RNA–Protein interactions for RNA: ENST00000389378.6

TNIP1-202, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-202ENST00000389378 EPDR1Q9UM22 224 aa13.15□□□□□ -0.3
TNIP1-202ENST00000389378 ZNF835Q9Y2P0 537 aa13.15□□□□□ -0.3
TNIP1-202ENST00000389378 MRPS16Q9Y3D3 137 aaKnown RBP13.15□□□□□ -0.3
TNIP1-202ENST00000389378 ENSAO43768 121 aaKnown RBP13.14□□□□□ -0.31
TNIP1-202ENST00000389378 CEACAM8P31997 349 aaPredicted RBP13.14□□□□□ -0.31
TNIP1-202ENST00000389378 FAM27E3Q08E93 113 aa13.14□□□□□ -0.31
TNIP1-202ENST00000389378 UBE2V1Q13404 147 aa13.14□□□□□ -0.31
TNIP1-202ENST00000389378 OR10X1Q8NGY0 326 aa13.14□□□□□ -0.31
TNIP1-202ENST00000389378 RAB9BQ9NP90 201 aa13.14□□□□□ -0.31
TNIP1-202ENST00000389378 WASHC3Q9Y3C0 194 aa13.14□□□□□ -0.31
TNIP1-202ENST00000389378 FAM87AP0C7U9 286 aa13.14□□□□□ -0.31
TNIP1-202ENST00000389378 ZNF788Q6ZQV5 615 aa13.14□□□□□ -0.31
TNIP1-202ENST00000389378 WIPF2Q8TF74 440 aaPredicted RBP13.14□□□□□ -0.31
TNIP1-202ENST00000389378 GTSF1Q8WW33 167 aa13.14□□□□□ -0.31
TNIP1-202ENST00000389378 TCRBV4S1A1TA0A5B7 111 aa13.13□□□□□ -0.31
TNIP1-202ENST00000389378 BPIFB3P59826 476 aa13.13□□□□□ -0.31
TNIP1-202ENST00000389378 TMEM177Q53S58 311 aa13.13□□□□□ -0.31
TNIP1-202ENST00000389378 CACNG8Q8WXS5 425 aa13.13□□□□□ -0.31
TNIP1-202ENST00000389378 ZNF714Q96N38 554 aa13.13□□□□□ -0.31
TNIP1-202ENST00000389378 ACACAQ13085 2346 aa13.13□□□□□ -0.31
TNIP1-202ENST00000389378 NKX6-3A6NJ46 265 aa13.13□□□□□ -0.31
TNIP1-202ENST00000389378 C19orf67A6NJJ6 358 aa13.13□□□□□ -0.31
TNIP1-202ENST00000389378 DEFB109BQ30KR1 87 aa13.13□□□□□ -0.31
TNIP1-202ENST00000389378 FAM231DQ6ZW35 169 aa13.13□□□□□ -0.31
TNIP1-202ENST00000389378 OR1L4Q8NGR5 311 aa13.13□□□□□ -0.31
TNIP1-202ENST00000389378 LOXL4Q96JB6 756 aa13.13□□□□□ -0.31
TNIP1-202ENST00000389378 RIF1Q5UIP0 2472 aaKnown RBP13.13□□□□□ -0.31
TNIP1-202ENST00000389378 LOC105371242A0A075B767 164 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 hADV38S2A0JD32 116 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 IGLC7A0M8Q6 106 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 C22orf46C9J442 243 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 SNAI2O43623 268 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 NUDT3O95989 172 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 OR4C5Q8NGB2 326 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 SSUH2Q9Y2M2 353 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 SELENOKQ9Y6D0 94 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 TRAV17A0A0B4J275 112 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 HBBP68871 147 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 FBLN7Q53RD9 439 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 OSR1Q8TAX0 266 aaPredicted RBP13.12□□□□□ -0.31
TNIP1-202ENST00000389378 FAM222BQ8WU58 562 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 ZC2HC1AQ96GY0 325 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 PRO3102Q9H379 93 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 C7orf69Q9H7B7 122 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 IGHV1-24A0A0C4DH33 117 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 CBY3A6NI87 242 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 NBEAP1P0C6P0 100 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 RBX1P62877 108 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 KLF5Q13887 457 aaPredicted RBP13.12□□□□□ -0.31
TNIP1-202ENST00000389378 ZGRF1Q86YA3 2104 aa13.12□□□□□ -0.31
TNIP1-202ENST00000389378 COLQQ9Y215 455 aaPredicted RBP13.12□□□□□ -0.31
TNIP1-202ENST00000389378 TMEM265A0A087WTH1 108 aa13.11□□□□□ -0.31
TNIP1-202ENST00000389378 LEPROTL1O95214 131 aa13.11□□□□□ -0.31
TNIP1-202ENST00000389378 FSTL3O95633 263 aa13.11□□□□□ -0.31
TNIP1-202ENST00000389378 P01737 135 aa13.11□□□□□ -0.31
TNIP1-202ENST00000389378 TCTAP57738 103 aa13.11□□□□□ -0.31
TNIP1-202ENST00000389378 A0A1W2PPI3 338 aa13.11□□□□□ -0.31
TNIP1-202ENST00000389378 TNFSF4P23510 183 aa13.11□□□□□ -0.31
TNIP1-202ENST00000389378 FAM120AOSQ5T036 256 aa13.11□□□□□ -0.31
TNIP1-202ENST00000389378 ZNF833PQ6ZTB9 187 aa13.11□□□□□ -0.31
TNIP1-202ENST00000389378 CIARTQ8N365 385 aaPredicted RBP13.11□□□□□ -0.31
TNIP1-202ENST00000389378 MUC15Q8N387 334 aa13.11□□□□□ -0.31
TNIP1-202ENST00000389378 GUCD1Q96NT3 240 aa13.11□□□□□ -0.31
TNIP1-202ENST00000389378 GPR82Q96P67 336 aa13.11□□□□□ -0.31
TNIP1-202ENST00000389378 RPP21Q9H633 154 aaKnown RBP13.11□□□□□ -0.31
TNIP1-202ENST00000389378 FCN3O75636 299 aa13.1□□□□□ -0.31
TNIP1-202ENST00000389378 OR2J3O76001 311 aa13.1□□□□□ -0.31
TNIP1-202ENST00000389378 SP9P0CG40 484 aa13.1□□□□□ -0.31
TNIP1-202ENST00000389378 IGHV1-69-2A0A0G2JMI3 117 aa13.1□□□□□ -0.31
TNIP1-202ENST00000389378 A0A1B0GXF2 115 aa13.1□□□□□ -0.31
TNIP1-202ENST00000389378 TMEM200BQ69YZ2 307 aa13.1□□□□□ -0.31
TNIP1-202ENST00000389378 RASL11AQ6T310 242 aa13.1□□□□□ -0.31
TNIP1-202ENST00000389378 DAZAP1Q96EP5 407 aaKnown RBP13.1□□□□□ -0.31
TNIP1-202ENST00000389378 IGLV3-9A0A075B6K5 115 aa13.09□□□□□ -0.31
TNIP1-202ENST00000389378 SYS1-DBNDD2H3BUS1 97 aa13.09□□□□□ -0.31
TNIP1-202ENST00000389378 TIMM23BQ5SRD1 257 aa13.09□□□□□ -0.31
TNIP1-202ENST00000389378 CCL17Q92583 94 aa13.09□□□□□ -0.31
TNIP1-202ENST00000389378 MALRD1Q5VYJ5 2156 aa13.09□□□□□ -0.31
TNIP1-202ENST00000389378 OR5AN1Q8NGI8 311 aa13.09□□□□□ -0.31
TNIP1-202ENST00000389378 OR4C13Q8NGP0 309 aa13.09□□□□□ -0.31
TNIP1-202ENST00000389378 TPPP3Q9BW30 176 aa13.09□□□□□ -0.31
TNIP1-202ENST00000389378 APC2O95996 2303 aa13.09□□□□□ -0.31
TNIP1-202ENST00000389378 WNK2Q9Y3S1 2297 aa13.09□□□□□ -0.31
TNIP1-202ENST00000389378 CHEK1O14757 476 aa13.09□□□□□ -0.31
TNIP1-202ENST00000389378 CNTFRP26992 372 aa13.09□□□□□ -0.31
TNIP1-202ENST00000389378 C22orf15Q8WYQ4 148 aa13.09□□□□□ -0.31
TNIP1-202ENST00000389378 LINC00312Q9Y6C7 94 aa13.09□□□□□ -0.31
TNIP1-202ENST00000389378 ANKRD11Q6UB99 2663 aaPredicted RBP13.09□□□□□ -0.31
TNIP1-202ENST00000389378 MUC21A0A0G2JKD1 596 aa13.08□□□□□ -0.32
TNIP1-202ENST00000389378 MUC21A0A140T8X8 626 aa13.08□□□□□ -0.32
TNIP1-202ENST00000389378 OR2T8A6NH00 312 aa13.08□□□□□ -0.32
TNIP1-202ENST00000389378 SUB1P53999 127 aaKnown RBP eCLIP13.08□□□□□ -0.32
TNIP1-202ENST00000389378 FOXE3Q13461 319 aa13.08□□□□□ -0.32
TNIP1-202ENST00000389378 MUC21Q5SSG8 566 aa13.08□□□□□ -0.32
TNIP1-202ENST00000389378 LYPD2Q6UXB3 125 aa13.08□□□□□ -0.32
TNIP1-202ENST00000389378 EXOC3-AS1Q8N2X6 119 aa13.08□□□□□ -0.32
TNIP1-202ENST00000389378 LOC102724200A0A096LPH7 203 aaPredicted RBP13.08□□□□□ -0.32
TNIP1-202ENST00000389378 A8MWL6 223 aa13.08□□□□□ -0.32
TNIP1-202ENST00000389378 TOMM40O96008 361 aa13.08□□□□□ -0.32
TNIP1-202ENST00000389378 MYCNOSP40205 109 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms