RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 IGHV3-66A0A0C4DH42 116 aa14.25□□□□□ -0.13
PDLIM7-204ENST00000393546 SMCO3A2RU48 225 aa14.25□□□□□ -0.13
PDLIM7-204ENST00000393546 CCNKO75909 580 aa14.25□□□□□ -0.13
PDLIM7-204ENST00000393546 RLN2P04090 185 aa14.25□□□□□ -0.13
PDLIM7-204ENST00000393546 HNRNPCP07910 306 aaKnown RBP eCLIP14.25□□□□□ -0.13
PDLIM7-204ENST00000393546 IGHV4-30-4P0DP06 118 aa14.25□□□□□ -0.13
PDLIM7-204ENST00000393546 CAV2P51636 162 aa14.25□□□□□ -0.13
PDLIM7-204ENST00000393546 DLK1P80370 383 aa14.25□□□□□ -0.13
PDLIM7-204ENST00000393546 ZNF90Q03938 601 aa14.25□□□□□ -0.13
PDLIM7-204ENST00000393546 TMEM144Q7Z5S9 345 aa14.25□□□□□ -0.13
PDLIM7-204ENST00000393546 TUBA4BQ9H853 241 aa14.25□□□□□ -0.13
PDLIM7-204ENST00000393546 RRAS2P62070 204 aaPredicted RBP14.24□□□□□ -0.13
PDLIM7-204ENST00000393546 PAFAH1B2P68402 229 aa14.24□□□□□ -0.13
PDLIM7-204ENST00000393546 FAM90A2PQ658T7 463 aa14.24□□□□□ -0.13
PDLIM7-204ENST00000393546 TCF24Q7RTU0 167 aa14.24□□□□□ -0.13
PDLIM7-204ENST00000393546 LILRB2Q8N423 598 aa14.24□□□□□ -0.13
PDLIM7-204ENST00000393546 GRAMD2BQ96HH9 432 aa14.24□□□□□ -0.13
PDLIM7-204ENST00000393546 C11orf1Q9H5F2 150 aa14.24□□□□□ -0.13
PDLIM7-204ENST00000393546 NPVFQ9HCQ7 196 aa14.24□□□□□ -0.13
PDLIM7-204ENST00000393546 MGAT4CQ9UBM8 478 aa14.24□□□□□ -0.13
PDLIM7-204ENST00000393546 RABAC1Q9UI14 185 aa14.24□□□□□ -0.13
PDLIM7-204ENST00000393546 IGKV1OR2-108A0A075B7D4 117 aa14.23□□□□□ -0.13
PDLIM7-204ENST00000393546 OR4C46A6NHA9 309 aa14.23□□□□□ -0.13
PDLIM7-204ENST00000393546 A8MZ25 164 aa14.23□□□□□ -0.13
PDLIM7-204ENST00000393546 OR11H12B2RN74 326 aa14.23□□□□□ -0.13
PDLIM7-204ENST00000393546 FNDC10F2Z333 226 aa14.23□□□□□ -0.13
PDLIM7-204ENST00000393546 DFFBO76075 338 aa14.23□□□□□ -0.13
PDLIM7-204ENST00000393546 CFDP00746 253 aaPredicted RBP14.23□□□□□ -0.13
PDLIM7-204ENST00000393546 FRMD6-AS1P0C7T7 363 aa14.23□□□□□ -0.13
PDLIM7-204ENST00000393546 OR2F1Q13607 317 aa14.23□□□□□ -0.13
PDLIM7-204ENST00000393546 USF2Q15853 346 aaPredicted RBP14.23□□□□□ -0.13
PDLIM7-204ENST00000393546 RNF125Q96EQ8 232 aa14.23□□□□□ -0.13
PDLIM7-204ENST00000393546 PBDC1Q9BVG4 233 aa14.23□□□□□ -0.13
PDLIM7-204ENST00000393546 GGACTQ9BVM4 153 aa14.23□□□□□ -0.13
PDLIM7-204ENST00000393546 C19orf73Q9NVV2 129 aa14.23□□□□□ -0.13
PDLIM7-204ENST00000393546 PFDN2Q9UHV9 154 aa14.23□□□□□ -0.13
PDLIM7-204ENST00000393546 ALG5Q9Y673 324 aa14.23□□□□□ -0.13
PDLIM7-204ENST00000393546 U3KQE9 123 aa14.23□□□□□ -0.13
PDLIM7-204ENST00000393546 IGKV3-7A0A075B6H7 116 aa14.22□□□□□ -0.13
PDLIM7-204ENST00000393546 FAM24AA6NFZ4 105 aa14.22□□□□□ -0.13
PDLIM7-204ENST00000393546 DEDDO75618 318 aa14.22□□□□□ -0.13
PDLIM7-204ENST00000393546 RPL11P62913 178 aaKnown RBP14.22□□□□□ -0.13
PDLIM7-204ENST00000393546 RGS21Q2M5E4 152 aa14.22□□□□□ -0.13
PDLIM7-204ENST00000393546 NHLRC4P0CG21 123 aaPredicted RBP14.21□□□□□ -0.13
PDLIM7-204ENST00000393546 P2RY1P47900 373 aa14.21□□□□□ -0.13
PDLIM7-204ENST00000393546 EIF2B2P49770 351 aaKnown RBP14.21□□□□□ -0.13
PDLIM7-204ENST00000393546 H2BFSP57053 126 aa14.21□□□□□ -0.13
PDLIM7-204ENST00000393546 LYZP61626 148 aa14.21□□□□□ -0.13
PDLIM7-204ENST00000393546 ARL16Q0P5N6 197 aa14.21□□□□□ -0.13
PDLIM7-204ENST00000393546 DEFB125Q8N687 156 aa14.21□□□□□ -0.13
PDLIM7-204ENST00000393546 BPIFCQ8NFQ6 507 aa14.21□□□□□ -0.13
PDLIM7-204ENST00000393546 ASCL2Q99929 193 aa14.21□□□□□ -0.13
PDLIM7-204ENST00000393546 LYRM2Q9NU23 88 aaPredicted RBP14.21□□□□□ -0.13
PDLIM7-204ENST00000393546 DNASE2O00115 360 aaPredicted RBP14.2□□□□□ -0.14
PDLIM7-204ENST00000393546 CST7O76096 145 aa14.2□□□□□ -0.14
PDLIM7-204ENST00000393546 NUP62P37198 522 aaPredicted RBP14.2□□□□□ -0.14
PDLIM7-204ENST00000393546 TFPI2P48307 235 aa14.2□□□□□ -0.14
PDLIM7-204ENST00000393546 CMC4P56277 68 aaPredicted RBP14.2□□□□□ -0.14
PDLIM7-204ENST00000393546 SLC38A11Q08AI6 406 aa14.2□□□□□ -0.14
PDLIM7-204ENST00000393546 LRRC37A5PQ49AS3 106 aa14.2□□□□□ -0.14
PDLIM7-204ENST00000393546 GBGT1Q8N5D6 347 aa14.2□□□□□ -0.14
PDLIM7-204ENST00000393546 HELTA6NFD8 242 aa14.19□□□□□ -0.14
PDLIM7-204ENST00000393546 E5RGE8 158 aa14.19□□□□□ -0.14
PDLIM7-204ENST00000393546 SULT1A1P50225 295 aa14.19□□□□□ -0.14
PDLIM7-204ENST00000393546 TEPPQ6URK8 271 aa14.19□□□□□ -0.14
PDLIM7-204ENST00000393546 C16orf54Q6UWD8 224 aa14.19□□□□□ -0.14
PDLIM7-204ENST00000393546 CYP2G1PQ6ZSU1 146 aa14.19□□□□□ -0.14
PDLIM7-204ENST00000393546 STX12Q86Y82 276 aa14.19□□□□□ -0.14
PDLIM7-204ENST00000393546 WFDC3Q8IUB2 231 aa14.19□□□□□ -0.14
PDLIM7-204ENST00000393546 TMEM252Q8N6L7 170 aa14.19□□□□□ -0.14
PDLIM7-204ENST00000393546 BUB3O43684 328 aa14.18□□□□□ -0.14
PDLIM7-204ENST00000393546 GATA2P23769 480 aaPredicted RBP14.18□□□□□ -0.14
PDLIM7-204ENST00000393546 S100A11P31949 105 aa14.18□□□□□ -0.14
PDLIM7-204ENST00000393546 AP2S1P53680 142 aaPredicted RBP14.18□□□□□ -0.14
PDLIM7-204ENST00000393546 SELENOTP62341 195 aa14.18□□□□□ -0.14
PDLIM7-204ENST00000393546 HBG1P69891 147 aa14.18□□□□□ -0.14
PDLIM7-204ENST00000393546 HBG2P69892 147 aa14.18□□□□□ -0.14
PDLIM7-204ENST00000393546 SBSPONQ8IVN8 264 aa14.18□□□□□ -0.14
PDLIM7-204ENST00000393546 TMEM217Q8N7C4 229 aa14.18□□□□□ -0.14
PDLIM7-204ENST00000393546 PPP1R1CQ8WVI7 109 aa14.18□□□□□ -0.14
PDLIM7-204ENST00000393546 PPP1R14BQ96C90 147 aa14.18□□□□□ -0.14
PDLIM7-204ENST00000393546 WFDC10AQ9H1F0 79 aa14.18□□□□□ -0.14
PDLIM7-204ENST00000393546 MED28Q9H204 178 aa14.18□□□□□ -0.14
PDLIM7-204ENST00000393546 MS4A6AQ9H2W1 248 aa14.18□□□□□ -0.14
PDLIM7-204ENST00000393546 SRD5A3Q9H8P0 318 aa14.18□□□□□ -0.14
PDLIM7-204ENST00000393546 DNAH9Q9NYC9 4486 aa14.18□□□□□ -0.14
PDLIM7-204ENST00000393546 TRAV2A0A0B4J234 112 aa14.17□□□□□ -0.14
PDLIM7-204ENST00000393546 IGSF23A1L1A6 192 aa14.17□□□□□ -0.14
PDLIM7-204ENST00000393546 TMEM182Q6ZP80 229 aaPredicted RBP14.17□□□□□ -0.14
PDLIM7-204ENST00000393546 GLMPQ8WWB7 406 aa14.17□□□□□ -0.14
PDLIM7-204ENST00000393546 FAM110AQ9BQ89 295 aa14.17□□□□□ -0.14
PDLIM7-204ENST00000393546 SLC25A31Q9H0C2 315 aa14.17□□□□□ -0.14
PDLIM7-204ENST00000393546 OR5AC2Q9NZP5 309 aa14.17□□□□□ -0.14
PDLIM7-204ENST00000393546 UBQLN2Q9UHD9 624 aa14.17□□□□□ -0.14
PDLIM7-204ENST00000393546 H0YIZ8 118 aa14.16□□□□□ -0.14
PDLIM7-204ENST00000393546 PET100P0DJ07 73 aa14.16□□□□□ -0.14
PDLIM7-204ENST00000393546 ORM2P19652 201 aa14.16□□□□□ -0.14
PDLIM7-204ENST00000393546 S100A7P31151 101 aa14.16□□□□□ -0.14
PDLIM7-204ENST00000393546 ATP6V1FQ16864 119 aa14.16□□□□□ -0.14
PDLIM7-204ENST00000393546 STXBP6Q8NFX7 210 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms