RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 ZNF71Q9NQZ8 489 aaPredicted RBP13.07□□□□□ -0.32
PDZD4-202ENST00000393758 TMPRSS3P57727 454 aa13.07□□□□□ -0.32
PDZD4-202ENST00000393758 TNRC6AQ8NDV7 1962 aaKnown RBP13.07□□□□□ -0.32
PDZD4-202ENST00000393758 FXYD7P58549 80 aa13.07□□□□□ -0.32
PDZD4-202ENST00000393758 DIAPH2-AS1Q14236 149 aa13.07□□□□□ -0.32
PDZD4-202ENST00000393758 WFDC3Q8IUB2 231 aa13.07□□□□□ -0.32
PDZD4-202ENST00000393758 CIARTQ8N365 385 aaPredicted RBP13.07□□□□□ -0.32
PDZD4-202ENST00000393758 RPUSD1Q9UJJ7 312 aaKnown RBP13.07□□□□□ -0.32
PDZD4-202ENST00000393758 TECTAO75443 2155 aa13.07□□□□□ -0.32
PDZD4-202ENST00000393758 RPL27AP46776 148 aaKnown RBP13.06□□□□□ -0.32
PDZD4-202ENST00000393758 GAGE1Q13065 139 aa13.06□□□□□ -0.32
PDZD4-202ENST00000393758 C2orf83Q53S99 150 aa13.06□□□□□ -0.32
PDZD4-202ENST00000393758 RNASE8Q8TDE3 154 aaKnown RBP13.06□□□□□ -0.32
PDZD4-202ENST00000393758 ZNF503Q96F45 646 aa13.06□□□□□ -0.32
PDZD4-202ENST00000393758 COLQQ9Y215 455 aaPredicted RBP13.06□□□□□ -0.32
PDZD4-202ENST00000393758 A0A087X0K7 114 aa13.06□□□□□ -0.32
PDZD4-202ENST00000393758 K7EQM0 130 aa13.06□□□□□ -0.32
PDZD4-202ENST00000393758 LINC00173Q6ZV60 143 aa13.06□□□□□ -0.32
PDZD4-202ENST00000393758 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.06□□□□□ -0.32
PDZD4-202ENST00000393758 TMEM116Q8NCL8 245 aa13.06□□□□□ -0.32
PDZD4-202ENST00000393758 OSR1Q8TAX0 266 aaPredicted RBP13.06□□□□□ -0.32
PDZD4-202ENST00000393758 SLC25A2Q9BXI2 301 aa13.06□□□□□ -0.32
PDZD4-202ENST00000393758 MBNL2Q5VZF2 373 aaKnown RBP13.06□□□□□ -0.32
PDZD4-202ENST00000393758 BPIFA4PQ86YQ2 179 aa13.06□□□□□ -0.32
PDZD4-202ENST00000393758 IGHV1-46P01743 117 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 UBE2V1Q13404 147 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 EXOC3-AS1Q8N2X6 119 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 STXBP6Q8NFX7 210 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 Q9H3A6 140 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 COX11Q9Y6N1 276 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 SMIM27A0A1W2PRY6 76 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 CD59P13987 128 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 TMEM108Q6UXF1 575 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 ZNF329Q86UD4 541 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 CACNG8Q8WXS5 425 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 PPIAL4EA0A075B759 164 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 TCRBV4S1A1TA0A5B7 111 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 PPIAL4DF5H284 164 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 PPIAL4FP0DN26 164 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 AMMECR1LQ6DCA0 310 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 C1orf159Q96HA4 380 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 RASL11BQ9BPW5 248 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 HIGD1AQ9Y241 93 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 INSIG2Q9Y5U4 225 aa13.05□□□□□ -0.32
PDZD4-202ENST00000393758 PRSS46E5RG02 174 aa13.04□□□□□ -0.32
PDZD4-202ENST00000393758 C1orf162Q8NEQ5 155 aaPredicted RBP13.04□□□□□ -0.32
PDZD4-202ENST00000393758 ZNF257Q9Y2Q1 563 aa13.04□□□□□ -0.32
PDZD4-202ENST00000393758 SLC25A15Q9Y619 301 aa13.04□□□□□ -0.32
PDZD4-202ENST00000393758 APOHP02749 345 aaPredicted RBP13.04□□□□□ -0.32
PDZD4-202ENST00000393758 ARF6P62330 175 aa13.04□□□□□ -0.32
PDZD4-202ENST00000393758 TM4SF20Q53R12 229 aa13.04□□□□□ -0.32
PDZD4-202ENST00000393758 OR4F17Q8NGA8 305 aa13.04□□□□□ -0.32
PDZD4-202ENST00000393758 FNDC4Q9H6D8 234 aaPredicted RBP13.04□□□□□ -0.32
PDZD4-202ENST00000393758 HSPB8Q9UJY1 196 aa13.04□□□□□ -0.32
PDZD4-202ENST00000393758 E7EUB6 86 aa13.03□□□□□ -0.32
PDZD4-202ENST00000393758 NMUP48645 174 aa13.03□□□□□ -0.32
PDZD4-202ENST00000393758 FBLL1A6NHQ2 334 aaKnown RBP13.03□□□□□ -0.32
PDZD4-202ENST00000393758 HLA-DRB1P01911 266 aa13.03□□□□□ -0.32
PDZD4-202ENST00000393758 CSN1S1P47710 185 aa13.03□□□□□ -0.32
PDZD4-202ENST00000393758 COMPP49747 757 aaPredicted RBP13.03□□□□□ -0.32
PDZD4-202ENST00000393758 WT1-ASQ06250 92 aa13.03□□□□□ -0.32
PDZD4-202ENST00000393758 GAFA1Q96PS6 74 aa13.03□□□□□ -0.32
PDZD4-202ENST00000393758 TPSG1Q9NRR2 321 aa13.03□□□□□ -0.32
PDZD4-202ENST00000393758 AP5S1Q9NUS5 200 aa13.03□□□□□ -0.32
PDZD4-202ENST00000393758 TET2Q6N021 2002 aaPredicted RBP13.03□□□□□ -0.32
PDZD4-202ENST00000393758 IGHV3-35A0A0C4DH35 117 aa13.03□□□□□ -0.32
PDZD4-202ENST00000393758 RPEQ96AT9 228 aa13.03□□□□□ -0.32
PDZD4-202ENST00000393758 ZC2HC1AQ96GY0 325 aa13.03□□□□□ -0.32
PDZD4-202ENST00000393758 RELQ04864 619 aaPredicted RBP13.02□□□□□ -0.32
PDZD4-202ENST00000393758 TIMM23BQ5SRD1 257 aa13.02□□□□□ -0.32
PDZD4-202ENST00000393758 C12orf54Q6X4T0 127 aa13.02□□□□□ -0.32
PDZD4-202ENST00000393758 C5orf17Q8NAS9 161 aa13.02□□□□□ -0.32
PDZD4-202ENST00000393758 F11RQ9Y624 299 aaKnown RBP13.02□□□□□ -0.32
PDZD4-202ENST00000393758 BDP1A6H8Y1 2624 aa13.02□□□□□ -0.32
PDZD4-202ENST00000393758 IGHV3OR16-8A0A075B7F1 116 aa13.02□□□□□ -0.33
PDZD4-202ENST00000393758 OR2T8A6NH00 312 aa13.02□□□□□ -0.33
PDZD4-202ENST00000393758 CEACAM8P31997 349 aaPredicted RBP13.02□□□□□ -0.33
PDZD4-202ENST00000393758 ORAOV1Q8WV07 137 aa13.02□□□□□ -0.33
PDZD4-202ENST00000393758 DDB2Q92466 427 aa13.02□□□□□ -0.33
PDZD4-202ENST00000393758 TMUB1Q9BVT8 246 aa13.02□□□□□ -0.33
PDZD4-202ENST00000393758 PLSCR4Q9NRQ2 329 aa13.02□□□□□ -0.33
PDZD4-202ENST00000393758 MRPL27Q9P0M9 148 aaKnown RBP13.02□□□□□ -0.33
PDZD4-202ENST00000393758 HILPDAQ9Y5L2 63 aa13.02□□□□□ -0.33
PDZD4-202ENST00000393758 PSG1P11464 419 aa13.02□□□□□ -0.33
PDZD4-202ENST00000393758 RBPMS2Q6ZRY4 209 aaKnown RBP13.02□□□□□ -0.33
PDZD4-202ENST00000393758 MRPL52Q86TS9 123 aaKnown RBP13.02□□□□□ -0.33
PDZD4-202ENST00000393758 PPP1R14DQ9NXH3 145 aa13.02□□□□□ -0.33
PDZD4-202ENST00000393758 ADAMTS20P59510 1910 aa13.02□□□□□ -0.33
PDZD4-202ENST00000393758 LIPFP07098 398 aa13.01□□□□□ -0.33
PDZD4-202ENST00000393758 ESDP10768 282 aa13.01□□□□□ -0.33
PDZD4-202ENST00000393758 FBXL15Q9H469 300 aa13.01□□□□□ -0.33
PDZD4-202ENST00000393758 SYS1-DBNDD2H3BUS1 97 aa13.01□□□□□ -0.33
PDZD4-202ENST00000393758 FCER1GP30273 86 aa13.01□□□□□ -0.33
PDZD4-202ENST00000393758 RIGQ13278 110 aa13.01□□□□□ -0.33
PDZD4-202ENST00000393758 ZNF474Q6S9Z5 364 aaPredicted RBP13.01□□□□□ -0.33
PDZD4-202ENST00000393758 SLC25A48Q6ZT89 311 aaKnown RBP13.01□□□□□ -0.33
PDZD4-202ENST00000393758 H0YJW9 148 aa13.01□□□□□ -0.33
PDZD4-202ENST00000393758 GDF5OSQ5U4N7 250 aa13.01□□□□□ -0.33
PDZD4-202ENST00000393758 GAGE10A6NGK3 116 aa13□□□□□ -0.33
PDZD4-202ENST00000393758 NDUFB8O95169 186 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms