RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 NAPSAO96009 420 aa11.22□□□□□ -0.61
LDLRAD4-203ENST00000399848 HIST1H2BJP06899 126 aa11.22□□□□□ -0.61
LDLRAD4-203ENST00000399848 HIST1H2BOP23527 126 aa11.22□□□□□ -0.61
LDLRAD4-203ENST00000399848 HIST1H2BBP33778 126 aa11.22□□□□□ -0.61
LDLRAD4-203ENST00000399848 HIST1H2BDP58876 126 aa11.22□□□□□ -0.61
LDLRAD4-203ENST00000399848 HIST1H2BCP62807 126 aa11.22□□□□□ -0.61
LDLRAD4-203ENST00000399848 HIST2H2BEQ16778 126 aa11.22□□□□□ -0.61
LDLRAD4-203ENST00000399848 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.22□□□□□ -0.61
LDLRAD4-203ENST00000399848 ZNF497Q6ZNH5 498 aa11.22□□□□□ -0.61
LDLRAD4-203ENST00000399848 HIST1H2BHQ93079 126 aa11.22□□□□□ -0.61
LDLRAD4-203ENST00000399848 HIST1H2BNQ99877 126 aa11.22□□□□□ -0.61
LDLRAD4-203ENST00000399848 HIST1H2BMQ99879 126 aa11.22□□□□□ -0.61
LDLRAD4-203ENST00000399848 Q5PR19 223 aa11.22□□□□□ -0.61
LDLRAD4-203ENST00000399848 SFTA2Q6UW10 78 aa11.22□□□□□ -0.61
LDLRAD4-203ENST00000399848 TMEM242Q9NWH2 141 aa11.22□□□□□ -0.61
LDLRAD4-203ENST00000399848 MRPS18CQ9Y3D5 142 aaKnown RBP11.22□□□□□ -0.61
LDLRAD4-203ENST00000399848 TRAV14DV4A0A0A6YYC5 116 aa11.21□□□□□ -0.61
LDLRAD4-203ENST00000399848 TDGF1P3P51864 188 aa11.21□□□□□ -0.61
LDLRAD4-203ENST00000399848 NEUROG3Q9Y4Z2 214 aa11.21□□□□□ -0.61
LDLRAD4-203ENST00000399848 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.21□□□□□ -0.61
LDLRAD4-203ENST00000399848 TRGV4A0A0C4DH28 118 aa11.21□□□□□ -0.61
LDLRAD4-203ENST00000399848 GAGE2BQ13066 116 aa11.21□□□□□ -0.61
LDLRAD4-203ENST00000399848 GAGE2EQ4V326 116 aa11.21□□□□□ -0.61
LDLRAD4-203ENST00000399848 GAGE2DQ9UEU5 116 aa11.21□□□□□ -0.61
LDLRAD4-203ENST00000399848 TRBV6-7A0A0A0MS04 114 aa11.21□□□□□ -0.61
LDLRAD4-203ENST00000399848 UMODP07911 640 aa11.21□□□□□ -0.61
LDLRAD4-203ENST00000399848 RASL11AQ6T310 242 aa11.21□□□□□ -0.61
LDLRAD4-203ENST00000399848 SPRED2Q7Z698 418 aa11.21□□□□□ -0.61
LDLRAD4-203ENST00000399848 ZNF479Q96JC4 524 aa11.21□□□□□ -0.61
LDLRAD4-203ENST00000399848 ADARB2-AS1A8MUL3 147 aa11.21□□□□□ -0.62
LDLRAD4-203ENST00000399848 ZNF562Q6V9R5 426 aa11.21□□□□□ -0.62
LDLRAD4-203ENST00000399848 GTF3AQ92664 365 aaKnown RBP11.21□□□□□ -0.62
LDLRAD4-203ENST00000399848 IFI27L1Q96BM0 104 aa11.21□□□□□ -0.62
LDLRAD4-203ENST00000399848 A0A1W2PRS3 328 aa11.21□□□□□ -0.62
LDLRAD4-203ENST00000399848 UPK2O00526 184 aa11.21□□□□□ -0.62
LDLRAD4-203ENST00000399848 JPT2Q9H910 190 aa11.21□□□□□ -0.62
LDLRAD4-203ENST00000399848 C17orf100A8MU93 164 aa11.2□□□□□ -0.62
LDLRAD4-203ENST00000399848 TSKUQ8WUA8 353 aa11.2□□□□□ -0.62
LDLRAD4-203ENST00000399848 RAMP3O60896 148 aa11.2□□□□□ -0.62
LDLRAD4-203ENST00000399848 RLFQ13129 1914 aa11.2□□□□□ -0.62
LDLRAD4-203ENST00000399848 LINC00271P0C7V0 271 aa11.2□□□□□ -0.62
LDLRAD4-203ENST00000399848 GNG5P63218 68 aa11.2□□□□□ -0.62
LDLRAD4-203ENST00000399848 PKIGQ9Y2B9 76 aa11.2□□□□□ -0.62
LDLRAD4-203ENST00000399848 RNF222A6NCQ9 220 aa11.2□□□□□ -0.62
LDLRAD4-203ENST00000399848 PPP1R32Q7Z5V6 425 aa11.2□□□□□ -0.62
LDLRAD4-203ENST00000399848 MED13Q9UHV7 2174 aa11.2□□□□□ -0.62
LDLRAD4-203ENST00000399848 PSG7Q13046 419 aa11.19□□□□□ -0.62
LDLRAD4-203ENST00000399848 FAM216BQ8N7L0 139 aa11.19□□□□□ -0.62
LDLRAD4-203ENST00000399848 PLPPR1Q8TBJ4 325 aa11.19□□□□□ -0.62
LDLRAD4-203ENST00000399848 EVI2AP22794 236 aa11.19□□□□□ -0.62
LDLRAD4-203ENST00000399848 RIPPLY3P57055 190 aa11.19□□□□□ -0.62
LDLRAD4-203ENST00000399848 COLCA1Q6ZS62 124 aa11.19□□□□□ -0.62
LDLRAD4-203ENST00000399848 SLC25A48Q6ZT89 311 aaKnown RBP11.19□□□□□ -0.62
LDLRAD4-203ENST00000399848 NRXN2Q9P2S2 1712 aa11.19□□□□□ -0.62
LDLRAD4-203ENST00000399848 LOC105371267A0A1B0GV96 52 aa11.19□□□□□ -0.62
LDLRAD4-203ENST00000399848 MORN2Q502X0 79 aa11.19□□□□□ -0.62
LDLRAD4-203ENST00000399848 TANC2Q9HCD6 1990 aa11.19□□□□□ -0.62
LDLRAD4-203ENST00000399848 EFNB3Q15768 340 aa11.19□□□□□ -0.62
LDLRAD4-203ENST00000399848 SIGLEC15Q6ZMC9 328 aa11.19□□□□□ -0.62
LDLRAD4-203ENST00000399848 GLMPQ8WWB7 406 aa11.19□□□□□ -0.62
LDLRAD4-203ENST00000399848 TMEM133Q9H2Q1 129 aa11.19□□□□□ -0.62
LDLRAD4-203ENST00000399848 IGFBP3P17936 291 aaPredicted RBP11.18□□□□□ -0.62
LDLRAD4-203ENST00000399848 OVOL1O14753 267 aa11.18□□□□□ -0.62
LDLRAD4-203ENST00000399848 LINC00158P58513 81 aa11.18□□□□□ -0.62
LDLRAD4-203ENST00000399848 RFPL3SP0C7P2 107 aa11.18□□□□□ -0.62
LDLRAD4-203ENST00000399848 GATA2P23769 480 aaPredicted RBP11.18□□□□□ -0.62
LDLRAD4-203ENST00000399848 HEPN1Q6WQI6 88 aa11.18□□□□□ -0.62
LDLRAD4-203ENST00000399848 PSG8Q9UQ74 426 aa11.18□□□□□ -0.62
LDLRAD4-203ENST00000399848 F8VVB4 439 aa11.18□□□□□ -0.62
LDLRAD4-203ENST00000399848 F8VWA3 439 aa11.18□□□□□ -0.62
LDLRAD4-203ENST00000399848 TOMM40O96008 361 aa11.18□□□□□ -0.62
LDLRAD4-203ENST00000399848 MCRIP2Q9BUT9 160 aaKnown RBP11.18□□□□□ -0.62
LDLRAD4-203ENST00000399848 IGHV3OR16-8A0A075B7F1 116 aa11.18□□□□□ -0.62
LDLRAD4-203ENST00000399848 TMEM249Q2WGJ8 235 aa11.18□□□□□ -0.62
LDLRAD4-203ENST00000399848 PRR32B1ATL7 298 aa11.18□□□□□ -0.62
LDLRAD4-203ENST00000399848 RHOGP84095 191 aa11.18□□□□□ -0.62
LDLRAD4-203ENST00000399848 PRADC1Q9BSG0 188 aa11.18□□□□□ -0.62
LDLRAD4-203ENST00000399848 RNF126Q9BV68 326 aa11.18□□□□□ -0.62
LDLRAD4-203ENST00000399848 CD5P06127 495 aa11.17□□□□□ -0.62
LDLRAD4-203ENST00000399848 MESP2Q0VG99 397 aa11.17□□□□□ -0.62
LDLRAD4-203ENST00000399848 PRCDQ00LT1 54 aa11.17□□□□□ -0.62
LDLRAD4-203ENST00000399848 A0A1B0GTI1 187 aa11.17□□□□□ -0.62
LDLRAD4-203ENST00000399848 TIAF1O95411 115 aa11.17□□□□□ -0.62
LDLRAD4-203ENST00000399848 C1QTNF9P0C862 333 aa11.17□□□□□ -0.62
LDLRAD4-203ENST00000399848 IGHV1-2P23083 117 aa11.17□□□□□ -0.62
LDLRAD4-203ENST00000399848 FAM27E3Q08E93 113 aa11.17□□□□□ -0.62
LDLRAD4-203ENST00000399848 SIGLEC12Q96PQ1 595 aa11.17□□□□□ -0.62
LDLRAD4-203ENST00000399848 CHCHD5Q9BSY4 110 aa11.17□□□□□ -0.62
LDLRAD4-203ENST00000399848 TMEM155Q4W5P6 130 aa11.17□□□□□ -0.62
LDLRAD4-203ENST00000399848 GFI1BQ5VTD9 330 aa11.17□□□□□ -0.62
LDLRAD4-203ENST00000399848 TNFRSF14Q92956 283 aa11.17□□□□□ -0.62
LDLRAD4-203ENST00000399848 HIST1H2BLQ99880 126 aa11.17□□□□□ -0.62
LDLRAD4-203ENST00000399848 TIMP3P35625 211 aa11.16□□□□□ -0.62
LDLRAD4-203ENST00000399848 PAX8Q06710 450 aa11.16□□□□□ -0.62
LDLRAD4-203ENST00000399848 SPANXA1Q9NS26 97 aa11.16□□□□□ -0.62
LDLRAD4-203ENST00000399848 TRAV8-1A0A0A6YYK1 113 aa11.16□□□□□ -0.62
LDLRAD4-203ENST00000399848 TBX6O95947 436 aaPredicted RBP11.16□□□□□ -0.62
LDLRAD4-203ENST00000399848 GATD1Q8NB37 220 aa11.16□□□□□ -0.62
LDLRAD4-203ENST00000399848 DLX4Q92988 240 aaPredicted RBP11.16□□□□□ -0.62
LDLRAD4-203ENST00000399848 MED12LQ86YW9 2145 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms