RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 COL8A2P25067 703 aa15.43■□□□□ 0.06
CCDC50-202ENST00000392456 EDDM3BP56851 147 aa15.43■□□□□ 0.06
CCDC50-202ENST00000392456 ZNF841Q6ZN19 808 aa15.43■□□□□ 0.06
CCDC50-202ENST00000392456 MOB1BQ7L9L4 216 aa15.43■□□□□ 0.06
CCDC50-202ENST00000392456 A0A087X0K7 114 aa15.42■□□□□ 0.06
CCDC50-202ENST00000392456 H3BUT2 72 aa15.42■□□□□ 0.06
CCDC50-202ENST00000392456 PF4V1P10720 104 aa15.42■□□□□ 0.06
CCDC50-202ENST00000392456 SLC25A6P12236 298 aa15.42■□□□□ 0.06
CCDC50-202ENST00000392456 IGFBP2P18065 325 aa15.42■□□□□ 0.06
CCDC50-202ENST00000392456 UBE2G1P62253 170 aa15.42■□□□□ 0.06
CCDC50-202ENST00000392456 BOD1L2Q8IYS8 172 aa15.42■□□□□ 0.06
CCDC50-202ENST00000392456 SVEP1Q4LDE5 3571 aa15.42■□□□□ 0.06
CCDC50-202ENST00000392456 FAM181BA6NEQ2 426 aa15.42■□□□□ 0.06
CCDC50-202ENST00000392456 LRRC30A6NM36 301 aa15.42■□□□□ 0.06
CCDC50-202ENST00000392456 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.42■□□□□ 0.06
CCDC50-202ENST00000392456 MGST3O14880 152 aa15.42■□□□□ 0.06
CCDC50-202ENST00000392456 CRYBB3P26998 211 aa15.42■□□□□ 0.06
CCDC50-202ENST00000392456 SPXQ9BT56 116 aa15.42■□□□□ 0.06
CCDC50-202ENST00000392456 IGHV3-43A0A0B4J1X8 118 aa15.41■□□□□ 0.06
CCDC50-202ENST00000392456 PAGE4O60829 102 aa15.41■□□□□ 0.06
CCDC50-202ENST00000392456 CNIH1O95406 144 aa15.41■□□□□ 0.06
CCDC50-202ENST00000392456 IGHV3-43DP0DP04 118 aa15.41■□□□□ 0.06
CCDC50-202ENST00000392456 UTF1Q5T230 341 aa15.41■□□□□ 0.06
CCDC50-202ENST00000392456 LYPD2Q6UXB3 125 aa15.41■□□□□ 0.06
CCDC50-202ENST00000392456 OR10AG1Q8NH19 301 aa15.41■□□□□ 0.06
CCDC50-202ENST00000392456 TMEM140Q9NV12 185 aa15.41■□□□□ 0.06
CCDC50-202ENST00000392456 OR2W1Q9Y3N9 320 aa15.41■□□□□ 0.06
CCDC50-202ENST00000392456 PGPEP1LA6NFU8 196 aa15.41■□□□□ 0.06
CCDC50-202ENST00000392456 GNB1P62873 340 aa15.41■□□□□ 0.06
CCDC50-202ENST00000392456 LRRC75BQ2VPJ9 315 aa15.41■□□□□ 0.06
CCDC50-202ENST00000392456 RNF183Q96D59 192 aa15.41■□□□□ 0.06
CCDC50-202ENST00000392456 KCNIP1Q9NZI2 227 aa15.41■□□□□ 0.06
CCDC50-202ENST00000392456 C2orf70A6NJV1 201 aa15.4■□□□□ 0.06
CCDC50-202ENST00000392456 C15orf65H3BRN8 121 aa15.4■□□□□ 0.06
CCDC50-202ENST00000392456 ADAM20O43506 726 aa15.4■□□□□ 0.06
CCDC50-202ENST00000392456 IGLV2-14P01704 120 aa15.4■□□□□ 0.06
CCDC50-202ENST00000392456 ZNF695Q8IW36 515 aa15.4■□□□□ 0.06
CCDC50-202ENST00000392456 ZNF525Q8N782 197 aa15.4■□□□□ 0.06
CCDC50-202ENST00000392456 ZNF439Q8NDP4 499 aa15.4■□□□□ 0.06
CCDC50-202ENST00000392456 ZNF418Q8TF45 676 aaPredicted RBP15.4■□□□□ 0.06
CCDC50-202ENST00000392456 GALMQ96C23 342 aa15.4■□□□□ 0.06
CCDC50-202ENST00000392456 KMT2BQ9UMN6 2715 aaPredicted RBP15.4■□□□□ 0.06
CCDC50-202ENST00000392456 MAP1AP78559 2803 aaPredicted RBP15.4■□□□□ 0.06
CCDC50-202ENST00000392456 HMGB3O15347 200 aaKnown RBP15.4■□□□□ 0.06
CCDC50-202ENST00000392456 GPR183P32249 361 aa15.4■□□□□ 0.06
CCDC50-202ENST00000392456 C11orf71Q6IPW1 123 aa15.4■□□□□ 0.06
CCDC50-202ENST00000392456 VSTM2AQ8TAG5 236 aa15.4■□□□□ 0.06
CCDC50-202ENST00000392456 SCRT2Q9NQ03 307 aa15.4■□□□□ 0.06
CCDC50-202ENST00000392456 DSCAML1Q8TD84 2053 aa15.39■□□□□ 0.05
CCDC50-202ENST00000392456 CSMD2Q7Z408 3487 aa15.39■□□□□ 0.05
CCDC50-202ENST00000392456 MT-ND6P03923 174 aa15.39■□□□□ 0.05
CCDC50-202ENST00000392456 C18orf32Q8TCD1 76 aa15.39■□□□□ 0.05
CCDC50-202ENST00000392456 ERG28Q9UKR5 140 aa15.39■□□□□ 0.05
CCDC50-202ENST00000392456 UBE2J1Q9Y385 318 aaPredicted RBP15.39■□□□□ 0.05
CCDC50-202ENST00000392456 NPIPB11E5RHQ5 1161 aa15.39■□□□□ 0.05
CCDC50-202ENST00000392456 IGHV3-7P01780 117 aa15.39■□□□□ 0.05
CCDC50-202ENST00000392456 ID1P41134 155 aa15.39■□□□□ 0.05
CCDC50-202ENST00000392456 GPR82Q96P67 336 aa15.39■□□□□ 0.05
CCDC50-202ENST00000392456 NAT8BQ9UHF3 227 aa15.39■□□□□ 0.05
CCDC50-202ENST00000392456 SPCS1Q9Y6A9 102 aa15.39■□□□□ 0.05
CCDC50-202ENST00000392456 A0A0G2JLM5 398 aa15.38■□□□□ 0.05
CCDC50-202ENST00000392456 CTXND1A0A1B0GTU2 59 aa15.38■□□□□ 0.05
CCDC50-202ENST00000392456 OR4C46A6NHA9 309 aa15.38■□□□□ 0.05
CCDC50-202ENST00000392456 C11orf94C9JXX5 98 aa15.38■□□□□ 0.05
CCDC50-202ENST00000392456 RPL32P62910 135 aaKnown RBP15.38■□□□□ 0.05
CCDC50-202ENST00000392456 NMSQ5H8A3 153 aa15.38■□□□□ 0.05
CCDC50-202ENST00000392456 ZNF295-AS1Q8N0V1 137 aa15.38■□□□□ 0.05
CCDC50-202ENST00000392456 QTRT1Q9BXR0 403 aaKnown RBP15.38■□□□□ 0.05
CCDC50-202ENST00000392456 TRAV38-1A0A0B4J264 116 aa15.38■□□□□ 0.05
CCDC50-202ENST00000392456 NXPH3O95157 252 aa15.38■□□□□ 0.05
CCDC50-202ENST00000392456 SRIP30626 198 aa15.38■□□□□ 0.05
CCDC50-202ENST00000392456 REG1BP48304 166 aa15.38■□□□□ 0.05
CCDC50-202ENST00000392456 GAGE5Q13069 117 aa15.38■□□□□ 0.05
CCDC50-202ENST00000392456 GAGE6Q13070 117 aa15.38■□□□□ 0.05
CCDC50-202ENST00000392456 FA2HQ7L5A8 372 aa15.38■□□□□ 0.05
CCDC50-202ENST00000392456 TBC1D26Q86UD7 250 aa15.38■□□□□ 0.05
CCDC50-202ENST00000392456 PPP1R35Q8TAP8 253 aa15.38■□□□□ 0.05
CCDC50-202ENST00000392456 SLC25A22Q9H936 323 aa15.38■□□□□ 0.05
CCDC50-202ENST00000392456 MED13LQ71F56 2210 aa15.38■□□□□ 0.05
CCDC50-202ENST00000392456 hDV102S1A0JD36 115 aa15.37■□□□□ 0.05
CCDC50-202ENST00000392456 H3BP45 60 aa15.37■□□□□ 0.05
CCDC50-202ENST00000392456 J3QR89 54 aa15.37■□□□□ 0.05
CCDC50-202ENST00000392456 ARL3P36405 182 aa15.37■□□□□ 0.05
CCDC50-202ENST00000392456 NAA38Q9BRA0 125 aaKnown RBP15.37■□□□□ 0.05
CCDC50-202ENST00000392456 SERTAD4Q9NUC0 356 aa15.37■□□□□ 0.05
CCDC50-202ENST00000392456 CTSZQ9UBR2 303 aa15.37■□□□□ 0.05
CCDC50-202ENST00000392456 ARL2-SNX15V9GYD0 113 aa15.37■□□□□ 0.05
CCDC50-202ENST00000392456 MALRD1Q5VYJ5 2156 aa15.37■□□□□ 0.05
CCDC50-202ENST00000392456 SRSF1Q07955 248 aaKnown RBP eCLIP15.37■□□□□ 0.05
CCDC50-202ENST00000392456 SMIM20Q8N5G0 67 aa15.37■□□□□ 0.05
CCDC50-202ENST00000392456 NEU4Q8WWR8 484 aaPredicted RBP15.37■□□□□ 0.05
CCDC50-202ENST00000392456 BMPR1BO00238 502 aa15.36■□□□□ 0.05
CCDC50-202ENST00000392456 CGB3P0DN86 165 aa15.36■□□□□ 0.05
CCDC50-202ENST00000392456 CGB7P0DN87 165 aa15.36■□□□□ 0.05
CCDC50-202ENST00000392456 USF1P22415 310 aaPredicted RBP15.36■□□□□ 0.05
CCDC50-202ENST00000392456 HTR1DP28221 377 aa15.36■□□□□ 0.05
CCDC50-202ENST00000392456 TMEM136Q6ZRR5 245 aa15.36■□□□□ 0.05
CCDC50-202ENST00000392456 OR5D13Q8NGL4 314 aa15.36■□□□□ 0.05
CCDC50-202ENST00000392456 TANC2Q9HCD6 1990 aa15.36■□□□□ 0.05
CCDC50-202ENST00000392456 A0A1W2PPM0 123 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms