RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 DTX1Q86Y01 620 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 SRSF8Q9BRL6 282 aaKnown RBP7.95□□□□□ -1.14
SNX1-202ENST00000380285 NKX2-8O15522 239 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 FAM231BA6NCW3 169 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 TMEM86BQ8N661 226 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 SYS1-DBNDD2H3BUS1 97 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 LGALS1P09382 135 aaKnown RBP7.95□□□□□ -1.14
SNX1-202ENST00000380285 COX6B1P14854 86 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 PSMB11A5LHX3 300 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 A8MWP6 167 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 PRR32B1ATL7 298 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 FOXL2P58012 376 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 CKS1BP61024 79 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 SPTBN1Q01082 2364 aaKnown RBP7.95□□□□□ -1.14
SNX1-202ENST00000380285 COL4A5P29400 1685 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 OR9G9P0C7N8 305 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 GNG5P63218 68 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 SPANXCQ9NY87 97 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 SPAARA0A1B0GVQ0 90 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 MMP23AO75900 390 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 SSBP2P81877 361 aaPredicted RBP7.95□□□□□ -1.14
SNX1-202ENST00000380285 COX11Q9Y6N1 276 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 RIPPLY3P57055 190 aa7.94□□□□□ -1.14
SNX1-202ENST00000380285 CENPVQ7Z7K6 275 aaPredicted RBP7.94□□□□□ -1.14
SNX1-202ENST00000380285 RPP25LQ8N5L8 163 aaKnown RBP7.94□□□□□ -1.14
SNX1-202ENST00000380285 DCTN5Q9BTE1 182 aa7.94□□□□□ -1.14
SNX1-202ENST00000380285 CEP250Q9BV73 2442 aa7.94□□□□□ -1.14
SNX1-202ENST00000380285 IGHV3OR16-12A0A075B7B8 117 aa7.94□□□□□ -1.14
SNX1-202ENST00000380285 TIAF1O95411 115 aa7.94□□□□□ -1.14
SNX1-202ENST00000380285 FAM90A2PQ658T7 463 aa7.94□□□□□ -1.14
SNX1-202ENST00000380285 ZGRF1Q86YA3 2104 aa7.94□□□□□ -1.14
SNX1-202ENST00000380285 OOSP1A8MZH6 123 aa7.94□□□□□ -1.14
SNX1-202ENST00000380285 GAGE1Q13065 139 aa7.94□□□□□ -1.14
SNX1-202ENST00000380285 FLVCR1-AS1Q8TAF5 88 aa7.94□□□□□ -1.14
SNX1-202ENST00000380285 TDGF1P3P51864 188 aa7.94□□□□□ -1.14
SNX1-202ENST00000380285 CMC4P56277 68 aaPredicted RBP7.94□□□□□ -1.14
SNX1-202ENST00000380285 FAM216BQ8N7L0 139 aa7.94□□□□□ -1.14
SNX1-202ENST00000380285 TMEM167AQ8TBQ9 72 aa7.94□□□□□ -1.14
SNX1-202ENST00000380285 QRFPP83859 136 aa7.94□□□□□ -1.14
SNX1-202ENST00000380285 TMEM42Q69YG0 159 aa7.94□□□□□ -1.14
SNX1-202ENST00000380285 BCL6BQ8N143 479 aaPredicted RBP7.94□□□□□ -1.14
SNX1-202ENST00000380285 IGHV4-39P01824 125 aa7.93□□□□□ -1.14
SNX1-202ENST00000380285 C10orf91Q5T1B1 145 aa7.93□□□□□ -1.14
SNX1-202ENST00000380285 GAGE12BA1L429 117 aa7.93□□□□□ -1.14
SNX1-202ENST00000380285 GATA2P23769 480 aaPredicted RBP7.93□□□□□ -1.14
SNX1-202ENST00000380285 PCNX2A6NKB5 2137 aa7.93□□□□□ -1.14
SNX1-202ENST00000380285 DEPPQ9NTK1 212 aa7.93□□□□□ -1.14
SNX1-202ENST00000380285 CD7P09564 240 aa7.93□□□□□ -1.14
SNX1-202ENST00000380285 PYYP10082 97 aa7.93□□□□□ -1.14
SNX1-202ENST00000380285 PDE6HQ13956 83 aa7.93□□□□□ -1.14
SNX1-202ENST00000380285 NUP35Q8NFH5 326 aa7.93□□□□□ -1.14
SNX1-202ENST00000380285 CCL19Q99731 98 aa7.93□□□□□ -1.14
SNX1-202ENST00000380285 ITGB1BP1O14713 200 aa7.93□□□□□ -1.14
SNX1-202ENST00000380285 BSPH1Q075Z2 132 aa7.93□□□□□ -1.14
SNX1-202ENST00000380285 GUSBP1Q15486 140 aa7.93□□□□□ -1.14
SNX1-202ENST00000380285 SRRM5B3KS81 715 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 ATP5J2P56134 94 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 SPSB3Q6PJ21 355 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 CLEC19AQ6UXS0 136 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 SIGLEC12Q96PQ1 595 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 IGKV1D-8A0A087WSZ0 117 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 C3orf79P0CE67 100 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 ZNF664Q8N3J9 261 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 A0A0G2JMM0 328 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 A0A1W2PPB8 328 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 KIR3DP1A8MWS1 328 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 WDR90Q96KV7 1748 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 BOD1L2Q8IYS8 172 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 PHLDA1Q8WV24 401 aaPredicted RBP7.92□□□□□ -1.14
SNX1-202ENST00000380285 VSIRQ9H7M9 311 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 TOMM40O96008 361 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 RPUSD1Q9UJJ7 312 aaKnown RBP7.92□□□□□ -1.14
SNX1-202ENST00000380285 TRBV20-1A0A075B6N2 111 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 TRAV2A0A0B4J234 112 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 TCRAP04437 139 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 IGKV3OR2-268A0A0C4DH90 116 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 CD28P10747 220 aa7.92□□□□□ -1.14
SNX1-202ENST00000380285 A6NNC1 897 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 NABP1Q96AH0 204 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 MBNL3Q9NUK0 354 aaKnown RBP7.91□□□□□ -1.14
SNX1-202ENST00000380285 NCKAP5O14513 1909 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 LINC01587Q99440 93 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 D6R8Y8 96 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 CRPP02741 224 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 TDGF1P13385 188 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 CFHR1Q03591 330 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 KIR3DS1Q14943 382 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 TMEM249Q2WGJ8 235 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 SPATA31B1PQ5VZV4 182 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 ASCL4Q6XD76 172 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 WNK2Q9Y3S1 2297 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 VCYO14598 125 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 DTX2Q86UW9 622 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 FDCSPQ8NFU4 85 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 ZNF837Q96EG3 531 aaPredicted RBP7.91□□□□□ -1.14
SNX1-202ENST00000380285 LINC00477Q96M19 166 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 VWA8A3KMH1 1905 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 A0A1B0GWJ7 208 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 SIGLEC15Q6ZMC9 328 aa7.91□□□□□ -1.14
SNX1-202ENST00000380285 ZNF319Q9P2F9 582 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms