RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ZCCHC24Q8N2G6 241 aaKnown RBP4.94□□□□□ -1.62
TRAPPC13-202ENST00000399438 FAM24BQ8N5W8 94 aa4.94□□□□□ -1.62
TRAPPC13-202ENST00000399438 DEFB108BQ8NET1 73 aa4.94□□□□□ -1.62
TRAPPC13-202ENST00000399438 LINC00470Q9BZP3 86 aa4.94□□□□□ -1.62
TRAPPC13-202ENST00000399438 CACNG5Q9UF02 275 aa4.94□□□□□ -1.62
TRAPPC13-202ENST00000399438 CORTO00230 105 aa4.94□□□□□ -1.62
TRAPPC13-202ENST00000399438 CCL25O15444 150 aa4.94□□□□□ -1.62
TRAPPC13-202ENST00000399438 HIST1H2BAQ96A08 127 aa4.94□□□□□ -1.62
TRAPPC13-202ENST00000399438 ABHD14BQ96IU4 210 aa4.94□□□□□ -1.62
TRAPPC13-202ENST00000399438 CST9LQ9H4G1 147 aa4.94□□□□□ -1.62
TRAPPC13-202ENST00000399438 MMP26Q9NRE1 261 aa4.94□□□□□ -1.62
TRAPPC13-202ENST00000399438 TMEM189A5PLL7 270 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 ZFP92A6NM28 416 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 RPL36A-HNRNPH2H7BZ11 118 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 K7EM74 188 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 M0R143 59 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 OR2H2O95918 312 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 IGHV1-2P23083 117 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 COL8A1P27658 744 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 BRWD1-AS2P59051 145 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 RPS28P62857 69 aaKnown RBP4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 SPANXN5Q5MJ07 72 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 Q6ZR03 302 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 LRP11Q86VZ4 500 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 TGIF2LYQ8IUE0 185 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 NEXN-AS1Q8NBZ9 246 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 MRPL30Q8TCC3 161 aaKnown RBP4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 ESM1Q9NQ30 184 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 ZNRD1Q9P1U0 126 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 ANKHD1Q8IWZ3 2542 aaKnown RBP4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 CELSR1Q9NYQ6 3014 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 UMAD1C9J7I0 102 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 PGLYRP1O75594 196 aaPredicted RBP4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 PRB4P10163 310 aaPredicted RBP4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 HIST1H1BP16401 226 aaKnown RBP4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 GABRA2P47869 451 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 UBE2NP61088 152 aaKnown RBP4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 FGF12P61328 243 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 PEA15Q15121 130 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 MPV17LQ2QL34 196 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 OR13A1Q8NGR1 328 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 ORAOV1Q8WV07 137 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 GPR146Q96CH1 333 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 C18orf12Q96KH6 178 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 KIR2DL4Q99706 377 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 NDFIP1Q9BT67 221 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 MAP6D1Q9H9H5 199 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 CACNA1AO00555 2505 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 A0A0G2JLM5 398 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 A0A1B0GX51 115 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 AZU1P20160 251 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 GNLYP22749 145 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 FKBP2P26885 142 aaKnown RBP4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 SRIP30626 198 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 G6PCP35575 357 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 PSG7Q13046 419 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 PMVKQ15126 192 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 TMEM30BQ3MIR4 351 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 ODF3L1Q8IXM7 274 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 TMEM252Q8N6L7 170 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 C9orf106Q8NAJ2 232 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 OR5P3Q8WZ94 311 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 PHYHIPLQ96FC7 376 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 GMPPAQ96IJ6 420 aaPredicted RBP4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 TMEM204Q9BSN7 226 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 TMEM222Q9H0R3 208 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 TMEM100Q9NV29 134 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 MED9Q9NWA0 146 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 ZNF257Q9Y2Q1 563 aa4.93□□□□□ -1.62
TRAPPC13-202ENST00000399438 HPRT1P00492 218 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 IGKV1-39P01597 117 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 IGKV1D-39P04432 117 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 SNRPCP09234 159 aaKnown RBP4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 ZNF83P51522 516 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 PCSK4Q6UW60 755 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 SNHG12Q9BXW3 62 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 TMPRSS5Q9H3S3 457 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 TAAR3PQ9P1P4 343 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 GNG13Q9P2W3 67 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 NAV3Q8IVL0 2385 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 C7orf77A4D0Y5 90 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 JTBO76095 146 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 KBTBD11O94819 623 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 OR5G3P0C626 314 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 MDH2P40926 338 aaKnown RBP4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 CYB561D1Q8N8Q1 229 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 OR51G1Q8NGK1 321 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 TMEM101Q96IK0 257 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 SMIM8Q96KF7 97 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 FAM19A4Q96LR4 140 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 OR2D2Q9H210 308 aa4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 LYRM2Q9NU23 88 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC13-202ENST00000399438 BORCS7-ASMTA0A0B4J1R7 106 aa4.91□□□□□ -1.62
TRAPPC13-202ENST00000399438 UBE2L5PA0A1B0GUS4 154 aa4.91□□□□□ -1.62
TRAPPC13-202ENST00000399438 F6UB75 175 aa4.91□□□□□ -1.62
TRAPPC13-202ENST00000399438 H7C1H1 209 aa4.91□□□□□ -1.62
TRAPPC13-202ENST00000399438 MMP23AO75900 390 aa4.91□□□□□ -1.62
TRAPPC13-202ENST00000399438 NAPSAO96009 420 aa4.91□□□□□ -1.62
TRAPPC13-202ENST00000399438 PRTN3P24158 256 aa4.91□□□□□ -1.62
TRAPPC13-202ENST00000399438 RPL30P62888 115 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms