RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 S100A7P31151 101 aa12.8□□□□□ -0.36
SNX6-202ENST00000396526 CDX1P47902 265 aaPredicted RBP12.8□□□□□ -0.36
SNX6-202ENST00000396526 MEOX2P50222 304 aa12.8□□□□□ -0.36
SNX6-202ENST00000396526 UBE2G1P62253 170 aa12.8□□□□□ -0.36
SNX6-202ENST00000396526 BLNKQ8WV28 456 aa12.8□□□□□ -0.36
SNX6-202ENST00000396526 ZZEF1O43149 2961 aa12.8□□□□□ -0.36
SNX6-202ENST00000396526 ZNF98A6NK75 572 aa12.8□□□□□ -0.36
SNX6-202ENST00000396526 SLC25A5P05141 298 aaKnown RBP12.8□□□□□ -0.36
SNX6-202ENST00000396526 MGST1P10620 155 aaKnown RBP12.8□□□□□ -0.36
SNX6-202ENST00000396526 TMEM190Q8WZ59 177 aa12.8□□□□□ -0.36
SNX6-202ENST00000396526 FXYD5Q96DB9 178 aa12.8□□□□□ -0.36
SNX6-202ENST00000396526 CDC42EP3Q9UKI2 254 aa12.8□□□□□ -0.36
SNX6-202ENST00000396526 SAA4P35542 130 aa12.8□□□□□ -0.36
SNX6-202ENST00000396526 Q8N6K4 173 aa12.8□□□□□ -0.36
SNX6-202ENST00000396526 IL36BQ9NZH7 164 aa12.8□□□□□ -0.36
SNX6-202ENST00000396526 PITPNC1Q9UKF7 332 aa12.8□□□□□ -0.36
SNX6-202ENST00000396526 K7EIM0 57 aa12.79□□□□□ -0.36
SNX6-202ENST00000396526 NPFFO15130 113 aa12.79□□□□□ -0.36
SNX6-202ENST00000396526 TTC9CQ8N5M4 171 aa12.79□□□□□ -0.36
SNX6-202ENST00000396526 SPOCK3Q9BQ16 436 aa12.79□□□□□ -0.36
SNX6-202ENST00000396526 PEX7O00628 323 aa12.79□□□□□ -0.36
SNX6-202ENST00000396526 SMIM6P0DI80 62 aa12.79□□□□□ -0.36
SNX6-202ENST00000396526 HIST1H1BP16401 226 aaKnown RBP12.79□□□□□ -0.36
SNX6-202ENST00000396526 RPEL1Q2QD12 228 aa12.79□□□□□ -0.36
SNX6-202ENST00000396526 DYNAPQ8N1N2 210 aa12.79□□□□□ -0.36
SNX6-202ENST00000396526 CHRDL1Q9BU40 450 aa12.79□□□□□ -0.36
SNX6-202ENST00000396526 OSTCQ9NRP0 149 aa12.79□□□□□ -0.36
SNX6-202ENST00000396526 PGPA6NDG6 321 aa12.78□□□□□ -0.36
SNX6-202ENST00000396526 Q56UQ5 140 aa12.78□□□□□ -0.36
SNX6-202ENST00000396526 TMEM68Q96MH6 324 aa12.78□□□□□ -0.36
SNX6-202ENST00000396526 GSX1Q9H4S2 264 aaPredicted RBP12.78□□□□□ -0.36
SNX6-202ENST00000396526 GAR1Q9NY12 217 aaKnown RBP12.78□□□□□ -0.36
SNX6-202ENST00000396526 POLR3KQ9Y2Y1 108 aaPredicted RBP12.78□□□□□ -0.36
SNX6-202ENST00000396526 BAGE2Q86Y30 109 aa12.78□□□□□ -0.36
SNX6-202ENST00000396526 DMRT1Q9Y5R6 373 aa12.78□□□□□ -0.36
SNX6-202ENST00000396526 KALRNO60229 2985 aa12.78□□□□□ -0.36
SNX6-202ENST00000396526 BPIFA4PQ86YQ2 179 aa12.78□□□□□ -0.36
SNX6-202ENST00000396526 OR4F17Q8NGA8 305 aa12.78□□□□□ -0.36
SNX6-202ENST00000396526 C21orf62Q9NYP8 219 aa12.78□□□□□ -0.36
SNX6-202ENST00000396526 HLA-DRB1P01911 266 aa12.77□□□□□ -0.36
SNX6-202ENST00000396526 ZNF329Q86UD4 541 aa12.77□□□□□ -0.36
SNX6-202ENST00000396526 CMTM2Q8TAZ6 248 aa12.77□□□□□ -0.36
SNX6-202ENST00000396526 TMUB1Q9BVT8 246 aa12.77□□□□□ -0.36
SNX6-202ENST00000396526 SLC25A39Q9BZJ4 359 aaPredicted RBP12.77□□□□□ -0.36
SNX6-202ENST00000396526 SERTAD4Q9NUC0 356 aa12.77□□□□□ -0.36
SNX6-202ENST00000396526 EPDR1Q9UM22 224 aa12.77□□□□□ -0.36
SNX6-202ENST00000396526 TRAPPC1Q9Y5R8 145 aa12.77□□□□□ -0.36
SNX6-202ENST00000396526 TOMM40O96008 361 aa12.77□□□□□ -0.37
SNX6-202ENST00000396526 HIST1H1EP10412 219 aaKnown RBP12.77□□□□□ -0.37
SNX6-202ENST00000396526 C5orf17Q8NAS9 161 aa12.77□□□□□ -0.37
SNX6-202ENST00000396526 ISLRO14498 428 aa12.77□□□□□ -0.37
SNX6-202ENST00000396526 IGKV1-17P01599 117 aa12.77□□□□□ -0.37
SNX6-202ENST00000396526 YPEL3P61236 119 aaPredicted RBP12.77□□□□□ -0.37
SNX6-202ENST00000396526 C10orf105Q8TEF2 133 aa12.77□□□□□ -0.37
SNX6-202ENST00000396526 IGLV11-55A0A075B6I3 123 aa12.76□□□□□ -0.37
SNX6-202ENST00000396526 GCGP01275 180 aa12.76□□□□□ -0.37
SNX6-202ENST00000396526 TMEM14CQ9P0S9 112 aa12.76□□□□□ -0.37
SNX6-202ENST00000396526 K7EN84 100 aa12.76□□□□□ -0.37
SNX6-202ENST00000396526 KLF17Q5JT82 389 aaPredicted RBP12.76□□□□□ -0.37
SNX6-202ENST00000396526 IBA57Q5T440 356 aaKnown RBP12.76□□□□□ -0.37
SNX6-202ENST00000396526 RNF125Q96EQ8 232 aa12.76□□□□□ -0.37
SNX6-202ENST00000396526 ZNF48Q96MX3 618 aaPredicted RBP12.76□□□□□ -0.37
SNX6-202ENST00000396526 DSCR9P59020 149 aa12.75□□□□□ -0.37
SNX6-202ENST00000396526 OR5I1Q13606 314 aa12.75□□□□□ -0.37
SNX6-202ENST00000396526 COX19Q49B96 90 aa12.75□□□□□ -0.37
SNX6-202ENST00000396526 ZNF600Q6ZNG1 722 aa12.75□□□□□ -0.37
SNX6-202ENST00000396526 Q8N9W7 124 aa12.75□□□□□ -0.37
SNX6-202ENST00000396526 IGFBPL1Q8WX77 278 aa12.75□□□□□ -0.37
SNX6-202ENST00000396526 IL4P05112 153 aa12.75□□□□□ -0.37
SNX6-202ENST00000396526 PAX8Q06710 450 aa12.75□□□□□ -0.37
SNX6-202ENST00000396526 RUSC1-AS1Q66K80 236 aa12.75□□□□□ -0.37
SNX6-202ENST00000396526 UNQ5815/PRO19632Q6UWF5 114 aa12.75□□□□□ -0.37
SNX6-202ENST00000396526 MRPL27Q9P0M9 148 aaKnown RBP12.75□□□□□ -0.37
SNX6-202ENST00000396526 SLC17A3O00476 420 aa12.74□□□□□ -0.37
SNX6-202ENST00000396526 FANCD2OSQ96PS1 177 aa12.74□□□□□ -0.37
SNX6-202ENST00000396526 TXN2Q99757 166 aa12.74□□□□□ -0.37
SNX6-202ENST00000396526 RPH3ALQ9UNE2 315 aa12.74□□□□□ -0.37
SNX6-202ENST00000396526 IGHV7-81A0A0B4J1V7 117 aa12.74□□□□□ -0.37
SNX6-202ENST00000396526 ATG101Q9BSB4 218 aa12.74□□□□□ -0.37
SNX6-202ENST00000396526 OTORQ9NRC9 128 aa12.74□□□□□ -0.37
SNX6-202ENST00000396526 CENPVL3A0A0U1RRI6 287 aa12.73□□□□□ -0.37
SNX6-202ENST00000396526 PCP4L1A6NKN8 68 aa12.73□□□□□ -0.37
SNX6-202ENST00000396526 ZNF705GA8MUZ8 300 aaPredicted RBP12.73□□□□□ -0.37
SNX6-202ENST00000396526 OR2J3O76001 311 aa12.73□□□□□ -0.37
SNX6-202ENST00000396526 SNRPCP09234 159 aaKnown RBP12.73□□□□□ -0.37
SNX6-202ENST00000396526 GP9P14770 177 aa12.73□□□□□ -0.37
SNX6-202ENST00000396526 ACTL10Q5JWF8 245 aa12.73□□□□□ -0.37
SNX6-202ENST00000396526 SMIM12Q96EX1 92 aa12.73□□□□□ -0.37
SNX6-202ENST00000396526 SHANK2-AS3Q9BTD1 123 aa12.73□□□□□ -0.37
SNX6-202ENST00000396526 Q9H3A6 140 aa12.73□□□□□ -0.37
SNX6-202ENST00000396526 FBXL7Q9UJT9 491 aa12.73□□□□□ -0.37
SNX6-202ENST00000396526 K7EQM0 130 aa12.73□□□□□ -0.37
SNX6-202ENST00000396526 TMEM183BQ1AE95 376 aa12.73□□□□□ -0.37
SNX6-202ENST00000396526 LEMD1Q68G75 181 aa12.73□□□□□ -0.37
SNX6-202ENST00000396526 IGHV4-61A0A0C4DH41 118 aa12.73□□□□□ -0.37
SNX6-202ENST00000396526 XKRY2A2RUG3 117 aa12.73□□□□□ -0.37
SNX6-202ENST00000396526 GATCO43716 136 aaKnown RBP12.73□□□□□ -0.37
SNX6-202ENST00000396526 ZNF491Q8N8L2 437 aa12.73□□□□□ -0.37
SNX6-202ENST00000396526 IGHV1-69DA0A0B4J2H0 117 aa12.72□□□□□ -0.37
SNX6-202ENST00000396526 IGHV1-69P01742 117 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms