RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 EVI2AP22794 236 aa17.66■□□□□ 0.42
ANKRD28-201ENST00000399451 FNDC4Q9H6D8 234 aaPredicted RBP17.66■□□□□ 0.42
ANKRD28-201ENST00000399451 F2Z2F3 143 aa17.65■□□□□ 0.42
ANKRD28-201ENST00000399451 CLPSP04118 112 aa17.65■□□□□ 0.42
ANKRD28-201ENST00000399451 A0A0G2JNJ9 132 aa17.65■□□□□ 0.42
ANKRD28-201ENST00000399451 Q9UFV3 132 aa17.65■□□□□ 0.42
ANKRD28-201ENST00000399451 SIGLEC15Q6ZMC9 328 aa17.65■□□□□ 0.42
ANKRD28-201ENST00000399451 GREB1Q4ZG55 1949 aa17.64■□□□□ 0.41
ANKRD28-201ENST00000399451 BRD3OSQ6XYD6 125 aa17.64■□□□□ 0.41
ANKRD28-201ENST00000399451 TMEM190Q8WZ59 177 aa17.64■□□□□ 0.41
ANKRD28-201ENST00000399451 RPL35AP18077 110 aaKnown RBP17.64■□□□□ 0.41
ANKRD28-201ENST00000399451 PLSCR4Q9NRQ2 329 aa17.64■□□□□ 0.41
ANKRD28-201ENST00000399451 PPIFP30405 207 aaKnown RBP17.64■□□□□ 0.41
ANKRD28-201ENST00000399451 GFI1BQ5VTD9 330 aa17.64■□□□□ 0.41
ANKRD28-201ENST00000399451 IGHV2-26A0A0B4J1V2 119 aa17.64■□□□□ 0.41
ANKRD28-201ENST00000399451 SPATA31B1PQ5VZV4 182 aa17.64■□□□□ 0.41
ANKRD28-201ENST00000399451 SSC4DQ8WTU2 575 aa17.64■□□□□ 0.41
ANKRD28-201ENST00000399451 SLC25A20O43772 301 aa17.63■□□□□ 0.41
ANKRD28-201ENST00000399451 ORAOV1Q8WV07 137 aa17.63■□□□□ 0.41
ANKRD28-201ENST00000399451 CHCHD5Q9BSY4 110 aa17.63■□□□□ 0.41
ANKRD28-201ENST00000399451 PNRC2Q9NPJ4 139 aaKnown RBP17.63■□□□□ 0.41
ANKRD28-201ENST00000399451 RPUSD1Q9UJJ7 312 aaKnown RBP17.63■□□□□ 0.41
ANKRD28-201ENST00000399451 SRRM5B3KS81 715 aa17.63■□□□□ 0.41
ANKRD28-201ENST00000399451 SLC25A2Q9BXI2 301 aa17.63■□□□□ 0.41
ANKRD28-201ENST00000399451 HOXA3O43365 443 aaPredicted RBP17.63■□□□□ 0.41
ANKRD28-201ENST00000399451 FOXG1P55316 489 aaPredicted RBP17.63■□□□□ 0.41
ANKRD28-201ENST00000399451 FOXL1Q12952 345 aa17.63■□□□□ 0.41
ANKRD28-201ENST00000399451 MGST2Q99735 147 aa17.63■□□□□ 0.41
ANKRD28-201ENST00000399451 THADAQ6YHU6 1953 aa17.63■□□□□ 0.41
ANKRD28-201ENST00000399451 TRPM7Q96QT4 1865 aa17.62■□□□□ 0.41
ANKRD28-201ENST00000399451 OVOL1O14753 267 aa17.62■□□□□ 0.41
ANKRD28-201ENST00000399451 PSCAO43653 123 aa17.62■□□□□ 0.41
ANKRD28-201ENST00000399451 MBNL3Q9NUK0 354 aaKnown RBP17.62■□□□□ 0.41
ANKRD28-201ENST00000399451 IGHV4-39P01824 125 aa17.62■□□□□ 0.41
ANKRD28-201ENST00000399451 NMSQ5H8A3 153 aa17.62■□□□□ 0.41
ANKRD28-201ENST00000399451 SP5Q6BEB4 398 aaPredicted RBP17.62■□□□□ 0.41
ANKRD28-201ENST00000399451 H3BUX3 64 aa17.62■□□□□ 0.41
ANKRD28-201ENST00000399451 RNF182Q8N6D2 247 aa17.62■□□□□ 0.41
ANKRD28-201ENST00000399451 XIRP1Q702N8 1843 aaKnown RBP17.62■□□□□ 0.41
ANKRD28-201ENST00000399451 ASCL4Q6XD76 172 aa17.62■□□□□ 0.41
ANKRD28-201ENST00000399451 PRADC1Q9BSG0 188 aa17.62■□□□□ 0.41
ANKRD28-201ENST00000399451 MLNRO43193 412 aa17.61■□□□□ 0.41
ANKRD28-201ENST00000399451 AMBPP02760 352 aa17.61■□□□□ 0.41
ANKRD28-201ENST00000399451 IFI27L1Q96BM0 104 aa17.61■□□□□ 0.41
ANKRD28-201ENST00000399451 REG4Q9BYZ8 158 aa17.61■□□□□ 0.41
ANKRD28-201ENST00000399451 TRAV8-2A0A0B4J237 113 aa17.61■□□□□ 0.41
ANKRD28-201ENST00000399451 LHFPL4Q7Z7J7 247 aa17.61■□□□□ 0.41
ANKRD28-201ENST00000399451 ADARB2-AS1A8MUL3 147 aa17.6■□□□□ 0.41
ANKRD28-201ENST00000399451 SRSF6Q13247 344 aaKnown RBP17.6■□□□□ 0.41
ANKRD28-201ENST00000399451 LINC01356Q8N9X3 169 aa17.6■□□□□ 0.41
ANKRD28-201ENST00000399451 SEPSECSQ9HD40 501 aaKnown RBP17.6■□□□□ 0.41
ANKRD28-201ENST00000399451 TMEM95Q3KNT9 176 aa17.6■□□□□ 0.41
ANKRD28-201ENST00000399451 PAX2Q02962 417 aa17.6■□□□□ 0.41
ANKRD28-201ENST00000399451 TMEM200BQ69YZ2 307 aa17.6■□□□□ 0.41
ANKRD28-201ENST00000399451 IGKV1-5P01602 117 aa17.6■□□□□ 0.41
ANKRD28-201ENST00000399451 CD28P10747 220 aa17.6■□□□□ 0.41
ANKRD28-201ENST00000399451 HGFACQ04756 655 aa17.6■□□□□ 0.41
ANKRD28-201ENST00000399451 CD177Q8N6Q3 437 aa17.6■□□□□ 0.41
ANKRD28-201ENST00000399451 RASL11AQ6T310 242 aa17.59■□□□□ 0.41
ANKRD28-201ENST00000399451 HEATR5BQ9P2D3 2071 aa17.59■□□□□ 0.41
ANKRD28-201ENST00000399451 TNFSF13O75888 250 aa17.59■□□□□ 0.41
ANKRD28-201ENST00000399451 KLHL30-AS1Q8NEE0 82 aa17.59■□□□□ 0.41
ANKRD28-201ENST00000399451 MS4A6AQ9H2W1 248 aa17.59■□□□□ 0.41
ANKRD28-201ENST00000399451 TRIOBPQ9H2D6 2365 aa17.59■□□□□ 0.41
ANKRD28-201ENST00000399451 IGKV2-40A0A087WW87 121 aaPredicted RBP17.59■□□□□ 0.41
ANKRD28-201ENST00000399451 TRAV2A0A0B4J234 112 aa17.59■□□□□ 0.41
ANKRD28-201ENST00000399451 PSPNO60542 156 aa17.59■□□□□ 0.41
ANKRD28-201ENST00000399451 IGKV2D-40P01614 121 aaPredicted RBP17.59■□□□□ 0.41
ANKRD28-201ENST00000399451 GZMBP10144 247 aa17.59■□□□□ 0.41
ANKRD28-201ENST00000399451 HSD52Q0P140 79 aa17.59■□□□□ 0.41
ANKRD28-201ENST00000399451 SLC25A48Q6ZT89 311 aaKnown RBP17.59■□□□□ 0.41
ANKRD28-201ENST00000399451 AGMATQ9BSE5 352 aa17.59■□□□□ 0.41
ANKRD28-201ENST00000399451 TMEM8BA6NDV4 472 aa17.58■□□□□ 0.41
ANKRD28-201ENST00000399451 TMEM178BH3BS89 294 aa17.58■□□□□ 0.41
ANKRD28-201ENST00000399451 ACTL10Q5JWF8 245 aa17.58■□□□□ 0.41
ANKRD28-201ENST00000399451 TMEM14EPQ6UXP3 125 aa17.58■□□□□ 0.41
ANKRD28-201ENST00000399451 LINC01551Q86U37 167 aa17.58■□□□□ 0.41
ANKRD28-201ENST00000399451 KIR3DL3Q8N743 410 aa17.58■□□□□ 0.41
ANKRD28-201ENST00000399451 MSRB2Q9Y3D2 182 aa17.58■□□□□ 0.41
ANKRD28-201ENST00000399451 TPTE2P1Q5T6R2 138 aa17.58■□□□□ 0.41
ANKRD28-201ENST00000399451 SLC25A39Q9BZJ4 359 aaPredicted RBP17.58■□□□□ 0.41
ANKRD28-201ENST00000399451 SNRNP200O75643 2136 aaKnown RBP17.58■□□□□ 0.41
ANKRD28-201ENST00000399451 SLC25A16P16260 332 aa17.58■□□□□ 0.4
ANKRD28-201ENST00000399451 C10orf55Q5SWW7 151 aa17.58■□□□□ 0.4
ANKRD28-201ENST00000399451 TET1Q8NFU7 2136 aa17.58■□□□□ 0.4
ANKRD28-201ENST00000399451 GBF1Q92538 1859 aa17.58■□□□□ 0.4
ANKRD28-201ENST00000399451 NPIPB5A8MRT5 1133 aa17.58■□□□□ 0.4
ANKRD28-201ENST00000399451 IGHV1-8P0DP01 117 aa17.58■□□□□ 0.4
ANKRD28-201ENST00000399451 LAGE3Q14657 143 aa17.58■□□□□ 0.4
ANKRD28-201ENST00000399451 MEGF9Q9H1U4 602 aa17.58■□□□□ 0.4
ANKRD28-201ENST00000399451 SFTA2Q6UW10 78 aa17.57■□□□□ 0.4
ANKRD28-201ENST00000399451 SPOCK3Q9BQ16 436 aa17.57■□□□□ 0.4
ANKRD28-201ENST00000399451 C11orf68Q9H3H3 251 aaKnown RBP17.57■□□□□ 0.4
ANKRD28-201ENST00000399451 CRIM1Q9NZV1 1036 aa17.57■□□□□ 0.4
ANKRD28-201ENST00000399451 SMPXQ9UHP9 88 aa17.57■□□□□ 0.4
ANKRD28-201ENST00000399451 QRFPP83859 136 aa17.57■□□□□ 0.4
ANKRD28-201ENST00000399451 LCNL1Q6ZST4 164 aa17.57■□□□□ 0.4
ANKRD28-201ENST00000399451 RNF114Q9Y508 228 aa17.57■□□□□ 0.4
ANKRD28-201ENST00000399451 PMS2P5A8MQ11 134 aa17.57■□□□□ 0.4
ANKRD28-201ENST00000399451 SEC11AP67812 179 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms