RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 DTX2Q86UW9 622 aa11.01□□□□□ -0.65
PRAME-202ENST00000398743 RASL11BQ9BPW5 248 aa11.01□□□□□ -0.65
PRAME-202ENST00000398743 EPDR1Q9UM22 224 aa11.01□□□□□ -0.65
PRAME-202ENST00000398743 HIGD1AQ9Y241 93 aa11.01□□□□□ -0.65
PRAME-202ENST00000398743 TRAV34A0A0B4J273 112 aa11□□□□□ -0.65
PRAME-202ENST00000398743 PGPA6NDG6 321 aa11□□□□□ -0.65
PRAME-202ENST00000398743 TSTD3H0UI37 97 aa11□□□□□ -0.65
PRAME-202ENST00000398743 GATCO43716 136 aaKnown RBP11□□□□□ -0.65
PRAME-202ENST00000398743 SPINK4O60575 86 aa11□□□□□ -0.65
PRAME-202ENST00000398743 SLC25A5P05141 298 aaKnown RBP11□□□□□ -0.65
PRAME-202ENST00000398743 FRMD6-AS1P0C7T7 363 aa11□□□□□ -0.65
PRAME-202ENST00000398743 PSG1P11464 419 aa11□□□□□ -0.65
PRAME-202ENST00000398743 CRISP2P16562 243 aa11□□□□□ -0.65
PRAME-202ENST00000398743 PKIAP61925 76 aa11□□□□□ -0.65
PRAME-202ENST00000398743 GNG5P63218 68 aa11□□□□□ -0.65
PRAME-202ENST00000398743 TMEM183BQ1AE95 376 aa11□□□□□ -0.65
PRAME-202ENST00000398743 FAM231DQ6ZW35 169 aa11□□□□□ -0.65
PRAME-202ENST00000398743 LHFPL4Q7Z7J7 247 aa11□□□□□ -0.65
PRAME-202ENST00000398743 TACC2O95359 2948 aa11□□□□□ -0.65
PRAME-202ENST00000398743 NDUFA3O95167 84 aa11□□□□□ -0.65
PRAME-202ENST00000398743 GPR6P46095 362 aaPredicted RBP11□□□□□ -0.65
PRAME-202ENST00000398743 LYZP61626 148 aa11□□□□□ -0.65
PRAME-202ENST00000398743 NPBQ8NG41 125 aa11□□□□□ -0.65
PRAME-202ENST00000398743 CMTM2Q8TAZ6 248 aa11□□□□□ -0.65
PRAME-202ENST00000398743 NAT8BQ9UHF3 227 aa11□□□□□ -0.65
PRAME-202ENST00000398743 SLC35B1P78383 322 aa10.99□□□□□ -0.65
PRAME-202ENST00000398743 LEMD1Q68G75 181 aa10.99□□□□□ -0.65
PRAME-202ENST00000398743 HRNRQ86YZ3 2850 aaPredicted RBP10.99□□□□□ -0.65
PRAME-202ENST00000398743 NUPR1O60356 82 aa10.99□□□□□ -0.65
PRAME-202ENST00000398743 CA1P00915 261 aaPredicted RBP10.99□□□□□ -0.65
PRAME-202ENST00000398743 HES1Q14469 280 aa10.99□□□□□ -0.65
PRAME-202ENST00000398743 SMIM12Q96EX1 92 aa10.99□□□□□ -0.65
PRAME-202ENST00000398743 ATG101Q9BSB4 218 aa10.99□□□□□ -0.65
PRAME-202ENST00000398743 ZMAT5Q9UDW3 170 aaKnown RBP10.99□□□□□ -0.65
PRAME-202ENST00000398743 TP53TG3Q9ULZ0 132 aa10.99□□□□□ -0.65
PRAME-202ENST00000398743 PLXNB1O43157 2135 aa10.98□□□□□ -0.65
PRAME-202ENST00000398743 A0A1W2PRD5 423 aa10.98□□□□□ -0.65
PRAME-202ENST00000398743 A0A1W2PRF3 423 aa10.98□□□□□ -0.65
PRAME-202ENST00000398743 A0A1W2PRM7 423 aa10.98□□□□□ -0.65
PRAME-202ENST00000398743 AMY1AP04745 511 aa10.98□□□□□ -0.65
PRAME-202ENST00000398743 CD24P25063 80 aa10.98□□□□□ -0.65
PRAME-202ENST00000398743 ZNF600Q6ZNG1 722 aa10.98□□□□□ -0.65
PRAME-202ENST00000398743 TMEM136Q6ZRR5 245 aa10.98□□□□□ -0.65
PRAME-202ENST00000398743 C1orf122Q6ZSJ8 110 aa10.98□□□□□ -0.65
PRAME-202ENST00000398743 C5orf17Q8NAS9 161 aa10.98□□□□□ -0.65
PRAME-202ENST00000398743 CHRDL1Q9BU40 450 aa10.98□□□□□ -0.65
PRAME-202ENST00000398743 SLC25A39Q9BZJ4 359 aaPredicted RBP10.98□□□□□ -0.65
PRAME-202ENST00000398743 RPH3ALQ9UNE2 315 aa10.98□□□□□ -0.65
PRAME-202ENST00000398743 KLF12Q9Y4X4 402 aa10.98□□□□□ -0.65
PRAME-202ENST00000398743 IZUMO1RA6ND01 250 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 K7EIM0 57 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 DEFA6Q01524 100 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 Q0VG73 95 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 LY6DQ14210 128 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 IQCJQ1A5X6 159 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 PRR27Q6MZM9 219 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 CCDC144NLQ6NUI1 221 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 MRPL54Q6P161 138 aaKnown RBP10.97□□□□□ -0.65
PRAME-202ENST00000398743 VMO1Q7Z5L0 202 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 KIR3DL3Q8N743 410 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 FAM168AQ92567 244 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 FAM103A1Q9BTL3 118 aaKnown RBP10.97□□□□□ -0.65
PRAME-202ENST00000398743 Q9H3A6 140 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 TPRP12270 2363 aaKnown RBP10.97□□□□□ -0.65
PRAME-202ENST00000398743 IGKV1-17P01599 117 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 HLA-DQA1P01909 254 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 HIST1H1EP10412 219 aaKnown RBP10.97□□□□□ -0.65
PRAME-202ENST00000398743 ESDP10768 282 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 CDKN1AP38936 164 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 RAB4BP61018 213 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 C5orf64Q2M2E5 130 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 BAGE3Q86Y29 109 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 NUDT10Q8NFP7 164 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 IGFBPL1Q8WX77 278 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 MBD6Q96DN6 1003 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 NUDT11Q96G61 164 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 GRAMD2BQ96HH9 432 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 GPR82Q96P67 336 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 PRO1933Q9H354 126 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 TMEM14CQ9P0S9 112 aa10.97□□□□□ -0.65
PRAME-202ENST00000398743 A0A1W2PPR1 153 aa10.96□□□□□ -0.65
PRAME-202ENST00000398743 SERF1AO75920 110 aa10.96□□□□□ -0.65
PRAME-202ENST00000398743 SFTPCP11686 197 aa10.96□□□□□ -0.65
PRAME-202ENST00000398743 TPPP2P59282 170 aa10.96□□□□□ -0.65
PRAME-202ENST00000398743 PAFAH1B2P68402 229 aa10.96□□□□□ -0.65
PRAME-202ENST00000398743 USF2Q15853 346 aaPredicted RBP10.96□□□□□ -0.65
PRAME-202ENST00000398743 ASPHD1Q5U4P2 390 aa10.96□□□□□ -0.65
PRAME-202ENST00000398743 FMC1Q96HJ9 113 aa10.96□□□□□ -0.65
PRAME-202ENST00000398743 MS4A10Q96PG2 267 aa10.96□□□□□ -0.65
PRAME-202ENST00000398743 RBM14Q96PK6 669 aaKnown RBP10.96□□□□□ -0.65
PRAME-202ENST00000398743 C7orf69Q9H7B7 122 aa10.96□□□□□ -0.65
PRAME-202ENST00000398743 MRPL27Q9P0M9 148 aaKnown RBP10.96□□□□□ -0.65
PRAME-202ENST00000398743 H3BTX0 84 aa10.96□□□□□ -0.66
PRAME-202ENST00000398743 TCRAP04437 139 aa10.96□□□□□ -0.66
PRAME-202ENST00000398743 DDTP30046 118 aa10.96□□□□□ -0.66
PRAME-202ENST00000398743 LINC00310P59036 64 aa10.96□□□□□ -0.66
PRAME-202ENST00000398743 SGK494Q96LW2 274 aa10.96□□□□□ -0.66
PRAME-202ENST00000398743 ZNF331Q9NQX6 463 aaPredicted RBP10.96□□□□□ -0.66
PRAME-202ENST00000398743 OOSP1A8MZH6 123 aa10.95□□□□□ -0.66
PRAME-202ENST00000398743 TOMM40O96008 361 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms