RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 DMDP11532 3685 aa2.77□□□□□ -1.97
TRAV39-201ENST00000390466 ZFHX2Q9C0A1 2572 aaPredicted RBP2.77□□□□□ -1.97
TRAV39-201ENST00000390466 SPEGQ15772 3267 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 A0A0G2JLM5 398 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 A0A1W2PPM0 123 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 LINC01546A6NGU7 62 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 PRSS47A8MTI9 375 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 DEFB108AA8MXU0 73 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 SRRM5B3KS81 715 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 C22orf46C9J442 243 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 E7EUB6 86 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 NTN3O00634 580 aaPredicted RBP2.76□□□□□ -1.97
TRAV39-201ENST00000390466 SMAD7O15105 426 aaKnown RBP2.76□□□□□ -1.97
TRAV39-201ENST00000390466 SIVA1O15304 175 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 KLK10O43240 276 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 MRPL33O75394 65 aaKnown RBP2.76□□□□□ -1.97
TRAV39-201ENST00000390466 MOSP00540 346 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 IGHV3-7P01780 117 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 THBDP07204 575 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 FAM106CPP0CH98 169 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 SAA2P0DJI9 122 aaPredicted RBP2.76□□□□□ -1.97
TRAV39-201ENST00000390466 MGST1P10620 155 aaKnown RBP2.76□□□□□ -1.97
TRAV39-201ENST00000390466 GP9P14770 177 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 CCNOP22674 350 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 HTR1DP28221 377 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 BMI1P35226 326 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 CFHR2P36980 270 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 GPR12P47775 334 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 ZNF138P52744 262 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 FXYD2P54710 66 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 ATP5IP56385 69 aaPredicted RBP2.76□□□□□ -1.97
TRAV39-201ENST00000390466 GNG5P63218 68 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 UBE2L3P68036 154 aaKnown RBP2.76□□□□□ -1.97
TRAV39-201ENST00000390466 LOXL1Q08397 574 aaPredicted RBP2.76□□□□□ -1.97
TRAV39-201ENST00000390466 MLANAQ16655 118 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 LGALS9BQ3B8N2 356 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 FAM106AQ4KMX7 169 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 SPRNQ5BIV9 151 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 CT45A1Q5HYN5 189 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 LGALS9CQ6DKI2 356 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 RBPMS2Q6ZRY4 209 aaKnown RBP2.76□□□□□ -1.97
TRAV39-201ENST00000390466 BHLHA15Q7RTS1 189 aaPredicted RBP2.76□□□□□ -1.97
TRAV39-201ENST00000390466 Q86TA4 180 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 GCSAMQ8N6F7 178 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 OR2Z1Q8NG97 314 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 OR5A1Q8NGJ0 315 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 OR2K2Q8NGT1 345 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 OR4A16Q8NH70 328 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 CT45A3Q8NHU0 189 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 RFESDQ8TAC1 157 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 SAP25Q8TEE9 199 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 TMEM186Q96B77 213 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 TRIB1Q96RU8 372 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 NAA38Q9BRA0 125 aaKnown RBP2.76□□□□□ -1.97
TRAV39-201ENST00000390466 CHRDL1Q9BU40 450 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 HES7Q9BYE0 225 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 ZMAT4Q9H898 229 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 ZNF71Q9NQZ8 489 aaPredicted RBP2.76□□□□□ -1.97
TRAV39-201ENST00000390466 PLSCR4Q9NRQ2 329 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 SIGLEC8Q9NYZ4 499 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 HIGD1BQ9P298 99 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 ABI3Q9P2A4 366 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 DKK4Q9UBT3 224 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 RABAC1Q9UI14 185 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 PILRBQ9UKJ0 227 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 AMMECR1Q9Y4X0 333 aaPredicted RBP2.76□□□□□ -1.97
TRAV39-201ENST00000390466 VPS13AQ96RL7 3174 aa2.76□□□□□ -1.97
TRAV39-201ENST00000390466 MAP1BP46821 2468 aaKnown RBP2.76□□□□□ -1.97
TRAV39-201ENST00000390466 LAMA1P25391 3075 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 IGKV2D-26A0A0A0MRZ7 120 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 IGHV3-64DA0A0J9YX35 117 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 TEX50A0A1B0GTY4 177 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 SPAARA0A1B0GVQ0 90 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 WI2-2373I1.2A0A1W2PRP0 233 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 TCRBV4S1A1TA0A5B7 111 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 GAGE10A6NGK3 116 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 E9PLD3 99 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 H3BUT2 72 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 K7ESF4 209 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 MRPS12O15235 138 aaKnown RBP2.75□□□□□ -1.97
TRAV39-201ENST00000390466 FCN3O75636 299 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 IGLV1-44P01699 117 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 IGLV2-23P01705 113 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 CT45A6P0DMU7 189 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 CT45A5P0DMU8 189 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 CT45A7P0DMV0 189 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 HIST1H1EP10412 219 aaKnown RBP2.75□□□□□ -1.97
TRAV39-201ENST00000390466 CCL4P13236 92 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 HLA-DRB4P13762 266 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 IGHV1-2P23083 117 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 ACP1P24666 158 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 FCGR2BP31994 310 aaPredicted RBP2.75□□□□□ -1.97
TRAV39-201ENST00000390466 CAMPP49913 170 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 TAS2R45P59539 299 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 PLP1P60201 277 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 ERVK-16P61578 105 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 PLP2Q04941 152 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 MEF2CQ06413 473 aaPredicted RBP2.75□□□□□ -1.97
TRAV39-201ENST00000390466 FOXC1Q12948 553 aa2.75□□□□□ -1.97
TRAV39-201ENST00000390466 FHL3Q13643 280 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms