV9-2A0A087WT02 112 aa15.91■□□□□ 0.14
CCDC47-202ENST00000403162 TNFRSF1AP19438 455 aa15.91■□□□□ 0.14
CCDC47-202ENST00000403162 LINC00311Q8N616 119 aa15.91■□□□□ 0.14
CCDC47-202ENST00000403162 C8orf31Q8N9H6 132 aa15.91■□□□□ 0.14
CCDC47-202ENST00000403162 TMEM186Q96B77 213 aa15.91■□□□□ 0.14
CCDC47-202ENST00000403162 PERPQ96FX8 193 aa15.91■□□□□ 0.14
CCDC47-202ENST00000403162 RBM14Q96PK6 669 aaKnown RBP15.91■□□□□ 0.14
CCDC47-202ENST00000403162 C2orf70A6NJV1 201 aa15.9■□□□□ 0.14
CCDC47-202ENST00000403162 VWC2LB2RUY7 222 aa15.9■□□□□ 0.14
CCDC47-202ENST00000403162 CORTO00230 105 aa15.9■□□□□ 0.14
CCDC47-202ENST00000403162 SIAH2O43255 324 aa15.9■□□□□ 0.14
CCDC47-202ENST00000403162 CDSNQ15517 529 aa15.9■□□□□ 0.14
CCDC47-202ENST00000403162 TMEM200BQ69YZ2 307 aa15.9■□□□□ 0.14
CCDC47-202ENST00000403162 OR10X1Q8NGY0 326 aa15.9■□□□□ 0.14
CCDC47-202ENST00000403162 SSBP4Q9BWG4 385 aaPredicted RBP15.9■□□□□ 0.14
CCDC47-202ENST00000403162 WASHC3Q9Y3C0 194 aa15.9■□□□□ 0.14
CCDC47-202ENST00000403162 RELNP78509 3460 aa15.9■□□□□ 0.14
CCDC47-202ENST00000403162 SLC25A5P05141 298 aaKnown RBP15.9■□□□□ 0.14
CCDC47-202ENST00000403162 GPR6P46095 362 aaPredicted RBP15.9■□□□□ 0.14
CCDC47-202ENST00000403162 CCL8P80075 99 aa15.9■□□□□ 0.14
CCDC47-202ENST00000403162 MAJINQ3KP22 176 aa15.9■□□□□ 0.14
CCDC47-202ENST00000403162 FAM162BQ5T6X4 162 aa15.9■□□□□ 0.14
CCDC47-202ENST00000403162 DMRTA1Q5VZB9 504 aa15.9■□□□□ 0.14
CCDC47-202ENST00000403162 RNASEKQ6P5S7 137 aaKnown RBP15.9■□□□□ 0.14
CCDC47-202ENST00000403162 C22orf34Q6ZV56 151 aa15.9■□□□□ 0.14
CCDC47-202ENST00000403162 GPR82Q96P67 336 aa15.9■□□□□ 0.14
CCDC47-202ENST00000403162 MLST8Q9BVC4 326 aa15.9■□□□□ 0.14
CCDC47-202ENST00000403162 PPIAL4AQ9Y536 164 aa15.9■□□□□ 0.14
CCDC47-202ENST00000403162 CFAP46Q8IYW2 2715 aa15.9■□□□□ 0.14
CCDC47-202ENST00000403162 PLCE1Q9P212 2302 aa15.89■□□□□ 0.13
CCDC47-202ENST00000403162 IGHV2-26A0A0B4J1V2 119 aa15.89■□□□□ 0.13
CCDC47-202ENST00000403162 FCN3O75636 299 aa15.89■□□□□ 0.13
CCDC47-202ENST00000403162 IGHV3-48P01763 117 aa15.89■□□□□ 0.13
CCDC47-202ENST00000403162 CAMPP49913 170 aa15.89■□□□□ 0.13
CCDC47-202ENST00000403162 CT83Q5H943 113 aa15.89■□□□□ 0.13
CCDC47-202ENST00000403162 ORAOV1Q8WV07 137 aa15.89■□□□□ 0.13
CCDC47-202ENST00000403162 ST6GALNAC6Q969X2 333 aa15.89■□□□□ 0.13
CCDC47-202ENST00000403162 ICE1Q9Y2F5 2266 aa15.89■□□□□ 0.13
CCDC47-202ENST00000403162 PLAUP00749 431 aa15.89■□□□□ 0.13
CCDC47-202ENST00000403162 CRYGCP07315 174 aa15.89■□□□□ 0.13
CCDC47-202ENST00000403162 HBBP68871 147 aa15.89■□□□□ 0.13
CCDC47-202ENST00000403162 PVRIGQ6DKI7 326 aa15.89■□□□□ 0.13
CCDC47-202ENST00000403162 ETFRF1Q6IPR1 90 aa15.89■□□□□ 0.13
CCDC47-202ENST00000403162 PRSS22Q9GZN4 317 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms