RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 LRBAP50851 2863 aa12.17□□□□□ -0.46
SHTN1-204ENST00000392903 TPRP12270 2363 aaKnown RBP12.17□□□□□ -0.46
SHTN1-204ENST00000392903 ZZEF1O43149 2961 aa12.17□□□□□ -0.46
SHTN1-204ENST00000392903 TMEM238C9JI98 176 aa12.17□□□□□ -0.46
SHTN1-204ENST00000392903 SYS1-DBNDD2H3BUS1 97 aa12.17□□□□□ -0.46
SHTN1-204ENST00000392903 SAA2P0DJI9 122 aaPredicted RBP12.17□□□□□ -0.46
SHTN1-204ENST00000392903 BSPH1Q075Z2 132 aa12.17□□□□□ -0.46
SHTN1-204ENST00000392903 ATP5L2Q7Z4Y8 100 aa12.17□□□□□ -0.46
SHTN1-204ENST00000392903 OR2T6Q8NHC8 308 aa12.17□□□□□ -0.46
SHTN1-204ENST00000392903 ZNRD1Q9P1U0 126 aa12.17□□□□□ -0.46
SHTN1-204ENST00000392903 TACC2O95359 2948 aa12.17□□□□□ -0.46
SHTN1-204ENST00000392903 ARFGEF3Q5TH69 2177 aa12.16□□□□□ -0.46
SHTN1-204ENST00000392903 GPR6P46095 362 aaPredicted RBP12.16□□□□□ -0.46
SHTN1-204ENST00000392903 NHLRC2Q8NBF2 726 aa12.16□□□□□ -0.46
SHTN1-204ENST00000392903 CHTOPQ9Y3Y2 248 aaKnown RBP12.16□□□□□ -0.46
SHTN1-204ENST00000392903 hDV102S1A0JD36 115 aa12.16□□□□□ -0.46
SHTN1-204ENST00000392903 SCRT2Q9NQ03 307 aa12.16□□□□□ -0.46
SHTN1-204ENST00000392903 FOXA2Q9Y261 457 aaPredicted RBP12.16□□□□□ -0.46
SHTN1-204ENST00000392903 A0A1B0GXF2 115 aa12.15□□□□□ -0.46
SHTN1-204ENST00000392903 THBDP07204 575 aa12.15□□□□□ -0.46
SHTN1-204ENST00000392903 KIR2DS2P43631 304 aa12.15□□□□□ -0.46
SHTN1-204ENST00000392903 HSPE1P61604 102 aaKnown RBP12.15□□□□□ -0.46
SHTN1-204ENST00000392903 ADIPOQQ15848 244 aa12.15□□□□□ -0.46
SHTN1-204ENST00000392903 CHRDL1Q9BU40 450 aa12.15□□□□□ -0.46
SHTN1-204ENST00000392903 SSBP4Q9BWG4 385 aaPredicted RBP12.15□□□□□ -0.46
SHTN1-204ENST00000392903 SCNM1Q9BWG6 230 aa12.15□□□□□ -0.46
SHTN1-204ENST00000392903 TMEM14BQ9NUH8 114 aa12.15□□□□□ -0.46
SHTN1-204ENST00000392903 PEF1Q9UBV8 284 aaKnown RBP12.15□□□□□ -0.46
SHTN1-204ENST00000392903 GATA2P23769 480 aaPredicted RBP12.15□□□□□ -0.47
SHTN1-204ENST00000392903 S100A7P31151 101 aa12.15□□□□□ -0.47
SHTN1-204ENST00000392903 ZNF788Q6ZQV5 615 aa12.15□□□□□ -0.47
SHTN1-204ENST00000392903 CHCHD1Q96BP2 118 aaKnown RBP12.15□□□□□ -0.47
SHTN1-204ENST00000392903 TMEM191AQ9H0A3 160 aa12.15□□□□□ -0.47
SHTN1-204ENST00000392903 TRAV8-6A0A0B4J262 113 aa12.14□□□□□ -0.47
SHTN1-204ENST00000392903 HSBP1L1C9JCN9 74 aa12.14□□□□□ -0.47
SHTN1-204ENST00000392903 CORTO00230 105 aa12.14□□□□□ -0.47
SHTN1-204ENST00000392903 C8orf88P0DMB2 117 aa12.14□□□□□ -0.47
SHTN1-204ENST00000392903 HIST1H1AQ02539 215 aaPredicted RBP12.14□□□□□ -0.47
SHTN1-204ENST00000392903 NUP37Q8NFH4 326 aa12.14□□□□□ -0.47
SHTN1-204ENST00000392903 DDB2Q92466 427 aa12.14□□□□□ -0.47
SHTN1-204ENST00000392903 SLC25A33Q9BSK2 321 aa12.14□□□□□ -0.47
SHTN1-204ENST00000392903 ENY2Q9NPA8 101 aa12.14□□□□□ -0.47
SHTN1-204ENST00000392903 ZNF835Q9Y2P0 537 aa12.14□□□□□ -0.47
SHTN1-204ENST00000392903 IGKV1OR2-108A0A075B7D4 117 aa12.13□□□□□ -0.47
SHTN1-204ENST00000392903 IGHV1-24A0A0C4DH33 117 aa12.13□□□□□ -0.47
SHTN1-204ENST00000392903 HIGD1CA8MV81 97 aa12.13□□□□□ -0.47
SHTN1-204ENST00000392903 IGLC1P0CG04 106 aa12.13□□□□□ -0.47
SHTN1-204ENST00000392903 SH2D7A6NKC9 451 aaPredicted RBP12.13□□□□□ -0.47
SHTN1-204ENST00000392903 FAM87AP0C7U9 286 aa12.13□□□□□ -0.47
SHTN1-204ENST00000392903 MYOD1P15172 320 aa12.13□□□□□ -0.47
SHTN1-204ENST00000392903 CAMPP49913 170 aa12.13□□□□□ -0.47
SHTN1-204ENST00000392903 ASPHD1Q5U4P2 390 aa12.13□□□□□ -0.47
SHTN1-204ENST00000392903 PET117Q6UWS5 81 aa12.13□□□□□ -0.47
SHTN1-204ENST00000392903 CCL17Q92583 94 aa12.13□□□□□ -0.47
SHTN1-204ENST00000392903 LINC00479Q96M42 142 aa12.13□□□□□ -0.47
SHTN1-204ENST00000392903 MEGF9Q9H1U4 602 aa12.13□□□□□ -0.47
SHTN1-204ENST00000392903 MS4A6AQ9H2W1 248 aa12.13□□□□□ -0.47
SHTN1-204ENST00000392903 SPTBN4Q9H254 2564 aa12.13□□□□□ -0.47
SHTN1-204ENST00000392903 ATRXP46100 2492 aa12.13□□□□□ -0.47
SHTN1-204ENST00000392903 C17orf100A8MU93 164 aa12.12□□□□□ -0.47
SHTN1-204ENST00000392903 LEPROTL1O95214 131 aa12.12□□□□□ -0.47
SHTN1-204ENST00000392903 TMEM11P17152 192 aa12.12□□□□□ -0.47
SHTN1-204ENST00000392903 OR4S2Q8NH73 311 aa12.12□□□□□ -0.47
SHTN1-204ENST00000392903 IDI2-AS1Q9NZ38 188 aa12.12□□□□□ -0.47
SHTN1-204ENST00000392903 CIDEAO60543 219 aa12.12□□□□□ -0.47
SHTN1-204ENST00000392903 HIST1H1EP10412 219 aaKnown RBP12.12□□□□□ -0.47
SHTN1-204ENST00000392903 LINC00173Q6ZV60 143 aa12.12□□□□□ -0.47
SHTN1-204ENST00000392903 HINT2Q9BX68 163 aa12.12□□□□□ -0.47
SHTN1-204ENST00000392903 MRPL32Q9BYC8 188 aaKnown RBP12.12□□□□□ -0.47
SHTN1-204ENST00000392903 AMMECR1Q9Y4X0 333 aaPredicted RBP12.12□□□□□ -0.47
SHTN1-204ENST00000392903 VWC2LB2RUY7 222 aa12.11□□□□□ -0.47
SHTN1-204ENST00000392903 TNFRSF1AP19438 455 aa12.11□□□□□ -0.47
SHTN1-204ENST00000392903 FAM167A-AS1Q96KT0 104 aa12.11□□□□□ -0.47
SHTN1-204ENST00000392903 IGKV1-16P04430 117 aa12.11□□□□□ -0.47
SHTN1-204ENST00000392903 OR5AL1P0C617 328 aa12.11□□□□□ -0.47
SHTN1-204ENST00000392903 NBEAP1P0C6P0 100 aa12.11□□□□□ -0.47
SHTN1-204ENST00000392903 ARF6P62330 175 aa12.11□□□□□ -0.47
SHTN1-204ENST00000392903 SSX8Q7RTT4 187 aa12.11□□□□□ -0.47
SHTN1-204ENST00000392903 RND1Q92730 232 aa12.11□□□□□ -0.47
SHTN1-204ENST00000392903 ABCA4P78363 2273 aa12.11□□□□□ -0.47
SHTN1-204ENST00000392903 CCL3L1P16619 93 aa12.1□□□□□ -0.47
SHTN1-204ENST00000392903 UBE2L3P68036 154 aaKnown RBP12.1□□□□□ -0.47
SHTN1-204ENST00000392903 HBBP68871 147 aa12.1□□□□□ -0.47
SHTN1-204ENST00000392903 C7orf69Q9H7B7 122 aa12.1□□□□□ -0.47
SHTN1-204ENST00000392903 DCHS2Q6V1P9 2916 aa12.1□□□□□ -0.47
SHTN1-204ENST00000392903 A0A087X0K7 114 aa12.1□□□□□ -0.47
SHTN1-204ENST00000392903 GPR183P32249 361 aa12.1□□□□□ -0.47
SHTN1-204ENST00000392903 TEX36Q5VZQ5 186 aa12.1□□□□□ -0.47
SHTN1-204ENST00000392903 TCF24Q7RTU0 167 aa12.1□□□□□ -0.47
SHTN1-204ENST00000392903 MOB3BQ86TA1 216 aa12.1□□□□□ -0.47
SHTN1-204ENST00000392903 SLC25A2Q9BXI2 301 aa12.1□□□□□ -0.47
SHTN1-204ENST00000392903 RAB9BQ9NP90 201 aa12.1□□□□□ -0.47
SHTN1-204ENST00000392903 C7orf71A4D174 169 aa12.09□□□□□ -0.47
SHTN1-204ENST00000392903 PEX7O00628 323 aa12.09□□□□□ -0.47
SHTN1-204ENST00000392903 SAP30O75446 220 aa12.09□□□□□ -0.47
SHTN1-204ENST00000392903 FCN3O75636 299 aa12.09□□□□□ -0.47
SHTN1-204ENST00000392903 LIPFP07098 398 aa12.09□□□□□ -0.47
SHTN1-204ENST00000392903 UFSP1Q6NVU6 142 aa12.09□□□□□ -0.47
SHTN1-204ENST00000392903 MAP1LC3CQ9BXW4 147 aa12.09□□□□□ -0.47
SHTN1-204ENST00000392903 LOC102724200A0A096LPH7 203 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms