RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 SGMS2Q8NHU3 365 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 C8orf46Q8TAG6 207 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 FANCD2OSQ96PS1 177 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 CHODLQ9H9P2 273 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 CBLN4Q9NTU7 201 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 CLEC5AQ9NY25 188 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 COL12A1Q99715 3063 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 DLEU1O43261 78 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 FABP4P15090 132 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 CD24P25063 80 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 RPL27AP46776 148 aaKnown RBP6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 KLRD1Q13241 179 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 ACTL10Q5JWF8 245 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 PPP1R27Q86WC6 154 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 MMD2Q8IY49 270 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 THAP8Q8NA92 274 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 RPEQ96AT9 228 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 C19orf24Q9BVV8 132 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 RAB1BQ9H0U4 201 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 ZNF355PQ9NSJ1 428 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 TEX22C9J3V5 150 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 NDUFS7O75251 213 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 TYMSP04818 313 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 COMPP49747 757 aaPredicted RBP6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 TAS2R45P59539 299 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 SLAQ13239 276 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 ASPHD1Q5U4P2 390 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 KCNIP4Q6PIL6 250 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 OR5AU1Q8NGC0 362 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 ZNF48Q96MX3 618 aaPredicted RBP6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 ELOA3CA0A087WX78 387 aaPredicted RBP6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 A0A1W2PRD5 423 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 A0A1W2PRF3 423 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 A0A1W2PRM7 423 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 HELTA6NFD8 242 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 C9JCJ5 164 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 TIMM23O14925 209 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 COX7A2P2O60397 106 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 PAX1P15863 534 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 S100A2P29034 98 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 FOXL1Q12952 345 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 CENPWQ5EE01 88 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 C10orf113Q5VZT2 155 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 PVRIGQ6DKI7 326 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 OR10G8Q8NGN5 311 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 LINC00479Q96M42 142 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 HILPDAQ9Y5L2 63 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 RBP4P02753 201 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 PPBPP02775 128 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 FRMD6-AS1P0C7T7 363 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 RPL15P61313 204 aaKnown RBP6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 UBE2L3P68036 154 aaKnown RBP6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 HIST1H2BLQ99880 126 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 MRPL32Q9BYC8 188 aaKnown RBP6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 TNFRSF19Q9NS68 423 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 PITPNC1Q9UKF7 332 aa6.35□□□□□ -1.39
PDLIM5-204ENST00000380176 ORM2P19652 201 aa6.34□□□□□ -1.39
PDLIM5-204ENST00000380176 GNG4P50150 75 aa6.34□□□□□ -1.39
PDLIM5-204ENST00000380176 LCN2P80188 198 aa6.34□□□□□ -1.39
PDLIM5-204ENST00000380176 LINC00305Q7Z4B0 112 aa6.34□□□□□ -1.39
PDLIM5-204ENST00000380176 ARL2-SNX15V9GYD0 113 aa6.34□□□□□ -1.39
PDLIM5-204ENST00000380176 A0A1W2PRE2 83 aa6.34□□□□□ -1.39
PDLIM5-204ENST00000380176 IGLV2-8P01709 118 aa6.34□□□□□ -1.39
PDLIM5-204ENST00000380176 CDKN1AP38936 164 aa6.34□□□□□ -1.39
PDLIM5-204ENST00000380176 TPTE2P1Q5T6R2 138 aa6.34□□□□□ -1.39
PDLIM5-204ENST00000380176 TMEM183AQ8IXX5 376 aa6.34□□□□□ -1.39
PDLIM5-204ENST00000380176 OR1P1Q8NH06 330 aa6.34□□□□□ -1.39
PDLIM5-204ENST00000380176 SRSF12Q8WXF0 261 aaKnown RBP6.34□□□□□ -1.39
PDLIM5-204ENST00000380176 IMMP2LQ96T52 175 aa6.34□□□□□ -1.39
PDLIM5-204ENST00000380176 RNASE7Q9H1E1 156 aaKnown RBP6.34□□□□□ -1.39
PDLIM5-204ENST00000380176 A0A1B0GUS0 222 aa6.34□□□□□ -1.4
PDLIM5-204ENST00000380176 ERVFC1-1P60608 527 aa6.34□□□□□ -1.4
PDLIM5-204ENST00000380176 NHLRC2Q8NBF2 726 aa6.34□□□□□ -1.4
PDLIM5-204ENST00000380176 OR1B1Q8NGR6 318 aa6.34□□□□□ -1.4
PDLIM5-204ENST00000380176 CFHR4Q92496 578 aa6.34□□□□□ -1.4
PDLIM5-204ENST00000380176 TIMD4Q96H15 378 aa6.34□□□□□ -1.4
PDLIM5-204ENST00000380176 PAXXQ9BUH6 204 aa6.34□□□□□ -1.4
PDLIM5-204ENST00000380176 SSBP3Q9BWW4 388 aaPredicted RBP6.34□□□□□ -1.4
PDLIM5-204ENST00000380176 TRAPPC1Q9Y5R8 145 aa6.34□□□□□ -1.4
PDLIM5-204ENST00000380176 F11RQ9Y624 299 aaKnown RBP6.34□□□□□ -1.4
PDLIM5-204ENST00000380176 V9GYV3 84 aa6.34□□□□□ -1.4
PDLIM5-204ENST00000380176 RD3LP0DJH9 198 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 FXYD3Q14802 87 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 PLGLAQ15195 96 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 LEMD1Q68G75 181 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 PET117Q6UWS5 81 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 TMEM116Q8NCL8 245 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 OR2D3Q8NGH3 330 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 OR1L4Q8NGR5 311 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 DPF1Q92782 380 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 FXYD5Q96DB9 178 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 PACRGQ96M98 296 aaPredicted RBP6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 IL36BQ9NZH7 164 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 NAGKQ9UJ70 344 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 AMMECR1Q9Y4X0 333 aaPredicted RBP6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 LY96Q9Y6Y9 160 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 LOC105371242A0A075B767 164 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 AMBPP02760 352 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 CLEC3BP05452 202 aa6.33□□□□□ -1.4
PDLIM5-204ENST00000380176 HTR1DP28221 377 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms