RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 APOHP02749 345 aaPredicted RBP11.89□□□□□ -0.51
PSME4-201ENST00000389993 SHANK1Q9Y566 2161 aa11.89□□□□□ -0.51
PSME4-201ENST00000389993 GPX4P36969 197 aaPredicted RBP11.89□□□□□ -0.51
PSME4-201ENST00000389993 CIARTQ8N365 385 aaPredicted RBP11.89□□□□□ -0.51
PSME4-201ENST00000389993 LINC00479Q96M42 142 aa11.89□□□□□ -0.51
PSME4-201ENST00000389993 TPSG1Q9NRR2 321 aa11.89□□□□□ -0.51
PSME4-201ENST00000389993 CDK2AP1O14519 115 aa11.89□□□□□ -0.51
PSME4-201ENST00000389993 PRSS8Q16651 343 aa11.89□□□□□ -0.51
PSME4-201ENST00000389993 OR4X2Q8NGF9 303 aa11.89□□□□□ -0.51
PSME4-201ENST00000389993 MBNL3Q9NUK0 354 aaKnown RBP11.89□□□□□ -0.51
PSME4-201ENST00000389993 RNASE1P07998 156 aaKnown RBP11.88□□□□□ -0.51
PSME4-201ENST00000389993 CD7P09564 240 aa11.88□□□□□ -0.51
PSME4-201ENST00000389993 SMIM6P0DI80 62 aa11.88□□□□□ -0.51
PSME4-201ENST00000389993 MUC6Q6W4X9 2439 aa11.88□□□□□ -0.51
PSME4-201ENST00000389993 PKIAP61925 76 aa11.88□□□□□ -0.51
PSME4-201ENST00000389993 DNLZQ5SXM8 178 aa11.88□□□□□ -0.51
PSME4-201ENST00000389993 LDLRAD2Q5SZI1 272 aa11.88□□□□□ -0.51
PSME4-201ENST00000389993 PIP4P1Q86T03 277 aa11.88□□□□□ -0.51
PSME4-201ENST00000389993 ABCA4P78363 2273 aa11.88□□□□□ -0.51
PSME4-201ENST00000389993 PCNX3Q9H6A9 2034 aa11.88□□□□□ -0.51
PSME4-201ENST00000389993 RPL24P83731 157 aaKnown RBP11.88□□□□□ -0.51
PSME4-201ENST00000389993 RPP21Q9H633 154 aaKnown RBP11.88□□□□□ -0.51
PSME4-201ENST00000389993 WIPF3A6NGB9 483 aa11.88□□□□□ -0.51
PSME4-201ENST00000389993 RPP25LQ8N5L8 163 aaKnown RBP11.88□□□□□ -0.51
PSME4-201ENST00000389993 GGACTQ9BVM4 153 aa11.88□□□□□ -0.51
PSME4-201ENST00000389993 TRAV41A0A0B4J266 112 aa11.87□□□□□ -0.51
PSME4-201ENST00000389993 HERVK_113P61574 105 aa11.87□□□□□ -0.51
PSME4-201ENST00000389993 BEX4Q9NWD9 120 aaPredicted RBP11.87□□□□□ -0.51
PSME4-201ENST00000389993 ZNF106Q9H2Y7 1883 aaKnown RBP11.87□□□□□ -0.51
PSME4-201ENST00000389993 C19orf24Q9BVV8 132 aa11.87□□□□□ -0.51
PSME4-201ENST00000389993 PSMG4Q5JS54 123 aa11.87□□□□□ -0.51
PSME4-201ENST00000389993 CXCL1P09341 107 aa11.87□□□□□ -0.51
PSME4-201ENST00000389993 EPDR1Q9UM22 224 aa11.87□□□□□ -0.51
PSME4-201ENST00000389993 ZFP30Q9Y2G7 519 aa11.87□□□□□ -0.51
PSME4-201ENST00000389993 NPFFO15130 113 aa11.86□□□□□ -0.51
PSME4-201ENST00000389993 C1orf147Q96MC9 270 aaPredicted RBP11.86□□□□□ -0.51
PSME4-201ENST00000389993 PRELID3AQ96N28 172 aa11.86□□□□□ -0.51
PSME4-201ENST00000389993 TBL2Q9Y4P3 447 aaKnown RBP11.86□□□□□ -0.51
PSME4-201ENST00000389993 CACNG8Q8WXS5 425 aa11.86□□□□□ -0.51
PSME4-201ENST00000389993 A0A0G2JLM5 398 aa11.86□□□□□ -0.51
PSME4-201ENST00000389993 PAX8Q06710 450 aa11.86□□□□□ -0.51
PSME4-201ENST00000389993 TMEM136Q6ZRR5 245 aa11.86□□□□□ -0.51
PSME4-201ENST00000389993 CARHSP1Q9Y2V2 147 aaKnown RBP11.86□□□□□ -0.51
PSME4-201ENST00000389993 TMEM250H0YL14 139 aa11.86□□□□□ -0.51
PSME4-201ENST00000389993 MPZP25189 248 aa11.85□□□□□ -0.51
PSME4-201ENST00000389993 ZNF134P52741 427 aa11.85□□□□□ -0.51
PSME4-201ENST00000389993 JKAMPQ9P055 326 aa11.85□□□□□ -0.51
PSME4-201ENST00000389993 NDUFA3O95167 84 aa11.85□□□□□ -0.51
PSME4-201ENST00000389993 TRAV8-6A0A0B4J262 113 aa11.85□□□□□ -0.51
PSME4-201ENST00000389993 PRSS2P07478 247 aa11.85□□□□□ -0.51
PSME4-201ENST00000389993 COX19Q49B96 90 aa11.85□□□□□ -0.51
PSME4-201ENST00000389993 FMC1Q96HJ9 113 aa11.85□□□□□ -0.51
PSME4-201ENST00000389993 EML6Q6ZMW3 1958 aa11.85□□□□□ -0.51
PSME4-201ENST00000389993 C15orf62A8K5M9 175 aa11.85□□□□□ -0.51
PSME4-201ENST00000389993 G3V318 75 aa11.85□□□□□ -0.51
PSME4-201ENST00000389993 ASIPP42127 132 aa11.85□□□□□ -0.51
PSME4-201ENST00000389993 PRSS22Q9GZN4 317 aa11.85□□□□□ -0.51
PSME4-201ENST00000389993 FER1L6-AS1Q8NA97 138 aa11.84□□□□□ -0.51
PSME4-201ENST00000389993 TCF21O43680 179 aa11.84□□□□□ -0.51
PSME4-201ENST00000389993 TXNDC17Q9BRA2 123 aa11.84□□□□□ -0.51
PSME4-201ENST00000389993 SLC25A39Q9BZJ4 359 aaPredicted RBP11.84□□□□□ -0.51
PSME4-201ENST00000389993 NPFFR1Q9GZQ6 430 aa11.84□□□□□ -0.51
PSME4-201ENST00000389993 WDR83OSQ9Y284 106 aa11.84□□□□□ -0.51
PSME4-201ENST00000389993 SIGLEC9Q9Y336 463 aa11.84□□□□□ -0.51
PSME4-201ENST00000389993 FREM1Q5H8C1 2179 aa11.84□□□□□ -0.51
PSME4-201ENST00000389993 ERCC8Q13216 396 aa11.84□□□□□ -0.51
PSME4-201ENST00000389993 NCR2O95944 276 aa11.84□□□□□ -0.51
PSME4-201ENST00000389993 CDX1P47902 265 aaPredicted RBP11.84□□□□□ -0.51
PSME4-201ENST00000389993 TMEM131Q92545 1883 aa11.84□□□□□ -0.51
PSME4-201ENST00000389993 MT-ND6P03923 174 aa11.83□□□□□ -0.51
PSME4-201ENST00000389993 ZNF688P0C7X2 276 aa11.83□□□□□ -0.51
PSME4-201ENST00000389993 RNF182Q8N6D2 247 aa11.83□□□□□ -0.51
PSME4-201ENST00000389993 PSG8Q9UQ74 426 aa11.83□□□□□ -0.51
PSME4-201ENST00000389993 C19orf54Q5BKX5 351 aa11.83□□□□□ -0.52
PSME4-201ENST00000389993 FAM120AOSQ5T036 256 aa11.83□□□□□ -0.52
PSME4-201ENST00000389993 COL4A4P53420 1690 aaPredicted RBP11.83□□□□□ -0.52
PSME4-201ENST00000389993 SERF1AO75920 110 aa11.83□□□□□ -0.52
PSME4-201ENST00000389993 RPL35AP18077 110 aaKnown RBP11.83□□□□□ -0.52
PSME4-201ENST00000389993 Q96MF0 132 aa11.83□□□□□ -0.52
PSME4-201ENST00000389993 ATG101Q9BSB4 218 aa11.83□□□□□ -0.52
PSME4-201ENST00000389993 FGF23Q9GZV9 251 aaPredicted RBP11.83□□□□□ -0.52
PSME4-201ENST00000389993 LOC107984156A0A0G2JMH3 177 aa11.83□□□□□ -0.52
PSME4-201ENST00000389993 C17orf58Q2M2W7 97 aa11.83□□□□□ -0.52
PSME4-201ENST00000389993 SIGLEC15Q6ZMC9 328 aa11.83□□□□□ -0.52
PSME4-201ENST00000389993 GTF2H5Q6ZYL4 71 aa11.83□□□□□ -0.52
PSME4-201ENST00000389993 ARL17AQ8IVW1 177 aa11.83□□□□□ -0.52
PSME4-201ENST00000389993 RPLP1P05386 114 aaKnown RBP11.83□□□□□ -0.52
PSME4-201ENST00000389993 SAPCD1Q5SSQ6 148 aa11.83□□□□□ -0.52
PSME4-201ENST00000389993 REC114Q7Z4M0 266 aa11.83□□□□□ -0.52
PSME4-201ENST00000389993 DMRTC2Q8IXT2 367 aaPredicted RBP11.83□□□□□ -0.52
PSME4-201ENST00000389993 GLRX5Q86SX6 157 aa11.83□□□□□ -0.52
PSME4-201ENST00000389993 A0A1B0GUT8 65 aa11.82□□□□□ -0.52
PSME4-201ENST00000389993 RPL13AP40429 203 aaKnown RBP11.82□□□□□ -0.52
PSME4-201ENST00000389993 SRSF7Q16629 238 aaKnown RBP eCLIP11.82□□□□□ -0.525e-9■□□□□ 11.2
PSME4-201ENST00000389993 TMEM170BQ5T4T1 132 aa11.82□□□□□ -0.52
PSME4-201ENST00000389993 STHQ8IWL8 128 aa11.82□□□□□ -0.52
PSME4-201ENST00000389993 LRTM2Q8N967 370 aa11.82□□□□□ -0.52
PSME4-201ENST00000389993 C8orf46Q8TAG6 207 aa11.82□□□□□ -0.52
PSME4-201ENST00000389993 OTORQ9NRC9 128 aa11.82□□□□□ -0.52
PSME4-201ENST00000389993 MOB4Q9Y3A3 225 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms