RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 IGKV1-9A0A0C4DH69 117 aa12.83□□□□□ -0.35
ALK-201ENST00000389048 C8orf46Q8TAG6 207 aa12.83□□□□□ -0.35
ALK-201ENST00000389048 IGHV1-18A0A0C4DH31 117 aa12.83□□□□□ -0.36
ALK-201ENST00000389048 ORMDL2Q53FV1 153 aa12.83□□□□□ -0.36
ALK-201ENST00000389048 HEPN1Q6WQI6 88 aa12.83□□□□□ -0.36
ALK-201ENST00000389048 PRSS22Q9GZN4 317 aa12.83□□□□□ -0.36
ALK-201ENST00000389048 IGLV3-21P80748 117 aaPredicted RBP12.83□□□□□ -0.36
ALK-201ENST00000389048 TMEM256Q8N2U0 113 aa12.83□□□□□ -0.36
ALK-201ENST00000389048 GNB1LQ9BYB4 327 aa12.83□□□□□ -0.36
ALK-201ENST00000389048 MS4A6AQ9H2W1 248 aa12.83□□□□□ -0.36
ALK-201ENST00000389048 TEX38Q6PEX7 206 aa12.83□□□□□ -0.36
ALK-201ENST00000389048 SLC50A1Q9BRV3 221 aa12.83□□□□□ -0.36
ALK-201ENST00000389048 RGPD3A6NKT7 1758 aaPredicted RBP12.83□□□□□ -0.36
ALK-201ENST00000389048 DLEC1Q9Y238 1755 aa12.83□□□□□ -0.36
ALK-201ENST00000389048 IGFBP3P17936 291 aaPredicted RBP12.82□□□□□ -0.36
ALK-201ENST00000389048 A0A087WX48 190 aa12.82□□□□□ -0.36
ALK-201ENST00000389048 ERCC8Q13216 396 aa12.82□□□□□ -0.36
ALK-201ENST00000389048 PVRIGQ6DKI7 326 aa12.82□□□□□ -0.36
ALK-201ENST00000389048 SPXQ9BT56 116 aa12.82□□□□□ -0.36
ALK-201ENST00000389048 THBDP07204 575 aa12.82□□□□□ -0.36
ALK-201ENST00000389048 F5P12259 2224 aa12.82□□□□□ -0.36
ALK-201ENST00000389048 TRGV11A0A075B6L2 103 aa12.82□□□□□ -0.36
ALK-201ENST00000389048 HSD52Q0P140 79 aa12.82□□□□□ -0.36
ALK-201ENST00000389048 FOXF2Q12947 444 aa12.82□□□□□ -0.36
ALK-201ENST00000389048 SUMO4Q6EEV6 95 aa12.82□□□□□ -0.36
ALK-201ENST00000389048 TSKUQ8WUA8 353 aa12.82□□□□□ -0.36
ALK-201ENST00000389048 C1orf159Q96HA4 380 aa12.82□□□□□ -0.36
ALK-201ENST00000389048 C15orf32Q32M92 178 aa12.81□□□□□ -0.36
ALK-201ENST00000389048 C14orf178Q8N769 122 aaPredicted RBP12.81□□□□□ -0.36
ALK-201ENST00000389048 ANKRD36A6QL64 1941 aa12.81□□□□□ -0.36
ALK-201ENST00000389048 A0A1W2PR77 199 aa12.81□□□□□ -0.36
ALK-201ENST00000389048 SH2D1AO60880 128 aa12.81□□□□□ -0.36
ALK-201ENST00000389048 TRAV9-1A0A075B6T8 112 aa12.81□□□□□ -0.36
ALK-201ENST00000389048 SPINK8P0C7L1 97 aa12.81□□□□□ -0.36
ALK-201ENST00000389048 ATP5IP56385 69 aaPredicted RBP12.81□□□□□ -0.36
ALK-201ENST00000389048 SSBP2P81877 361 aaPredicted RBP12.81□□□□□ -0.36
ALK-201ENST00000389048 PDCD11Q14690 1871 aaKnown RBP12.81□□□□□ -0.36
ALK-201ENST00000389048 TUBGCP6Q96RT7 1819 aa12.81□□□□□ -0.36
ALK-201ENST00000389048 YPEL1O60688 119 aa12.81□□□□□ -0.36
ALK-201ENST00000389048 ZNF329Q86UD4 541 aa12.81□□□□□ -0.36
ALK-201ENST00000389048 CHCHD1Q96BP2 118 aaKnown RBP12.81□□□□□ -0.36
ALK-201ENST00000389048 YPEL2Q96QA6 119 aa12.81□□□□□ -0.36
ALK-201ENST00000389048 OSTCQ9NRP0 149 aa12.81□□□□□ -0.36
ALK-201ENST00000389048 TNFSF13O75888 250 aa12.81□□□□□ -0.36
ALK-201ENST00000389048 CSTL1Q9H114 145 aa12.81□□□□□ -0.36
ALK-201ENST00000389048 RP1P56715 2156 aa12.81□□□□□ -0.36
ALK-201ENST00000389048 FOXG1P55316 489 aaPredicted RBP12.8□□□□□ -0.36
ALK-201ENST00000389048 NRN1LQ496H8 165 aa12.8□□□□□ -0.36
ALK-201ENST00000389048 PRADC1Q9BSG0 188 aa12.8□□□□□ -0.36
ALK-201ENST00000389048 SRRM4A7MD48 611 aaKnown RBP12.8□□□□□ -0.36
ALK-201ENST00000389048 LGALS1P09382 135 aaKnown RBP12.8□□□□□ -0.36
ALK-201ENST00000389048 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.8□□□□□ -0.36
ALK-201ENST00000389048 MPV17L2Q567V2 206 aa12.8□□□□□ -0.36
ALK-201ENST00000389048 MGST2Q99735 147 aa12.8□□□□□ -0.36
ALK-201ENST00000389048 DUSP14O95147 198 aaKnown RBP12.8□□□□□ -0.36
ALK-201ENST00000389048 ARHGEF17Q96PE2 2063 aaPredicted RBP12.8□□□□□ -0.36
ALK-201ENST00000389048 DUTP33316 252 aaKnown RBP12.79□□□□□ -0.36
ALK-201ENST00000389048 TREML4Q6UXN2 200 aa12.79□□□□□ -0.36
ALK-201ENST00000389048 RSPO3Q9BXY4 272 aaPredicted RBP12.79□□□□□ -0.36
ALK-201ENST00000389048 METRNQ9UJH8 293 aa12.79□□□□□ -0.36
ALK-201ENST00000389048 VWC2LB2RUY7 222 aa12.79□□□□□ -0.36
ALK-201ENST00000389048 TRAV41A0A0B4J266 112 aa12.79□□□□□ -0.36
ALK-201ENST00000389048 PSG3Q16557 428 aa12.79□□□□□ -0.36
ALK-201ENST00000389048 MORN3Q6PF18 240 aaPredicted RBP12.79□□□□□ -0.36
ALK-201ENST00000389048 GFI1Q99684 422 aa12.79□□□□□ -0.36
ALK-201ENST00000389048 MBNL3Q9NUK0 354 aaKnown RBP12.79□□□□□ -0.36
ALK-201ENST00000389048 PRCDQ00LT1 54 aa12.79□□□□□ -0.36
ALK-201ENST00000389048 TEX43Q6ZNM6 134 aa12.78□□□□□ -0.36
ALK-201ENST00000389048 FAM90A2PQ658T7 463 aa12.78□□□□□ -0.36
ALK-201ENST00000389048 PAQR4Q8N4S7 273 aaPredicted RBP12.78□□□□□ -0.36
ALK-201ENST00000389048 TMEM158Q8WZ71 300 aa12.78□□□□□ -0.36
ALK-201ENST00000389048 IGHV1-46P01743 117 aa12.78□□□□□ -0.36
ALK-201ENST00000389048 RPL32P62910 135 aaKnown RBP12.78□□□□□ -0.36
ALK-201ENST00000389048 IGHV3-16A0A0C4DH30 117 aa12.78□□□□□ -0.36
ALK-201ENST00000389048 WNT2P09544 360 aa12.78□□□□□ -0.36
ALK-201ENST00000389048 TMEM200BQ69YZ2 307 aa12.78□□□□□ -0.36
ALK-201ENST00000389048 COLCA2A8K830 154 aa12.78□□□□□ -0.36
ALK-201ENST00000389048 ADAMTSL5Q6ZMM2 481 aa12.78□□□□□ -0.36
ALK-201ENST00000389048 HAPLN4Q86UW8 402 aa12.78□□□□□ -0.36
ALK-201ENST00000389048 ZNF581Q9P0T4 197 aa12.78□□□□□ -0.36
ALK-201ENST00000389048 TMEM238C9JI98 176 aa12.77□□□□□ -0.36
ALK-201ENST00000389048 ZNF114Q8NC26 417 aa12.77□□□□□ -0.36
ALK-201ENST00000389048 NUP35Q8NFH5 326 aa12.77□□□□□ -0.36
ALK-201ENST00000389048 POLR2AP24928 1970 aaKnown RBP12.77□□□□□ -0.36
ALK-201ENST00000389048 IGHV2-26A0A0B4J1V2 119 aa12.77□□□□□ -0.36
ALK-201ENST00000389048 F8VVB4 439 aa12.77□□□□□ -0.36
ALK-201ENST00000389048 F8VWA3 439 aa12.77□□□□□ -0.36
ALK-201ENST00000389048 C6orf226Q5I0X4 101 aa12.77□□□□□ -0.36
ALK-201ENST00000389048 ASPHD1Q5U4P2 390 aa12.77□□□□□ -0.36
ALK-201ENST00000389048 COL11A1P12107 1806 aaPredicted RBP12.77□□□□□ -0.36
ALK-201ENST00000389048 ATAD5Q96QE3 1844 aa12.77□□□□□ -0.37
ALK-201ENST00000389048 KIR3DS1Q14943 382 aa12.77□□□□□ -0.37
ALK-201ENST00000389048 MYOFQ9NZM1 2061 aa12.77□□□□□ -0.37
ALK-201ENST00000389048 MARF1Q9Y4F3 1742 aaKnown RBP12.77□□□□□ -0.37
ALK-201ENST00000389048 KNCNA6PVL3 124 aa12.77□□□□□ -0.37
ALK-201ENST00000389048 LY6HO94772 140 aa12.77□□□□□ -0.37
ALK-201ENST00000389048 DEFB130BP0DP73 79 aa12.76□□□□□ -0.37
ALK-201ENST00000389048 DEFB130AP0DP74 79 aa12.76□□□□□ -0.37
ALK-201ENST00000389048 MLANAQ16655 118 aa12.76□□□□□ -0.37
ALK-201ENST00000389048 TPRP12270 2363 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms