RNA–Protein interactions for RNA: ENST00000391066.1

RNU6-1000P-201, Transcript of RNA, U6 small nuclear 1000, pseudogene, humanhuman

BASIC

Gene RNU6-1000P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1000P-201ENST00000391066 TMEM254Q8TBM7 123 aa0.26□□□□□ -2.37
RNU6-1000P-201ENST00000391066 BORCS7Q96B45 105 aa0.26□□□□□ -2.37
RNU6-1000P-201ENST00000391066 SLAMF6Q96DU3 332 aa0.26□□□□□ -2.37
RNU6-1000P-201ENST00000391066 RIMBP3CA6NJZ7 1639 aa0.26□□□□□ -2.37
RNU6-1000P-201ENST00000391066 RIMBP3BA6NNM3 1639 aa0.26□□□□□ -2.37
RNU6-1000P-201ENST00000391066 RIMBP3Q9UFD9 1639 aa0.26□□□□□ -2.37
RNU6-1000P-201ENST00000391066 FAT4Q6V0I7 4981 aa0.26□□□□□ -2.37
RNU6-1000P-201ENST00000391066 ARHGEF28Q8N1W1 1705 aaKnown RBP0.26□□□□□ -2.37
RNU6-1000P-201ENST00000391066 APCP25054 2843 aa0.25□□□□□ -2.37
RNU6-1000P-201ENST00000391066 TNS3Q68CZ2 1445 aa0.25□□□□□ -2.37
RNU6-1000P-201ENST00000391066 IGHV1-58A0A0C4DH39 117 aa0.25□□□□□ -2.37
RNU6-1000P-201ENST00000391066 TLCD2A6NGC4 264 aa0.25□□□□□ -2.37
RNU6-1000P-201ENST00000391066 OR2T8A6NH00 312 aa0.25□□□□□ -2.37
RNU6-1000P-201ENST00000391066 NUPR1O60356 82 aa0.25□□□□□ -2.37
RNU6-1000P-201ENST00000391066 ST6GALNAC3Q8NDV1 305 aa0.25□□□□□ -2.37
RNU6-1000P-201ENST00000391066 PARD6GQ9BYG4 376 aaPredicted RBP0.25□□□□□ -2.37
RNU6-1000P-201ENST00000391066 TAS2R7Q9NYW3 318 aa0.25□□□□□ -2.37
RNU6-1000P-201ENST00000391066 KCPQ6ZWJ8 1503 aa0.24□□□□□ -2.37
RNU6-1000P-201ENST00000391066 MED12Q93074 2177 aa0.24□□□□□ -2.37
RNU6-1000P-201ENST00000391066 hCG_1818297A0A087WSY0 165 aa0.24□□□□□ -2.37
RNU6-1000P-201ENST00000391066 TCRBV4S1A1TA0A5B7 111 aa0.24□□□□□ -2.37
RNU6-1000P-201ENST00000391066 A8MT66 165 aa0.24□□□□□ -2.37
RNU6-1000P-201ENST00000391066 KPNA3O00505 521 aaPredicted RBP0.24□□□□□ -2.37
RNU6-1000P-201ENST00000391066 PPIBP23284 216 aaKnown RBP0.24□□□□□ -2.37
RNU6-1000P-201ENST00000391066 AP3S2P59780 193 aa0.24□□□□□ -2.37
RNU6-1000P-201ENST00000391066 RHOBP62745 196 aa0.24□□□□□ -2.37
RNU6-1000P-201ENST00000391066 DYNLT1P63172 113 aa0.24□□□□□ -2.37
RNU6-1000P-201ENST00000391066 PRRT1Q99946 306 aa0.24□□□□□ -2.37
RNU6-1000P-201ENST00000391066 TMEM133Q9H2Q1 129 aa0.24□□□□□ -2.37
RNU6-1000P-201ENST00000391066 ALPK3Q96L96 1907 aa0.23□□□□□ -2.37
RNU6-1000P-201ENST00000391066 A0A087WUJ7 227 aa0.23□□□□□ -2.37
RNU6-1000P-201ENST00000391066 J3QRK9 145 aa0.23□□□□□ -2.37
RNU6-1000P-201ENST00000391066 SERPINE1P05121 402 aa0.23□□□□□ -2.37
RNU6-1000P-201ENST00000391066 SMIM17P0DL12 118 aa0.23□□□□□ -2.37
RNU6-1000P-201ENST00000391066 RNASE4P34096 147 aaKnown RBP0.23□□□□□ -2.37
RNU6-1000P-201ENST00000391066 OMPP47874 163 aa0.23□□□□□ -2.37
RNU6-1000P-201ENST00000391066 KRTAP26-1Q6PEX3 210 aa0.23□□□□□ -2.37
RNU6-1000P-201ENST00000391066 Q6Q795 121 aa0.23□□□□□ -2.37
RNU6-1000P-201ENST00000391066 LINC00575Q6W349 94 aa0.23□□□□□ -2.37
RNU6-1000P-201ENST00000391066 SLC30A7Q8NEW0 376 aa0.23□□□□□ -2.37
RNU6-1000P-201ENST00000391066 GPER1Q99527 375 aa0.23□□□□□ -2.37
RNU6-1000P-201ENST00000391066 PRADC1Q9BSG0 188 aa0.23□□□□□ -2.37
RNU6-1000P-201ENST00000391066 C14orf105Q9NVL8 296 aa0.23□□□□□ -2.37
RNU6-1000P-201ENST00000391066 ORMDL1Q9P0S3 153 aa0.23□□□□□ -2.37
RNU6-1000P-201ENST00000391066 FBXO5Q9UKT4 447 aa0.23□□□□□ -2.37
RNU6-1000P-201ENST00000391066 PHRF1Q9P1Y6 1649 aaKnown RBP0.23□□□□□ -2.37
RNU6-1000P-201ENST00000391066 A0A0D9SG42 100 aa0.22□□□□□ -2.37
RNU6-1000P-201ENST00000391066 SMIM23A6NLE4 172 aa0.22□□□□□ -2.37
RNU6-1000P-201ENST00000391066 CYB5BO43169 146 aa0.22□□□□□ -2.37
RNU6-1000P-201ENST00000391066 CIRBPQ14011 172 aaKnown RBP0.22□□□□□ -2.37
RNU6-1000P-201ENST00000391066 OR11H6Q8NGC7 330 aa0.22□□□□□ -2.37
RNU6-1000P-201ENST00000391066 OR2T35Q8NGX2 323 aa0.22□□□□□ -2.37
RNU6-1000P-201ENST00000391066 SLC25A40Q8TBP6 338 aa0.22□□□□□ -2.37
RNU6-1000P-201ENST00000391066 FAM172AQ8WUF8 416 aa0.22□□□□□ -2.37
RNU6-1000P-201ENST00000391066 LINC00052Q96N35 136 aa0.22□□□□□ -2.37
RNU6-1000P-201ENST00000391066 NIT2Q9NQR4 276 aa0.22□□□□□ -2.37
RNU6-1000P-201ENST00000391066 TVP23BQ9NYZ1 205 aa0.22□□□□□ -2.37
RNU6-1000P-201ENST00000391066 SCN10AQ9Y5Y9 1956 aa0.22□□□□□ -2.37
RNU6-1000P-201ENST00000391066 KDM6AO15550 1401 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1000P-201ENST00000391066 PIK3C2GO75747 1445 aa0.21□□□□□ -2.38
RNU6-1000P-201ENST00000391066 KMT2DO14686 5537 aa0.21□□□□□ -2.38
RNU6-1000P-201ENST00000391066 IGLV3-1P01715 115 aa0.21□□□□□ -2.38
RNU6-1000P-201ENST00000391066 C8GP07360 202 aa0.21□□□□□ -2.38
RNU6-1000P-201ENST00000391066 SRIP30626 198 aa0.21□□□□□ -2.38
RNU6-1000P-201ENST00000391066 HOXA6P31267 233 aa0.21□□□□□ -2.38
RNU6-1000P-201ENST00000391066 TRAPPC5Q8IUR0 188 aa0.21□□□□□ -2.38
RNU6-1000P-201ENST00000391066 CCDC42Q96M95 316 aa0.21□□□□□ -2.38
RNU6-1000P-201ENST00000391066 RNASE7Q9H1E1 156 aaKnown RBP0.21□□□□□ -2.38
RNU6-1000P-201ENST00000391066 IDI2-AS1Q9NZ38 188 aa0.21□□□□□ -2.38
RNU6-1000P-201ENST00000391066 NAV3Q8IVL0 2385 aa0.21□□□□□ -2.38
RNU6-1000P-201ENST00000391066 RTL1A6NKG5 1358 aa0.2□□□□□ -2.38
RNU6-1000P-201ENST00000391066 TIMM17BO60830 172 aa0.2□□□□□ -2.38
RNU6-1000P-201ENST00000391066 KRTAP2-3P0C7H8 128 aa0.2□□□□□ -2.38
RNU6-1000P-201ENST00000391066 SPINK9Q5DT21 86 aa0.2□□□□□ -2.38
RNU6-1000P-201ENST00000391066 C2orf82Q6UX34 121 aa0.2□□□□□ -2.38
RNU6-1000P-201ENST00000391066 TP53RKQ96S44 253 aa0.2□□□□□ -2.38
RNU6-1000P-201ENST00000391066 LINC00467Q9BRT7 94 aa0.2□□□□□ -2.38
RNU6-1000P-201ENST00000391066 KRTAP2-4Q9BYR9 128 aa0.2□□□□□ -2.38
RNU6-1000P-201ENST00000391066 KRTAP2-1Q9BYU5 128 aa0.2□□□□□ -2.38
RNU6-1000P-201ENST00000391066 UQCC1Q9NVA1 299 aa0.2□□□□□ -2.38
RNU6-1000P-201ENST00000391066 TNFSF18Q9UNG2 199 aa0.2□□□□□ -2.38
RNU6-1000P-201ENST00000391066 EIF5AP63241 154 aaKnown RBP0.19□□□□□ -2.38
RNU6-1000P-201ENST00000391066 HAGHLQ6PII5 290 aaPredicted RBP0.19□□□□□ -2.38
RNU6-1000P-201ENST00000391066 ZNF833PQ6ZTB9 187 aa0.19□□□□□ -2.38
RNU6-1000P-201ENST00000391066 GRINAQ7Z429 371 aa0.19□□□□□ -2.38
RNU6-1000P-201ENST00000391066 PLAC8Q9NZF1 115 aa0.19□□□□□ -2.38
RNU6-1000P-201ENST00000391066 NCOA1Q15788 1441 aa0.19□□□□□ -2.38
RNU6-1000P-201ENST00000391066 PLXNA4Q9HCM2 1894 aa0.18□□□□□ -2.38
RNU6-1000P-201ENST00000391066 ASCC3Q8N3C0 2202 aaKnown RBP0.18□□□□□ -2.38
RNU6-1000P-201ENST00000391066 IGLV3-32A0A0A0MS00 114 aa0.18□□□□□ -2.38
RNU6-1000P-201ENST00000391066 LYPLA2O95372 231 aa0.18□□□□□ -2.38
RNU6-1000P-201ENST00000391066 DEFA3P59666 94 aa0.18□□□□□ -2.38
RNU6-1000P-201ENST00000391066 RANP62826 216 aaKnown RBP0.18□□□□□ -2.38
RNU6-1000P-201ENST00000391066 EDDM3AQ14507 147 aa0.18□□□□□ -2.38
RNU6-1000P-201ENST00000391066 OR52L1Q8NGH7 329 aa0.18□□□□□ -2.38
RNU6-1000P-201ENST00000391066 TRIM4Q9C037 500 aa0.18□□□□□ -2.38
RNU6-1000P-201ENST00000391066 PSTPIP2Q9H939 334 aa0.18□□□□□ -2.38
RNU6-1000P-201ENST00000391066 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.18□□□□□ -2.38
RNU6-1000P-201ENST00000391066 PRELID3BQ9Y3B1 194 aa0.18□□□□□ -2.38
RNU6-1000P-201ENST00000391066 CITO14578 2027 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms