RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ZFAND1Q8TCF1 268 aa6.26□□□□□ -1.41
CAPN3-208ENST00000397204 TP53RKQ96S44 253 aa6.26□□□□□ -1.41
CAPN3-208ENST00000397204 NRN1Q9NPD7 142 aa6.26□□□□□ -1.41
CAPN3-208ENST00000397204 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.26□□□□□ -1.41
CAPN3-208ENST00000397204 HSPG2P98160 4391 aa6.26□□□□□ -1.41
CAPN3-208ENST00000397204 LRP1BQ9NZR2 4599 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 TEX48A0A1B0GUV7 120 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 ZNF705FA8MVS1 300 aaPredicted RBP6.25□□□□□ -1.41
CAPN3-208ENST00000397204 BUB3O43684 328 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 CD74P04233 296 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 ZNF705DP0CH99 300 aaPredicted RBP6.25□□□□□ -1.41
CAPN3-208ENST00000397204 ZNF705BP0CI00 300 aaPredicted RBP6.25□□□□□ -1.41
CAPN3-208ENST00000397204 HLA-DRB4P13762 266 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 OR10J1P30954 320 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 TGFBR1P36897 503 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 NKX2-1P43699 371 aaPredicted RBP6.25□□□□□ -1.41
CAPN3-208ENST00000397204 DHODHQ02127 395 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 OXA1LQ15070 435 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 TRIM16LQ309B1 348 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 C2orf83Q53S99 150 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 ETFRF1Q6IPR1 90 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 MZT2BQ6NZ67 158 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 PRSS54Q6PEW0 395 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 ZNF705AQ6ZN79 300 aaPredicted RBP6.25□□□□□ -1.41
CAPN3-208ENST00000397204 NOXA1Q86UR1 476 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 LHFPL1Q86WI0 220 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 SNX29P2Q8IUI4 249 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 FAM219AQ8IW50 185 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 ARRDC1Q8N5I2 433 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 TERB2Q8NHR7 220 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 RNASEH2CQ8TDP1 164 aaKnown RBP6.25□□□□□ -1.41
CAPN3-208ENST00000397204 CLUHP3Q96NS8 147 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 SCRT1Q9BWW7 348 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 HEYLQ9NQ87 328 aaPredicted RBP6.25□□□□□ -1.41
CAPN3-208ENST00000397204 COPZ2Q9P299 210 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 COMMD3Q9UBI1 195 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 HLA-DRB4X5D2U9 266 aa6.25□□□□□ -1.41
CAPN3-208ENST00000397204 M0QYG6 137 aa6.24□□□□□ -1.41
CAPN3-208ENST00000397204 GSTZ1O43708 216 aaPredicted RBP6.24□□□□□ -1.41
CAPN3-208ENST00000397204 CDS2O95674 445 aa6.24□□□□□ -1.41
CAPN3-208ENST00000397204 RD3LP0DJH9 198 aa6.24□□□□□ -1.41
CAPN3-208ENST00000397204 TBPP20226 339 aa6.24□□□□□ -1.41
CAPN3-208ENST00000397204 UCP1P25874 307 aa6.24□□□□□ -1.41
CAPN3-208ENST00000397204 RND2P52198 227 aa6.24□□□□□ -1.41
CAPN3-208ENST00000397204 SP6Q3SY56 376 aa6.24□□□□□ -1.41
CAPN3-208ENST00000397204 RNASE10Q5GAN6 216 aaKnown RBP6.24□□□□□ -1.41
CAPN3-208ENST00000397204 TEPPQ6URK8 271 aa6.24□□□□□ -1.41
CAPN3-208ENST00000397204 SIGLEC15Q6ZMC9 328 aa6.24□□□□□ -1.41
CAPN3-208ENST00000397204 Q6ZRM9 215 aa6.24□□□□□ -1.41
CAPN3-208ENST00000397204 UBE2DNLQ8IWF7 75 aa6.24□□□□□ -1.41
CAPN3-208ENST00000397204 CCDC71LQ8N9Z2 235 aa6.24□□□□□ -1.41
CAPN3-208ENST00000397204 KLK11Q9UBX7 282 aa6.24□□□□□ -1.41
CAPN3-208ENST00000397204 CACFD1Q9UGQ2 172 aa6.24□□□□□ -1.41
CAPN3-208ENST00000397204 RFNGQ9Y644 331 aa6.24□□□□□ -1.41
CAPN3-208ENST00000397204 A0A0G2JRQ6 117 aa6.23□□□□□ -1.41
CAPN3-208ENST00000397204 ATP6V1G2O95670 118 aa6.23□□□□□ -1.41
CAPN3-208ENST00000397204 TOMM40O96008 361 aa6.23□□□□□ -1.41
CAPN3-208ENST00000397204 CD3DP04234 171 aa6.23□□□□□ -1.41
CAPN3-208ENST00000397204 IL4P05112 153 aa6.23□□□□□ -1.41
CAPN3-208ENST00000397204 ELK1P19419 428 aa6.23□□□□□ -1.41
CAPN3-208ENST00000397204 NUP62P37198 522 aaPredicted RBP6.23□□□□□ -1.41
CAPN3-208ENST00000397204 ID1P41134 155 aa6.23□□□□□ -1.41
CAPN3-208ENST00000397204 EMP1P54849 157 aa6.23□□□□□ -1.41
CAPN3-208ENST00000397204 LSM3P62310 102 aaKnown RBP6.23□□□□□ -1.41
CAPN3-208ENST00000397204 USF2Q15853 346 aaPredicted RBP6.23□□□□□ -1.41
CAPN3-208ENST00000397204 C1orf134Q5TEV5 83 aa6.23□□□□□ -1.41
CAPN3-208ENST00000397204 SPATA31B1PQ5VZV4 182 aa6.23□□□□□ -1.41
CAPN3-208ENST00000397204 RNASE11Q8TAA1 199 aaKnown RBP6.23□□□□□ -1.41
CAPN3-208ENST00000397204 NPIPB3Q92617 1050 aa6.23□□□□□ -1.41
CAPN3-208ENST00000397204 YIPF6Q96EC8 236 aa6.23□□□□□ -1.41
CAPN3-208ENST00000397204 ABHD1Q96SE0 405 aa6.23□□□□□ -1.41
CAPN3-208ENST00000397204 NIPSNAP3BQ9BS92 247 aa6.23□□□□□ -1.41
CAPN3-208ENST00000397204 TMEM222Q9H0R3 208 aa6.23□□□□□ -1.41
CAPN3-208ENST00000397204 DKK2Q9UBU2 259 aa6.23□□□□□ -1.41
CAPN3-208ENST00000397204 IGLV2-18A0A075B6J9 118 aa6.22□□□□□ -1.41
CAPN3-208ENST00000397204 CEBPZOSA8MTT3 80 aa6.22□□□□□ -1.41
CAPN3-208ENST00000397204 FAM3BP58499 235 aaPredicted RBP6.22□□□□□ -1.41
CAPN3-208ENST00000397204 CTAG1AP78358 180 aa6.22□□□□□ -1.41
CAPN3-208ENST00000397204 FOXI2Q6ZQN5 318 aa6.22□□□□□ -1.41
CAPN3-208ENST00000397204 OR51G1Q8NGK1 321 aa6.22□□□□□ -1.41
CAPN3-208ENST00000397204 SUN5Q8TC36 379 aa6.22□□□□□ -1.41
CAPN3-208ENST00000397204 GLYATL2Q8WU03 294 aa6.22□□□□□ -1.41
CAPN3-208ENST00000397204 C15orf40Q8WUR7 153 aa6.22□□□□□ -1.41
CAPN3-208ENST00000397204 KRTAP4-9Q9BYQ8 210 aa6.22□□□□□ -1.41
CAPN3-208ENST00000397204 VCX3AQ9NNX9 186 aa6.22□□□□□ -1.41
CAPN3-208ENST00000397204 MTFP1Q9UDX5 166 aa6.22□□□□□ -1.41
CAPN3-208ENST00000397204 DNAH5Q8TE73 4624 aa6.22□□□□□ -1.41
CAPN3-208ENST00000397204 IGHV3OR16-12A0A075B7B8 117 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 TEX13DA0A0J9YY54 714 aaPredicted RBP6.21□□□□□ -1.42
CAPN3-208ENST00000397204 HPGDSO60760 199 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 NXPH3O95157 252 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 IGKV3-20P01619 116 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 PSG1P11464 419 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 RORCP51449 518 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 PSG9Q00887 426 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 KLF9Q13886 244 aaPredicted RBP6.21□□□□□ -1.42
CAPN3-208ENST00000397204 C1orf194Q5T5A4 169 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 FAM222AQ5U5X8 452 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 OR8G2PQ6IF36 304 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 SELENOHQ8IZQ5 122 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms