RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 MEF2BQ02080 365 aaPredicted RBP10.39□□□□□ -0.75
CEACAM1-206ENST00000403136 Q56UQ5 140 aa10.39□□□□□ -0.75
CEACAM1-206ENST00000403136 PQLC2Q6ZP29 291 aa10.39□□□□□ -0.75
CEACAM1-206ENST00000403136 Q6ZS46 218 aa10.39□□□□□ -0.75
CEACAM1-206ENST00000403136 CYB561D1Q8N8Q1 229 aa10.39□□□□□ -0.75
CEACAM1-206ENST00000403136 OR1B1Q8NGR6 318 aa10.39□□□□□ -0.75
CEACAM1-206ENST00000403136 ZFHX3Q15911 3703 aa10.39□□□□□ -0.75
CEACAM1-206ENST00000403136 TRAV5A0A0B4J249 113 aa10.39□□□□□ -0.75
CEACAM1-206ENST00000403136 NDUFS6O75380 124 aaKnown RBP10.39□□□□□ -0.75
CEACAM1-206ENST00000403136 CEBPGP53567 150 aa10.39□□□□□ -0.75
CEACAM1-206ENST00000403136 YPEL3P61236 119 aaPredicted RBP10.39□□□□□ -0.75
CEACAM1-206ENST00000403136 C15orf32Q32M92 178 aa10.39□□□□□ -0.75
CEACAM1-206ENST00000403136 MORN5Q5VZ52 161 aa10.39□□□□□ -0.75
CEACAM1-206ENST00000403136 LINC00305Q7Z4B0 112 aa10.39□□□□□ -0.75
CEACAM1-206ENST00000403136 NECAP1Q8NC96 275 aa10.39□□□□□ -0.75
CEACAM1-206ENST00000403136 ZNF503Q96F45 646 aa10.39□□□□□ -0.75
CEACAM1-206ENST00000403136 FAM167A-AS1Q96KT0 104 aa10.39□□□□□ -0.75
CEACAM1-206ENST00000403136 MS4A10Q96PG2 267 aa10.39□□□□□ -0.75
CEACAM1-206ENST00000403136 UHRF2Q96PU4 802 aa10.39□□□□□ -0.75
CEACAM1-206ENST00000403136 SNAPINO95295 136 aa10.38□□□□□ -0.75
CEACAM1-206ENST00000403136 TOMM40O96008 361 aa10.38□□□□□ -0.75
CEACAM1-206ENST00000403136 IGHV3-23P01764 117 aa10.38□□□□□ -0.75
CEACAM1-206ENST00000403136 UBE2G2P60604 165 aa10.38□□□□□ -0.75
CEACAM1-206ENST00000403136 OR51G1Q8NGK1 321 aa10.38□□□□□ -0.75
CEACAM1-206ENST00000403136 SLC25A2Q9BXI2 301 aa10.38□□□□□ -0.75
CEACAM1-206ENST00000403136 TMEM167BQ9NRX6 74 aa10.38□□□□□ -0.75
CEACAM1-206ENST00000403136 ZNF469Q96JG9 3925 aaPredicted RBP10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 C11orf94C9JXX5 98 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 AP4M1O00189 453 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 OR7C2O60412 319 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 CTSGP08311 255 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 PPIFP30405 207 aaKnown RBP10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 CST9LP1Q5W188 147 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 OR4F5Q8NH21 305 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 ZNF502Q8TBZ5 544 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 SUN5Q8TC36 379 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 Q8WTZ3 238 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 NOL4LQ96MY1 436 aaPredicted RBP10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 OR4F4Q96R69 305 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 TXNDC17Q9BRA2 123 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 NKX6-2Q9C056 277 aaPredicted RBP10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 MRPL27Q9P0M9 148 aaKnown RBP10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 VPREB3Q9UKI3 123 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 TMEM250H0YL14 139 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 HOXA3O43365 443 aaPredicted RBP10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 CD5LO43866 347 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 BRI3O95415 125 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 LYZP61626 148 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 KRTAP1-1Q07627 177 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 FAM90A2PQ658T7 463 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 ZNF491Q8N8L2 437 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 CLRN3Q8NCR9 226 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 OR5AU1Q8NGC0 362 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 HIGD1AQ9Y241 93 aa10.37□□□□□ -0.75
CEACAM1-206ENST00000403136 WI2-2373I1.2A0A1W2PRP0 233 aa10.36□□□□□ -0.75
CEACAM1-206ENST00000403136 OR2T8A6NH00 312 aa10.36□□□□□ -0.75
CEACAM1-206ENST00000403136 SCGB2A1O75556 95 aa10.36□□□□□ -0.75
CEACAM1-206ENST00000403136 CLEC3BP05452 202 aa10.36□□□□□ -0.75
CEACAM1-206ENST00000403136 ATP5G2Q06055 141 aa10.36□□□□□ -0.75
CEACAM1-206ENST00000403136 EEF1AKMT3Q96AZ1 226 aa10.36□□□□□ -0.75
CEACAM1-206ENST00000403136 OR51M1Q9H341 326 aa10.36□□□□□ -0.75
CEACAM1-206ENST00000403136 YTHDF2Q9Y5A9 579 aaKnown RBP10.36□□□□□ -0.75
CEACAM1-206ENST00000403136 TLN2Q9Y4G6 2542 aa10.36□□□□□ -0.75
CEACAM1-206ENST00000403136 FLNAP21333 2647 aaKnown RBP10.35□□□□□ -0.75
CEACAM1-206ENST00000403136 TRBV7-1A0A0A6YYK4 115 aa10.35□□□□□ -0.75
CEACAM1-206ENST00000403136 FAM74A7A6NL05 159 aa10.35□□□□□ -0.75
CEACAM1-206ENST00000403136 H3BUA1 57 aa10.35□□□□□ -0.75
CEACAM1-206ENST00000403136 OR2C1O95371 312 aa10.35□□□□□ -0.75
CEACAM1-206ENST00000403136 OR10J4P0C629 311 aa10.35□□□□□ -0.75
CEACAM1-206ENST00000403136 ATP5G3P48201 142 aa10.35□□□□□ -0.75
CEACAM1-206ENST00000403136 KIAA0141Q14154 515 aaPredicted RBP10.35□□□□□ -0.75
CEACAM1-206ENST00000403136 IL17RELQ6ZVW7 336 aa10.35□□□□□ -0.75
CEACAM1-206ENST00000403136 STXBP6Q8NFX7 210 aa10.35□□□□□ -0.75
CEACAM1-206ENST00000403136 RNF125Q96EQ8 232 aa10.35□□□□□ -0.75
CEACAM1-206ENST00000403136 CHRDL1Q9BU40 450 aa10.35□□□□□ -0.75
CEACAM1-206ENST00000403136 PAXXQ9BUH6 204 aa10.35□□□□□ -0.75
CEACAM1-206ENST00000403136 GAR1Q9NY12 217 aaKnown RBP10.35□□□□□ -0.75
CEACAM1-206ENST00000403136 ZNF580Q9UK33 172 aa10.35□□□□□ -0.75
CEACAM1-206ENST00000403136 PUS1Q9Y606 427 aaKnown RBP eCLIP10.35□□□□□ -0.75
CEACAM1-206ENST00000403136 ARL2-SNX15V9GYD0 113 aa10.35□□□□□ -0.75
CEACAM1-206ENST00000403136 FAM223BA6NKX1 122 aa10.34□□□□□ -0.75
CEACAM1-206ENST00000403136 H3BQ15 152 aa10.34□□□□□ -0.75
CEACAM1-206ENST00000403136 NUPL2O15504 423 aaKnown RBP10.34□□□□□ -0.75
CEACAM1-206ENST00000403136 PDE6DO43924 150 aa10.34□□□□□ -0.75
CEACAM1-206ENST00000403136 TRGV3P03979 118 aa10.34□□□□□ -0.75
CEACAM1-206ENST00000403136 IL4P05112 153 aa10.34□□□□□ -0.75
CEACAM1-206ENST00000403136 ADMP35318 185 aa10.34□□□□□ -0.75
CEACAM1-206ENST00000403136 SRP14P37108 136 aaKnown RBP10.34□□□□□ -0.75
CEACAM1-206ENST00000403136 BTN1A1Q13410 526 aa10.34□□□□□ -0.75
CEACAM1-206ENST00000403136 FAM223AQ8IWN6 122 aa10.34□□□□□ -0.75
CEACAM1-206ENST00000403136 SIGLECL1Q8N7X8 197 aa10.34□□□□□ -0.75
CEACAM1-206ENST00000403136 SLC25A39Q9BZJ4 359 aaPredicted RBP10.34□□□□□ -0.75
CEACAM1-206ENST00000403136 YAE1D1Q9NRH1 226 aa10.34□□□□□ -0.75
CEACAM1-206ENST00000403136 PYYP10082 97 aa10.34□□□□□ -0.75
CEACAM1-206ENST00000403136 NPPCP23582 126 aa10.34□□□□□ -0.75
CEACAM1-206ENST00000403136 GPR183P32249 361 aa10.34□□□□□ -0.75
CEACAM1-206ENST00000403136 CCDC140Q96MF4 163 aa10.34□□□□□ -0.75
CEACAM1-206ENST00000403136 NIPSNAP3BQ9BS92 247 aa10.34□□□□□ -0.75
CEACAM1-206ENST00000403136 NOTCH2Q04721 2471 aa10.33□□□□□ -0.76
CEACAM1-206ENST00000403136 A0A1W2PRE2 83 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms