RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 FAM90A16PA6NEW6 464 aa10.15□□□□□ -0.78
SLC28A1-203ENST00000394573 FAM90A8PA6NJQ4 464 aa10.15□□□□□ -0.78
SLC28A1-203ENST00000394573 FAM90A9PA6NNJ1 464 aa10.15□□□□□ -0.78
SLC28A1-203ENST00000394573 LINC00473A8K010 186 aa10.15□□□□□ -0.78
SLC28A1-203ENST00000394573 ERVK11-1P61568 191 aa10.15□□□□□ -0.78
SLC28A1-203ENST00000394573 UBE2L3P68036 154 aaKnown RBP10.15□□□□□ -0.78
SLC28A1-203ENST00000394573 GAGE2BQ13066 116 aa10.15□□□□□ -0.78
SLC28A1-203ENST00000394573 GAGE2EQ4V326 116 aa10.15□□□□□ -0.78
SLC28A1-203ENST00000394573 GAGE2DQ9UEU5 116 aa10.15□□□□□ -0.78
SLC28A1-203ENST00000394573 INTS1Q8N201 2190 aaKnown RBP10.15□□□□□ -0.78
SLC28A1-203ENST00000394573 TET2Q6N021 2002 aaPredicted RBP10.15□□□□□ -0.78
SLC28A1-203ENST00000394573 TRIOO75962 3097 aa10.15□□□□□ -0.79
SLC28A1-203ENST00000394573 DEFB108AA8MXU0 73 aa10.14□□□□□ -0.79
SLC28A1-203ENST00000394573 PSMB2P49721 201 aa10.14□□□□□ -0.79
SLC28A1-203ENST00000394573 F5P12259 2224 aa10.14□□□□□ -0.79
SLC28A1-203ENST00000394573 IGHV3-43A0A0B4J1X8 118 aa10.14□□□□□ -0.79
SLC28A1-203ENST00000394573 IGHV3-43DP0DP04 118 aa10.14□□□□□ -0.79
SLC28A1-203ENST00000394573 RRN3P1Q2M238 152 aa10.14□□□□□ -0.79
SLC28A1-203ENST00000394573 CFAP126Q5VTH2 177 aa10.14□□□□□ -0.79
SLC28A1-203ENST00000394573 Q6ZQT7 251 aa10.14□□□□□ -0.79
SLC28A1-203ENST00000394573 GTSCR1Q86UQ5 136 aa10.14□□□□□ -0.79
SLC28A1-203ENST00000394573 H3BVH4 76 aa10.14□□□□□ -0.79
SLC28A1-203ENST00000394573 TPPP3Q9BW30 176 aa10.14□□□□□ -0.79
SLC28A1-203ENST00000394573 PROK2Q9HC23 129 aa10.14□□□□□ -0.79
SLC28A1-203ENST00000394573 PRSS46E5RG02 174 aa10.13□□□□□ -0.79
SLC28A1-203ENST00000394573 GLRXP35754 106 aa10.13□□□□□ -0.79
SLC28A1-203ENST00000394573 FAM231DQ6ZW35 169 aa10.13□□□□□ -0.79
SLC28A1-203ENST00000394573 Q71RC1 249 aaPredicted RBP10.13□□□□□ -0.79
SLC28A1-203ENST00000394573 PRRG4Q9BZD6 226 aa10.13□□□□□ -0.79
SLC28A1-203ENST00000394573 LOC107984156A0A0G2JMH3 177 aa10.13□□□□□ -0.79
SLC28A1-203ENST00000394573 RHODO00212 210 aa10.13□□□□□ -0.79
SLC28A1-203ENST00000394573 PEX7O00628 323 aa10.13□□□□□ -0.79
SLC28A1-203ENST00000394573 GFRA3O60609 400 aa10.13□□□□□ -0.79
SLC28A1-203ENST00000394573 MYOD1P15172 320 aa10.13□□□□□ -0.79
SLC28A1-203ENST00000394573 LGALS9BQ3B8N2 356 aa10.13□□□□□ -0.79
SLC28A1-203ENST00000394573 C5orf47Q569G3 176 aa10.13□□□□□ -0.79
SLC28A1-203ENST00000394573 LGALS9CQ6DKI2 356 aa10.13□□□□□ -0.79
SLC28A1-203ENST00000394573 ARL17AQ8IVW1 177 aa10.13□□□□□ -0.79
SLC28A1-203ENST00000394573 RPP21Q9H633 154 aaKnown RBP10.13□□□□□ -0.79
SLC28A1-203ENST00000394573 BRWD1Q9NSI6 2320 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 FAM90A10PA6NDY2 464 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 FAM90A20PA6NIJ5 464 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 FAM90A7PA6NKC0 464 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 FAM90A22PA8MWA6 464 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 FAM90A12PA8MX19 464 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 FAM90A5PA8MXJ8 464 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 FAM90A23PA8MXZ1 464 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 CEACAM4O75871 244 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 PLAUP00749 431 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 FAM90A15PP0C7V4 464 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 FAM90A13PP0C7W8 464 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 FAM90A14PP0C7W9 464 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 FAM90A24PP0C7X0 464 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 IFITM1P13164 125 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 RAB9BQ9NP90 201 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 FAM186AA6NE01 2351 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 IGHV3-13P01766 116 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 PI4KAP42356 2102 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 HOXA4Q00056 320 aaPredicted RBP10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 TFF2Q03403 129 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 MLANAQ16655 118 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 ZFP2Q6ZN57 461 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 OR1L8Q8NGR8 309 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 ASCL2Q99929 193 aa10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 RPP25Q9BUL9 199 aaKnown RBP10.12□□□□□ -0.79
SLC28A1-203ENST00000394573 TNCP24821 2201 aa10.11□□□□□ -0.79
SLC28A1-203ENST00000394573 P01737 135 aa10.11□□□□□ -0.79
SLC28A1-203ENST00000394573 PRR20EP86478 221 aa10.11□□□□□ -0.79
SLC28A1-203ENST00000394573 PRR20CP86479 221 aa10.11□□□□□ -0.79
SLC28A1-203ENST00000394573 PRR20DP86480 221 aa10.11□□□□□ -0.79
SLC28A1-203ENST00000394573 PRR20BP86481 221 aa10.11□□□□□ -0.79
SLC28A1-203ENST00000394573 PRR20AP86496 221 aa10.11□□□□□ -0.79
SLC28A1-203ENST00000394573 GAB4Q2WGN9 574 aa10.11□□□□□ -0.79
SLC28A1-203ENST00000394573 ADAMTS20P59510 1910 aa10.11□□□□□ -0.79
SLC28A1-203ENST00000394573 FCGR3BO75015 233 aa10.11□□□□□ -0.79
SLC28A1-203ENST00000394573 HIST1H4GQ99525 98 aa10.11□□□□□ -0.79
SLC28A1-203ENST00000394573 FSCN3Q9NQT6 498 aa10.11□□□□□ -0.79
SLC28A1-203ENST00000394573 H3BTX0 84 aa10.1□□□□□ -0.79
SLC28A1-203ENST00000394573 IGHV3-9P01782 118 aa10.1□□□□□ -0.79
SLC28A1-203ENST00000394573 MAP1LC3AQ9H492 121 aa10.1□□□□□ -0.79
SLC28A1-203ENST00000394573 C7orf69Q9H7B7 122 aa10.1□□□□□ -0.79
SLC28A1-203ENST00000394573 SLC25A10Q9UBX3 287 aaPredicted RBP10.1□□□□□ -0.79
SLC28A1-203ENST00000394573 IGKV1OR2-108A0A075B7D4 117 aa10.1□□□□□ -0.79
SLC28A1-203ENST00000394573 SNCGO76070 127 aa10.1□□□□□ -0.79
SLC28A1-203ENST00000394573 MEOX1P50221 254 aa10.1□□□□□ -0.79
SLC28A1-203ENST00000394573 C10orf128Q5T292 105 aa10.1□□□□□ -0.79
SLC28A1-203ENST00000394573 RBPMS2Q6ZRY4 209 aaKnown RBP10.1□□□□□ -0.79
SLC28A1-203ENST00000394573 MAPKAPK5-AS1Q8N8E1 139 aa10.1□□□□□ -0.79
SLC28A1-203ENST00000394573 RFESDQ8TAC1 157 aa10.1□□□□□ -0.79
SLC28A1-203ENST00000394573 PPDPFLQ8WWR9 84 aa10.1□□□□□ -0.79
SLC28A1-203ENST00000394573 IFI27L1Q96BM0 104 aa10.1□□□□□ -0.79
SLC28A1-203ENST00000394573 VCX2Q9H322 139 aa10.1□□□□□ -0.79
SLC28A1-203ENST00000394573 FBXL15Q9H469 300 aa10.1□□□□□ -0.79
SLC28A1-203ENST00000394573 REV3LO60673 3130 aa10.1□□□□□ -0.79
SLC28A1-203ENST00000394573 TFF1P04155 84 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 ZNF688P0C7X2 276 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 SRSF9Q13242 221 aaKnown RBP eCLIP10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 FAM27BQ5VT28 67 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 TUSC5Q8IXB3 177 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 CFHR5Q9BXR6 569 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 1120.1 ms