RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 FBXL15Q9H469 300 aa9.27□□□□□ -0.93
SMAD9-202ENST00000379826 LY96Q9Y6Y9 160 aa9.27□□□□□ -0.93
SMAD9-202ENST00000379826 ESPL1Q14674 2120 aa9.27□□□□□ -0.93
SMAD9-202ENST00000379826 IGKV3-15P01624 115 aa9.27□□□□□ -0.93
SMAD9-202ENST00000379826 RPL24P83731 157 aaKnown RBP9.27□□□□□ -0.93
SMAD9-202ENST00000379826 C2orf83Q53S99 150 aa9.27□□□□□ -0.93
SMAD9-202ENST00000379826 KIR2DL5BA0A0G2JN68 375 aa9.27□□□□□ -0.93
SMAD9-202ENST00000379826 KIR2DL5BA0A0G2JPC4 375 aa9.27□□□□□ -0.93
SMAD9-202ENST00000379826 FBLL1A6NHQ2 334 aaKnown RBP9.27□□□□□ -0.93
SMAD9-202ENST00000379826 CGB1A6NKQ9 187 aa9.27□□□□□ -0.93
SMAD9-202ENST00000379826 KIR2DL5AQ8N109 375 aa9.27□□□□□ -0.93
SMAD9-202ENST00000379826 TMUB1Q9BVT8 246 aa9.27□□□□□ -0.93
SMAD9-202ENST00000379826 ZNF407Q9C0G0 2248 aa9.27□□□□□ -0.93
SMAD9-202ENST00000379826 TRBV20OR9-2A0A075B6H5 130 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 A6NDN8 102 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 TM4SF5O14894 197 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 CA7P43166 264 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 TM4SF20Q53R12 229 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 CIARTQ8N365 385 aaPredicted RBP9.26□□□□□ -0.93
SMAD9-202ENST00000379826 CACNG8Q8WXS5 425 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 LINC00312Q9Y6C7 94 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 ATG2AQ2TAZ0 1938 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 MC5RP33032 325 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 C17orf58Q2M2W7 97 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 GTF2H5Q6ZYL4 71 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 C18orf32Q8TCD1 76 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 GPR82Q96P67 336 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 TMEM14BQ9NUH8 114 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 AHCTF1Q8WYP5 2266 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 RNASE2P10153 161 aaKnown RBP9.26□□□□□ -0.93
SMAD9-202ENST00000379826 COL8A2P25067 703 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 IGHV3OR16-8A0A075B7F1 116 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 IGHV3-35A0A0C4DH35 117 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 LIPFP07098 398 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 RBPMS2Q6ZRY4 209 aaKnown RBP9.26□□□□□ -0.93
SMAD9-202ENST00000379826 EXOC3-AS1Q8N2X6 119 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 CNOT1A5YKK6 2376 aaKnown RBP9.26□□□□□ -0.93
SMAD9-202ENST00000379826 DOCK7Q96N67 2140 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 LINC00614P0C842 121 aa9.26□□□□□ -0.93
SMAD9-202ENST00000379826 C10orf142B7Z368 130 aa9.25□□□□□ -0.93
SMAD9-202ENST00000379826 CKS2P33552 79 aa9.25□□□□□ -0.93
SMAD9-202ENST00000379826 BSPH1Q075Z2 132 aa9.25□□□□□ -0.93
SMAD9-202ENST00000379826 C18orf15Q96N68 181 aa9.25□□□□□ -0.93
SMAD9-202ENST00000379826 IGHV3OR16-10A0A075B7F0 116 aa9.25□□□□□ -0.93
SMAD9-202ENST00000379826 MMP23AO75900 390 aa9.25□□□□□ -0.93
SMAD9-202ENST00000379826 IL4P05112 153 aa9.25□□□□□ -0.93
SMAD9-202ENST00000379826 MPV17L2Q567V2 206 aa9.25□□□□□ -0.93
SMAD9-202ENST00000379826 STPG4Q8N801 248 aa9.25□□□□□ -0.93
SMAD9-202ENST00000379826 DCAF16Q9NXF7 216 aa9.25□□□□□ -0.93
SMAD9-202ENST00000379826 SLC25A15Q9Y619 301 aa9.25□□□□□ -0.93
SMAD9-202ENST00000379826 TRAV8-1A0A0A6YYK1 113 aa9.25□□□□□ -0.93
SMAD9-202ENST00000379826 BRWD1-AS2P59051 145 aa9.25□□□□□ -0.93
SMAD9-202ENST00000379826 OR10AG1Q8NH19 301 aa9.25□□□□□ -0.93
SMAD9-202ENST00000379826 NEUROG1Q92886 237 aa9.25□□□□□ -0.93
SMAD9-202ENST00000379826 Q96MF0 132 aa9.25□□□□□ -0.93
SMAD9-202ENST00000379826 PRO3102Q9H379 93 aa9.25□□□□□ -0.93
SMAD9-202ENST00000379826 PLSCR4Q9NRQ2 329 aa9.25□□□□□ -0.93
SMAD9-202ENST00000379826 H0YJW9 148 aa9.24□□□□□ -0.93
SMAD9-202ENST00000379826 TMEM200BQ69YZ2 307 aa9.24□□□□□ -0.93
SMAD9-202ENST00000379826 Q8TCH9 128 aa9.24□□□□□ -0.93
SMAD9-202ENST00000379826 ZNF257Q9Y2Q1 563 aa9.24□□□□□ -0.93
SMAD9-202ENST00000379826 SMIM27A0A1W2PRY6 76 aa9.24□□□□□ -0.93
SMAD9-202ENST00000379826 NAA38Q9BRA0 125 aaKnown RBP9.24□□□□□ -0.93
SMAD9-202ENST00000379826 COL5A1P20908 1838 aaPredicted RBP9.24□□□□□ -0.93
SMAD9-202ENST00000379826 LOXL3P58215 753 aa9.24□□□□□ -0.93
SMAD9-202ENST00000379826 TEX45Q8NA69 505 aa9.24□□□□□ -0.93
SMAD9-202ENST00000379826 TMEM116Q8NCL8 245 aa9.24□□□□□ -0.93
SMAD9-202ENST00000379826 AP5S1Q9NUS5 200 aa9.24□□□□□ -0.93
SMAD9-202ENST00000379826 RPUSD1Q9UJJ7 312 aaKnown RBP9.24□□□□□ -0.93
SMAD9-202ENST00000379826 A0A087X0K7 114 aa9.24□□□□□ -0.93
SMAD9-202ENST00000379826 SRRM4A7MD48 611 aaKnown RBP9.24□□□□□ -0.93
SMAD9-202ENST00000379826 IGLC2P0DOY2 106 aa9.24□□□□□ -0.93
SMAD9-202ENST00000379826 IGLC3P0DOY3 106 aa9.24□□□□□ -0.93
SMAD9-202ENST00000379826 AMMECR1LQ6DCA0 310 aa9.24□□□□□ -0.93
SMAD9-202ENST00000379826 FNDC4Q9H6D8 234 aaPredicted RBP9.24□□□□□ -0.93
SMAD9-202ENST00000379826 WNT2P09544 360 aa9.23□□□□□ -0.93
SMAD9-202ENST00000379826 PNKDQ8N490 385 aa9.23□□□□□ -0.93
SMAD9-202ENST00000379826 ATP5IP56385 69 aaPredicted RBP9.23□□□□□ -0.93
SMAD9-202ENST00000379826 RPRMLQ8N4K4 120 aa9.23□□□□□ -0.93
SMAD9-202ENST00000379826 THYN1Q9P016 225 aa9.23□□□□□ -0.93
SMAD9-202ENST00000379826 UTF1Q5T230 341 aa9.23□□□□□ -0.93
SMAD9-202ENST00000379826 C7orf69Q9H7B7 122 aa9.23□□□□□ -0.93
SMAD9-202ENST00000379826 TDGF1P13385 188 aa9.23□□□□□ -0.93
SMAD9-202ENST00000379826 DIAPH2-AS1Q14236 149 aa9.23□□□□□ -0.93
SMAD9-202ENST00000379826 LDLRAD2Q5SZI1 272 aa9.23□□□□□ -0.93
SMAD9-202ENST00000379826 GCSHP23434 173 aa9.23□□□□□ -0.93
SMAD9-202ENST00000379826 GPR183P32249 361 aa9.23□□□□□ -0.93
SMAD9-202ENST00000379826 DLX1P56177 255 aa9.23□□□□□ -0.93
SMAD9-202ENST00000379826 PIP4P1Q86T03 277 aa9.23□□□□□ -0.93
SMAD9-202ENST00000379826 OR4A5Q8NH83 315 aa9.23□□□□□ -0.93
SMAD9-202ENST00000379826 CACNA1EQ15878 2313 aa9.23□□□□□ -0.93
SMAD9-202ENST00000379826 SVILO95425 2214 aa9.22□□□□□ -0.93
SMAD9-202ENST00000379826 IGHV3-66A0A0C4DH42 116 aa9.22□□□□□ -0.93
SMAD9-202ENST00000379826 A0A1B0GUT8 65 aa9.22□□□□□ -0.93
SMAD9-202ENST00000379826 B9A039 149 aa9.22□□□□□ -0.93
SMAD9-202ENST00000379826 LYNX1G3V0Z9 82 aa9.22□□□□□ -0.93
SMAD9-202ENST00000379826 LYNX1P0DP58 116 aa9.22□□□□□ -0.93
SMAD9-202ENST00000379826 ECSCRQ19T08 205 aa9.22□□□□□ -0.93
SMAD9-202ENST00000379826 MORN5Q5VZ52 161 aa9.22□□□□□ -0.93
SMAD9-202ENST00000379826 C7orf71A4D174 169 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms