RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 PRSS22Q9GZN4 317 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 TRAV34A0A0B4J273 112 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 E7EUB6 86 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 K7EP13 123 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 CA7P43166 264 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 HINT1P49773 126 aaPredicted RBP10.73□□□□□ -0.69
TRIM40-207ENST00000396581 PTTG1IPP53801 180 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 ASPHD1Q5U4P2 390 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 SPATA12Q7Z6I5 190 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 ZNF596Q8TC21 504 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 HARBI1Q96MB7 349 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 EPDR1Q9UM22 224 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 SOX21Q9Y651 276 aaPredicted RBP10.73□□□□□ -0.69
TRIM40-207ENST00000396581 LINC00312Q9Y6C7 94 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 REG1BP48304 166 aa10.72□□□□□ -0.69
TRIM40-207ENST00000396581 Q56UQ5 140 aa10.72□□□□□ -0.69
TRIM40-207ENST00000396581 LEMD1Q68G75 181 aa10.72□□□□□ -0.69
TRIM40-207ENST00000396581 STXBP6Q8NFX7 210 aa10.72□□□□□ -0.69
TRIM40-207ENST00000396581 MRPL20Q9BYC9 149 aaKnown RBP10.72□□□□□ -0.69
TRIM40-207ENST00000396581 ZNRD1Q9P1U0 126 aa10.72□□□□□ -0.69
TRIM40-207ENST00000396581 PCNX1Q96RV3 2341 aa10.72□□□□□ -0.69
TRIM40-207ENST00000396581 hADV38S2A0JD32 116 aa10.72□□□□□ -0.69
TRIM40-207ENST00000396581 APOA2P02652 100 aa10.72□□□□□ -0.69
TRIM40-207ENST00000396581 HBBP68871 147 aa10.72□□□□□ -0.69
TRIM40-207ENST00000396581 WT1-ASQ06250 92 aa10.72□□□□□ -0.69
TRIM40-207ENST00000396581 PRR30Q53SZ7 412 aaPredicted RBP10.72□□□□□ -0.69
TRIM40-207ENST00000396581 PVRIGQ6DKI7 326 aa10.72□□□□□ -0.69
TRIM40-207ENST00000396581 RNASEKQ6P5S7 137 aaKnown RBP10.72□□□□□ -0.69
TRIM40-207ENST00000396581 UNQ5815/PRO19632Q6UWF5 114 aa10.72□□□□□ -0.69
TRIM40-207ENST00000396581 FAM216BQ8N7L0 139 aa10.72□□□□□ -0.69
TRIM40-207ENST00000396581 CHCHD1Q96BP2 118 aaKnown RBP10.72□□□□□ -0.69
TRIM40-207ENST00000396581 GPR82Q96P67 336 aa10.72□□□□□ -0.69
TRIM40-207ENST00000396581 CCL13Q99616 98 aa10.72□□□□□ -0.69
TRIM40-207ENST00000396581 TMEM70Q9BUB7 260 aa10.72□□□□□ -0.69
TRIM40-207ENST00000396581 ATRXP46100 2492 aa10.71□□□□□ -0.69
TRIM40-207ENST00000396581 C19orf71A6NCJ1 209 aa10.71□□□□□ -0.69
TRIM40-207ENST00000396581 M0R1B8 84 aa10.71□□□□□ -0.69
TRIM40-207ENST00000396581 CORTO00230 105 aa10.71□□□□□ -0.69
TRIM40-207ENST00000396581 IGHV1-46P01743 117 aa10.71□□□□□ -0.69
TRIM40-207ENST00000396581 GPR6P46095 362 aaPredicted RBP10.71□□□□□ -0.69
TRIM40-207ENST00000396581 RBX1P62877 108 aa10.71□□□□□ -0.69
TRIM40-207ENST00000396581 FAM71F2Q6NXP2 309 aa10.71□□□□□ -0.69
TRIM40-207ENST00000396581 ZCCHC24Q8N2G6 241 aaKnown RBP10.71□□□□□ -0.69
TRIM40-207ENST00000396581 KIR3DL3Q8N743 410 aa10.71□□□□□ -0.69
TRIM40-207ENST00000396581 VSTM2AQ8TAG5 236 aa10.71□□□□□ -0.69
TRIM40-207ENST00000396581 NPIPB3Q92617 1050 aa10.71□□□□□ -0.69
TRIM40-207ENST00000396581 RND1Q92730 232 aa10.71□□□□□ -0.69
TRIM40-207ENST00000396581 SSBP4Q9BWG4 385 aaPredicted RBP10.71□□□□□ -0.69
TRIM40-207ENST00000396581 ST20Q9HBF5 79 aa10.71□□□□□ -0.69
TRIM40-207ENST00000396581 ZNF492Q9P255 531 aa10.71□□□□□ -0.69
TRIM40-207ENST00000396581 CADP27708 2225 aa10.71□□□□□ -0.7
TRIM40-207ENST00000396581 TPRP12270 2363 aaKnown RBP10.71□□□□□ -0.7
TRIM40-207ENST00000396581 IGHV2-70DA0A0C4DH43 119 aa10.7□□□□□ -0.7
TRIM40-207ENST00000396581 A0A0G2JNJ9 132 aa10.7□□□□□ -0.7
TRIM40-207ENST00000396581 PCP4P48539 62 aa10.7□□□□□ -0.7
TRIM40-207ENST00000396581 SUB1P53999 127 aaKnown RBP eCLIP10.7□□□□□ -0.7
TRIM40-207ENST00000396581 TNFAIP6P98066 277 aaPredicted RBP10.7□□□□□ -0.7
TRIM40-207ENST00000396581 FLYWCH2Q96CP2 140 aaKnown RBP10.7□□□□□ -0.7
TRIM40-207ENST00000396581 GFRA4Q9GZZ7 299 aa10.7□□□□□ -0.7
TRIM40-207ENST00000396581 GAL3ST2Q9H3Q3 398 aa10.7□□□□□ -0.7
TRIM40-207ENST00000396581 Q9UFV3 132 aa10.7□□□□□ -0.7
TRIM40-207ENST00000396581 RAI1Q7Z5J4 1906 aaPredicted RBP10.7□□□□□ -0.7
TRIM40-207ENST00000396581 CRYGCP07315 174 aa10.7□□□□□ -0.7
TRIM40-207ENST00000396581 MEF2CQ06413 473 aaPredicted RBP10.7□□□□□ -0.7
TRIM40-207ENST00000396581 SSX8Q7RTT4 187 aa10.7□□□□□ -0.7
TRIM40-207ENST00000396581 LINC00305Q7Z4B0 112 aa10.7□□□□□ -0.7
TRIM40-207ENST00000396581 PDPNQ86YL7 162 aa10.7□□□□□ -0.7
TRIM40-207ENST00000396581 OR4C13Q8NGP0 309 aa10.7□□□□□ -0.7
TRIM40-207ENST00000396581 RNASE8Q8TDE3 154 aaKnown RBP10.7□□□□□ -0.7
TRIM40-207ENST00000396581 RPP21Q9H633 154 aaKnown RBP10.7□□□□□ -0.7
TRIM40-207ENST00000396581 MRPL36Q9P0J6 103 aaKnown RBP10.7□□□□□ -0.7
TRIM40-207ENST00000396581 TNCP24821 2201 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 LOC105371242A0A075B767 164 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 FAM231BA6NCW3 169 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 LTAP01374 205 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 IGLV2-23P01705 113 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 CAMPP49913 170 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 GNG5P63218 68 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 RBPJQ06330 500 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 LRRC10Q5BKY1 277 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 PRR27Q6MZM9 219 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 LINC00322Q6ZN03 302 aaPredicted RBP10.69□□□□□ -0.7
TRIM40-207ENST00000396581 C8orf31Q8N9H6 132 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 PERPQ96FX8 193 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 HEATR1Q9H583 2144 aaKnown RBP10.69□□□□□ -0.7
TRIM40-207ENST00000396581 OR4C46A6NHA9 309 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 A8MWL6 223 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 NPIPB6E9PJ23 425 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 MOSP00540 346 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 TNFSF4P23510 183 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 FAM27E3Q08E93 113 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 KLRB1Q12918 225 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 DEFB108BQ8NET1 73 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 GTSF1Q8WW33 167 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 FMC1Q96HJ9 113 aa10.69□□□□□ -0.7
TRIM40-207ENST00000396581 SYS1-DBNDD2H3BUS1 97 aa10.68□□□□□ -0.7
TRIM40-207ENST00000396581 VHLLQ6RSH7 139 aa10.68□□□□□ -0.7
TRIM40-207ENST00000396581 Q6ZVH6 145 aa10.68□□□□□ -0.7
TRIM40-207ENST00000396581 TCF24Q7RTU0 167 aa10.68□□□□□ -0.7
TRIM40-207ENST00000396581 LINC00311Q8N616 119 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms