RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 EIF4E3Q8N5X7 224 aaKnown RBP8.79□□□□□ -1
TFF3-202ENST00000398431 OR1P1Q8NH06 330 aa8.79□□□□□ -1
TFF3-202ENST00000398431 MARCH1Q8TCQ1 289 aa8.79□□□□□ -1
TFF3-202ENST00000398431 PPP1R1CQ8WVI7 109 aa8.79□□□□□ -1
TFF3-202ENST00000398431 ST8SIA2Q92186 375 aa8.79□□□□□ -1
TFF3-202ENST00000398431 C11orf68Q9H3H3 251 aaKnown RBP8.79□□□□□ -1
TFF3-202ENST00000398431 TMEM14BQ9NUH8 114 aa8.79□□□□□ -1
TFF3-202ENST00000398431 GPR132Q9UNW8 380 aa8.79□□□□□ -1
TFF3-202ENST00000398431 TMA7Q9Y2S6 64 aaKnown RBP8.79□□□□□ -1
TFF3-202ENST00000398431 IGKV3-7A0A075B6H7 116 aa8.78□□□□□ -1
TFF3-202ENST00000398431 TEX46H3BTG2 121 aa8.78□□□□□ -1
TFF3-202ENST00000398431 DEFB4AO15263 64 aa8.78□□□□□ -1
TFF3-202ENST00000398431 IFNA21P01568 189 aa8.78□□□□□ -1
TFF3-202ENST00000398431 IGHV3-48P01763 117 aa8.78□□□□□ -1
TFF3-202ENST00000398431 APOHP02749 345 aaPredicted RBP8.78□□□□□ -1
TFF3-202ENST00000398431 PGAM2P15259 253 aa8.78□□□□□ -1
TFF3-202ENST00000398431 EIF5AL1Q6IS14 154 aaKnown RBP8.78□□□□□ -1
TFF3-202ENST00000398431 SEC22AQ96IW7 307 aa8.78□□□□□ -1
TFF3-202ENST00000398431 TMEM56Q96MV1 263 aa8.78□□□□□ -1
TFF3-202ENST00000398431 ZNF471Q9BX82 626 aaPredicted RBP8.78□□□□□ -1
TFF3-202ENST00000398431 FBXL17Q9UF56 701 aa8.78□□□□□ -1
TFF3-202ENST00000398431 PRNDQ9UKY0 176 aa8.78□□□□□ -1
TFF3-202ENST00000398431 APLNQ9ULZ1 77 aa8.78□□□□□ -1
TFF3-202ENST00000398431 AGRNO00468 2067 aa8.77□□□□□ -1
TFF3-202ENST00000398431 GPR31O00270 319 aa8.77□□□□□ -1.01
TFF3-202ENST00000398431 NUPL2O15504 423 aaKnown RBP8.77□□□□□ -1.01
TFF3-202ENST00000398431 YIF1AO95070 293 aa8.77□□□□□ -1.01
TFF3-202ENST00000398431 IGKV1-39P01597 117 aa8.77□□□□□ -1.01
TFF3-202ENST00000398431 RLN2P04090 185 aa8.77□□□□□ -1.01
TFF3-202ENST00000398431 IGKV1D-39P04432 117 aa8.77□□□□□ -1.01
TFF3-202ENST00000398431 IFNA4P05014 189 aa8.77□□□□□ -1.01
TFF3-202ENST00000398431 TPT1P13693 172 aaKnown RBP8.77□□□□□ -1.01
TFF3-202ENST00000398431 PI3P19957 117 aa8.77□□□□□ -1.01
TFF3-202ENST00000398431 MFAP4P55083 255 aa8.77□□□□□ -1.01
TFF3-202ENST00000398431 RND3P61587 244 aa8.77□□□□□ -1.01
TFF3-202ENST00000398431 RELQ04864 619 aaPredicted RBP8.77□□□□□ -1.01
TFF3-202ENST00000398431 SMCO1Q147U7 214 aa8.77□□□□□ -1.01
TFF3-202ENST00000398431 LRRC37A5PQ49AS3 106 aa8.77□□□□□ -1.01
TFF3-202ENST00000398431 FAM24BQ8N5W8 94 aa8.77□□□□□ -1.01
TFF3-202ENST00000398431 TMEM230Q96A57 120 aa8.77□□□□□ -1.01
TFF3-202ENST00000398431 C2orf50Q96LR7 162 aa8.77□□□□□ -1.01
TFF3-202ENST00000398431 TXN2Q99757 166 aa8.77□□□□□ -1.01
TFF3-202ENST00000398431 RTBDNQ9BSG5 229 aaPredicted RBP8.77□□□□□ -1.01
TFF3-202ENST00000398431 VSIRQ9H7M9 311 aa8.77□□□□□ -1.01
TFF3-202ENST00000398431 KCNIP3Q9Y2W7 256 aa8.77□□□□□ -1.01
TFF3-202ENST00000398431 C15orf61A6NNL5 157 aa8.76□□□□□ -1.01
TFF3-202ENST00000398431 CCSO14618 274 aa8.76□□□□□ -1.01
TFF3-202ENST00000398431 TAAR5O14804 337 aa8.76□□□□□ -1.01
TFF3-202ENST00000398431 MT-CO2P00403 227 aa8.76□□□□□ -1.01
TFF3-202ENST00000398431 GIG44P09565 113 aaPredicted RBP8.76□□□□□ -1.01
TFF3-202ENST00000398431 UQCC3Q6UW78 93 aa8.76□□□□□ -1.01
TFF3-202ENST00000398431 TOMM20LQ6UXN7 152 aa8.76□□□□□ -1.01
TFF3-202ENST00000398431 TCF24Q7RTU0 167 aa8.76□□□□□ -1.01
TFF3-202ENST00000398431 C2CD4CQ8TF44 421 aa8.76□□□□□ -1.01
TFF3-202ENST00000398431 MISP3Q96FF7 219 aa8.76□□□□□ -1.01
TFF3-202ENST00000398431 FKBP11Q9NYL4 201 aa8.76□□□□□ -1.01
TFF3-202ENST00000398431 TEX13DA0A0J9YY54 714 aaPredicted RBP8.75□□□□□ -1.01
TFF3-202ENST00000398431 DFFBO76075 338 aa8.75□□□□□ -1.01
TFF3-202ENST00000398431 CA1P00915 261 aaPredicted RBP8.75□□□□□ -1.01
TFF3-202ENST00000398431 RBMY1A1P0DJD3 496 aaKnown RBP8.75□□□□□ -1.01
TFF3-202ENST00000398431 RBMY1CP0DJD4 496 aa8.75□□□□□ -1.01
TFF3-202ENST00000398431 TCTAP57738 103 aa8.75□□□□□ -1.01
TFF3-202ENST00000398431 DEFB131AP59861 70 aa8.75□□□□□ -1.01
TFF3-202ENST00000398431 TMEM187Q14656 261 aa8.75□□□□□ -1.01
TFF3-202ENST00000398431 RBMY1FQ15415 496 aaKnown RBP8.75□□□□□ -1.01
TFF3-202ENST00000398431 PHLDA2Q53GA4 152 aa8.75□□□□□ -1.01
TFF3-202ENST00000398431 LEMD1Q68G75 181 aa8.75□□□□□ -1.01
TFF3-202ENST00000398431 PRSS54Q6PEW0 395 aa8.75□□□□□ -1.01
TFF3-202ENST00000398431 Q8NAQ8 132 aa8.75□□□□□ -1.01
TFF3-202ENST00000398431 ZNF114Q8NC26 417 aa8.75□□□□□ -1.01
TFF3-202ENST00000398431 PCNPQ8WW12 178 aaKnown RBP8.75□□□□□ -1.01
TFF3-202ENST00000398431 MS4A6AQ9H2W1 248 aa8.75□□□□□ -1.01
TFF3-202ENST00000398431 ZFAND3Q9H8U3 227 aa8.75□□□□□ -1.01
TFF3-202ENST00000398431 FAM212BQ9NTI7 297 aaPredicted RBP8.75□□□□□ -1.01
TFF3-202ENST00000398431 MBD2Q9UBB5 411 aa8.75□□□□□ -1.01
TFF3-202ENST00000398431 PIGBOS1A0A0B4J2F0 54 aa8.74□□□□□ -1.01
TFF3-202ENST00000398431 RAB19A4D1S5 217 aa8.74□□□□□ -1.01
TFF3-202ENST00000398431 CRYM-AS1A6NIL9 109 aa8.74□□□□□ -1.01
TFF3-202ENST00000398431 IGLL5B9A064 214 aa8.74□□□□□ -1.01
TFF3-202ENST00000398431 PIGPP57054 158 aa8.74□□□□□ -1.01
TFF3-202ENST00000398431 HSPE1P61604 102 aaKnown RBP8.74□□□□□ -1.01
TFF3-202ENST00000398431 SUPT4H1P63272 117 aaKnown RBP8.74□□□□□ -1.01
TFF3-202ENST00000398431 PAFAH1B2P68402 229 aa8.74□□□□□ -1.01
TFF3-202ENST00000398431 PRCDQ00LT1 54 aa8.74□□□□□ -1.01
TFF3-202ENST00000398431 PVRIGQ6DKI7 326 aa8.74□□□□□ -1.01
TFF3-202ENST00000398431 TBC1D26Q86UD7 250 aa8.74□□□□□ -1.01
TFF3-202ENST00000398431 CMTM1Q8IZ96 169 aa8.74□□□□□ -1.01
TFF3-202ENST00000398431 OR1S1Q8NH92 325 aa8.74□□□□□ -1.01
TFF3-202ENST00000398431 STOML3Q8TAV4 291 aa8.74□□□□□ -1.01
TFF3-202ENST00000398431 RNF141Q8WVD5 230 aa8.74□□□□□ -1.01
TFF3-202ENST00000398431 DNAH6Q9C0G6 4158 aa8.74□□□□□ -1.01
TFF3-202ENST00000398431 TRAV2A0A0B4J234 112 aa8.73□□□□□ -1.01
TFF3-202ENST00000398431 IGHV3-66A0A0C4DH42 116 aa8.73□□□□□ -1.01
TFF3-202ENST00000398431 A0A1B0GU03 582 aa8.73□□□□□ -1.01
TFF3-202ENST00000398431 RNF222A6NCQ9 220 aa8.73□□□□□ -1.01
TFF3-202ENST00000398431 GNG7O60262 68 aa8.73□□□□□ -1.01
TFF3-202ENST00000398431 TMEM50AO95807 157 aa8.73□□□□□ -1.01
TFF3-202ENST00000398431 CD5P06127 495 aa8.73□□□□□ -1.01
TFF3-202ENST00000398431 IZUMO4Q1ZYL8 232 aa8.73□□□□□ -1.01
TFF3-202ENST00000398431 BAP18Q8IXM2 172 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms