RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 SLC25A10Q9UBX3 287 aaPredicted RBP13.56□□□□□ -0.24
SIPA1-201ENST00000394224 OR2T8A6NH00 312 aa13.55□□□□□ -0.24
SIPA1-201ENST00000394224 NEUROG1Q92886 237 aa13.55□□□□□ -0.24
SIPA1-201ENST00000394224 SARAFQ96BY9 339 aa13.55□□□□□ -0.24
SIPA1-201ENST00000394224 ZNF71Q9NQZ8 489 aaPredicted RBP13.55□□□□□ -0.24
SIPA1-201ENST00000394224 Q0VG73 95 aa13.55□□□□□ -0.24
SIPA1-201ENST00000394224 PATE2Q6UY27 113 aa13.55□□□□□ -0.24
SIPA1-201ENST00000394224 GOLT1AQ6ZVE7 132 aa13.55□□□□□ -0.24
SIPA1-201ENST00000394224 SPRY4Q9C004 299 aa13.55□□□□□ -0.24
SIPA1-201ENST00000394224 DSCAML1Q8TD84 2053 aa13.55□□□□□ -0.24
SIPA1-201ENST00000394224 COL8A1P27658 744 aa13.54□□□□□ -0.24
SIPA1-201ENST00000394224 CD69Q07108 199 aa13.54□□□□□ -0.24
SIPA1-201ENST00000394224 KLF17Q5JT82 389 aaPredicted RBP13.54□□□□□ -0.24
SIPA1-201ENST00000394224 KLHDC1Q8N7A1 406 aa13.54□□□□□ -0.24
SIPA1-201ENST00000394224 OR8A1Q8NGG7 326 aa13.54□□□□□ -0.24
SIPA1-201ENST00000394224 RAB37Q96AX2 223 aa13.54□□□□□ -0.24
SIPA1-201ENST00000394224 ZNF430Q9H8G1 570 aaPredicted RBP13.54□□□□□ -0.24
SIPA1-201ENST00000394224 IZUMO1RA6ND01 250 aa13.54□□□□□ -0.24
SIPA1-201ENST00000394224 BTF3P20290 206 aaKnown RBP13.54□□□□□ -0.24
SIPA1-201ENST00000394224 C9JCJ5 164 aa13.54□□□□□ -0.24
SIPA1-201ENST00000394224 K7EM74 188 aa13.54□□□□□ -0.24
SIPA1-201ENST00000394224 P01737 135 aa13.54□□□□□ -0.24
SIPA1-201ENST00000394224 IGHV3-23P01764 117 aa13.54□□□□□ -0.24
SIPA1-201ENST00000394224 PRCDQ00LT1 54 aa13.54□□□□□ -0.24
SIPA1-201ENST00000394224 FOXE3Q13461 319 aa13.54□□□□□ -0.24
SIPA1-201ENST00000394224 IGFL4Q6B9Z1 124 aa13.54□□□□□ -0.24
SIPA1-201ENST00000394224 OR1L4Q8NGR5 311 aa13.54□□□□□ -0.24
SIPA1-201ENST00000394224 SFTPCP11686 197 aa13.53□□□□□ -0.24
SIPA1-201ENST00000394224 ASCL3Q9NQ33 180 aa13.53□□□□□ -0.24
SIPA1-201ENST00000394224 FOXA2Q9Y261 457 aaPredicted RBP13.53□□□□□ -0.24
SIPA1-201ENST00000394224 MUC6Q6W4X9 2439 aa13.53□□□□□ -0.24
SIPA1-201ENST00000394224 IGHV1-46P01743 117 aa13.53□□□□□ -0.24
SIPA1-201ENST00000394224 LDLRAD2Q5SZI1 272 aa13.53□□□□□ -0.24
SIPA1-201ENST00000394224 PRR7Q8TB68 274 aa13.53□□□□□ -0.24
SIPA1-201ENST00000394224 DDB2Q92466 427 aa13.53□□□□□ -0.24
SIPA1-201ENST00000394224 OSTCQ9NRP0 149 aa13.53□□□□□ -0.24
SIPA1-201ENST00000394224 LEPROTL1O95214 131 aa13.53□□□□□ -0.24
SIPA1-201ENST00000394224 HTR1DP28221 377 aa13.53□□□□□ -0.24
SIPA1-201ENST00000394224 FAM222BQ8WU58 562 aa13.53□□□□□ -0.24
SIPA1-201ENST00000394224 C17orf77Q96MU5 243 aa13.53□□□□□ -0.24
SIPA1-201ENST00000394224 ZNF738Q8NE65 137 aa13.52□□□□□ -0.24
SIPA1-201ENST00000394224 ALKBH7Q9BT30 221 aaPredicted RBP13.52□□□□□ -0.24
SIPA1-201ENST00000394224 HILPDAQ9Y5L2 63 aa13.52□□□□□ -0.24
SIPA1-201ENST00000394224 FBLL1A6NHQ2 334 aaKnown RBP13.52□□□□□ -0.25
SIPA1-201ENST00000394224 LY6HO94772 140 aa13.52□□□□□ -0.25
SIPA1-201ENST00000394224 OR1L8Q8NGR8 309 aa13.52□□□□□ -0.25
SIPA1-201ENST00000394224 MT-ND6P03923 174 aa13.52□□□□□ -0.25
SIPA1-201ENST00000394224 NBEAP1P0C6P0 100 aa13.52□□□□□ -0.25
SIPA1-201ENST00000394224 RPUSD1Q9UJJ7 312 aaKnown RBP13.52□□□□□ -0.25
SIPA1-201ENST00000394224 PSG1P11464 419 aa13.51□□□□□ -0.25
SIPA1-201ENST00000394224 GAFA1Q96PS6 74 aa13.51□□□□□ -0.25
SIPA1-201ENST00000394224 DKK4Q9UBT3 224 aa13.51□□□□□ -0.25
SIPA1-201ENST00000394224 PRR33A8MZF0 331 aa13.51□□□□□ -0.25
SIPA1-201ENST00000394224 K7EMI3 77 aa13.51□□□□□ -0.25
SIPA1-201ENST00000394224 AMMECR1LQ6DCA0 310 aa13.51□□□□□ -0.25
SIPA1-201ENST00000394224 ZNF329Q86UD4 541 aa13.51□□□□□ -0.25
SIPA1-201ENST00000394224 FAM167A-AS1Q96KT0 104 aa13.51□□□□□ -0.25
SIPA1-201ENST00000394224 TXNDC17Q9BRA2 123 aa13.51□□□□□ -0.25
SIPA1-201ENST00000394224 PPIAL4DF5H284 164 aa13.51□□□□□ -0.25
SIPA1-201ENST00000394224 TDGF1P13385 188 aa13.51□□□□□ -0.25
SIPA1-201ENST00000394224 SRSF12Q8WXF0 261 aaKnown RBP13.51□□□□□ -0.25
SIPA1-201ENST00000394224 SLC25A15Q9Y619 301 aa13.51□□□□□ -0.25
SIPA1-201ENST00000394224 M0R3E3 92 aa13.5□□□□□ -0.25
SIPA1-201ENST00000394224 SEM1Q6ZVN7 128 aa13.5□□□□□ -0.25
SIPA1-201ENST00000394224 ZNF257Q9Y2Q1 563 aa13.5□□□□□ -0.25
SIPA1-201ENST00000394224 HSBP1L1C9JCN9 74 aa13.5□□□□□ -0.25
SIPA1-201ENST00000394224 CTRLP40313 264 aa13.5□□□□□ -0.25
SIPA1-201ENST00000394224 C11orf52Q96A22 123 aa13.5□□□□□ -0.25
SIPA1-201ENST00000394224 TMEM70Q9BUB7 260 aa13.5□□□□□ -0.25
SIPA1-201ENST00000394224 IGHV3OR16-13A0A075B7E8 117 aa13.5□□□□□ -0.25
SIPA1-201ENST00000394224 IGHV3-74A0A0B4J1X5 117 aa13.5□□□□□ -0.25
SIPA1-201ENST00000394224 F2RL2O00254 374 aa13.5□□□□□ -0.25
SIPA1-201ENST00000394224 CNIH1O95406 144 aa13.5□□□□□ -0.25
SIPA1-201ENST00000394224 F11RQ9Y624 299 aaKnown RBP13.5□□□□□ -0.25
SIPA1-201ENST00000394224 FBLN7Q53RD9 439 aa13.49□□□□□ -0.25
SIPA1-201ENST00000394224 OR10J3Q5JRS4 329 aa13.49□□□□□ -0.25
SIPA1-201ENST00000394224 DEFB104AQ8WTQ1 72 aa13.49□□□□□ -0.25
SIPA1-201ENST00000394224 GUCD1Q96NT3 240 aa13.49□□□□□ -0.25
SIPA1-201ENST00000394224 TRAV9-2A0A087WT02 112 aa13.49□□□□□ -0.25
SIPA1-201ENST00000394224 SMIM27A0A1W2PRY6 76 aa13.49□□□□□ -0.25
SIPA1-201ENST00000394224 PRSS57Q6UWY2 283 aa13.49□□□□□ -0.25
SIPA1-201ENST00000394224 IGF2BP2-AS1Q96M15 143 aa13.49□□□□□ -0.25
SIPA1-201ENST00000394224 TMUB1Q9BVT8 246 aa13.49□□□□□ -0.25
SIPA1-201ENST00000394224 ZNF292O60281 2723 aa13.49□□□□□ -0.25
SIPA1-201ENST00000394224 CENPEQ02224 2701 aa13.49□□□□□ -0.25
SIPA1-201ENST00000394224 TRGV8A0A0C4DH27 118 aa13.49□□□□□ -0.25
SIPA1-201ENST00000394224 DLL1O00548 723 aa13.49□□□□□ -0.25
SIPA1-201ENST00000394224 TMPRSS3P57727 454 aa13.49□□□□□ -0.25
SIPA1-201ENST00000394224 GTSF1Q8WW33 167 aa13.49□□□□□ -0.25
SIPA1-201ENST00000394224 TRAV17A0A0B4J275 112 aa13.48□□□□□ -0.25
SIPA1-201ENST00000394224 A0A1W2PRE2 83 aa13.48□□□□□ -0.25
SIPA1-201ENST00000394224 FAM106CPP0CH98 169 aa13.48□□□□□ -0.25
SIPA1-201ENST00000394224 HIST1H1EP10412 219 aaKnown RBP13.48□□□□□ -0.25
SIPA1-201ENST00000394224 FAM106AQ4KMX7 169 aa13.48□□□□□ -0.25
SIPA1-201ENST00000394224 C18orf15Q96N68 181 aa13.48□□□□□ -0.25
SIPA1-201ENST00000394224 FBXL15Q9H469 300 aa13.48□□□□□ -0.25
SIPA1-201ENST00000394224 A0A1W2PPI3 338 aa13.48□□□□□ -0.25
SIPA1-201ENST00000394224 TNFSF4P23510 183 aa13.48□□□□□ -0.25
SIPA1-201ENST00000394224 BPIFB3P59826 476 aa13.48□□□□□ -0.25
SIPA1-201ENST00000394224 TMEM200BQ69YZ2 307 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms