RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 OR4D5Q8NGN0 318 aa11.32□□□□□ -0.6
RAB4B-202ENST00000378307 COQ8AQ8NI60 647 aa11.32□□□□□ -0.6
RAB4B-202ENST00000378307 TMEM231Q9H6L2 316 aa11.32□□□□□ -0.6
RAB4B-202ENST00000378307 RYR2Q92736 4967 aa11.32□□□□□ -0.6
RAB4B-202ENST00000378307 TRAV2A0A0B4J234 112 aa11.31□□□□□ -0.6
RAB4B-202ENST00000378307 KIR2DL5BA0A0G2JN68 375 aa11.31□□□□□ -0.6
RAB4B-202ENST00000378307 KIR2DL5BA0A0G2JPC4 375 aa11.31□□□□□ -0.6
RAB4B-202ENST00000378307 H3BP45 60 aa11.31□□□□□ -0.6
RAB4B-202ENST00000378307 SPRY2O43597 315 aa11.31□□□□□ -0.6
RAB4B-202ENST00000378307 BUB3O43684 328 aa11.31□□□□□ -0.6
RAB4B-202ENST00000378307 MED6O75586 246 aa11.31□□□□□ -0.6
RAB4B-202ENST00000378307 RAB11AP62491 216 aa11.31□□□□□ -0.6
RAB4B-202ENST00000378307 EWSR1Q01844 656 aaKnown RBP eCLIP11.31□□□□□ -0.6
RAB4B-202ENST00000378307 SPANXN5Q5MJ07 72 aa11.31□□□□□ -0.6
RAB4B-202ENST00000378307 GSG1LQ6UXU4 331 aa11.31□□□□□ -0.6
RAB4B-202ENST00000378307 Q6ZWC4 215 aa11.31□□□□□ -0.6
RAB4B-202ENST00000378307 KIR2DL5AQ8N109 375 aa11.31□□□□□ -0.6
RAB4B-202ENST00000378307 KIR2DL5BQ8NHK3 375 aa11.31□□□□□ -0.6
RAB4B-202ENST00000378307 RNF125Q96EQ8 232 aa11.31□□□□□ -0.6
RAB4B-202ENST00000378307 SLC35E1Q96K37 410 aa11.31□□□□□ -0.6
RAB4B-202ENST00000378307 C20orf85Q9H1P6 137 aa11.31□□□□□ -0.6
RAB4B-202ENST00000378307 TRAV6A0A075B6T7 132 aa11.3□□□□□ -0.6
RAB4B-202ENST00000378307 ZFP92A6NM28 416 aa11.3□□□□□ -0.6
RAB4B-202ENST00000378307 TCRBP04435 133 aa11.3□□□□□ -0.6
RAB4B-202ENST00000378307 PAX9P55771 341 aa11.3□□□□□ -0.6
RAB4B-202ENST00000378307 CMC4P56277 68 aaPredicted RBP11.3□□□□□ -0.6
RAB4B-202ENST00000378307 OR2F1Q13607 317 aa11.3□□□□□ -0.6
RAB4B-202ENST00000378307 TMEM182Q6ZP80 229 aaPredicted RBP11.3□□□□□ -0.6
RAB4B-202ENST00000378307 MITD1Q8WV92 249 aa11.3□□□□□ -0.6
RAB4B-202ENST00000378307 RNF183Q96D59 192 aa11.3□□□□□ -0.6
RAB4B-202ENST00000378307 CIB3Q96Q77 187 aaPredicted RBP11.3□□□□□ -0.6
RAB4B-202ENST00000378307 HYDINQ4G0P3 5121 aa11.29□□□□□ -0.6
RAB4B-202ENST00000378307 PMS2P5A8MQ11 134 aa11.29□□□□□ -0.6
RAB4B-202ENST00000378307 UBE2CO00762 179 aa11.29□□□□□ -0.6
RAB4B-202ENST00000378307 CCNKO75909 580 aa11.29□□□□□ -0.6
RAB4B-202ENST00000378307 ZNF688P0C7X2 276 aa11.29□□□□□ -0.6
RAB4B-202ENST00000378307 NKX2-1P43699 371 aaPredicted RBP11.29□□□□□ -0.6
RAB4B-202ENST00000378307 THAP8Q8NA92 274 aa11.29□□□□□ -0.6
RAB4B-202ENST00000378307 GRAMD2BQ96HH9 432 aa11.29□□□□□ -0.6
RAB4B-202ENST00000378307 NARS2Q96I59 477 aaKnown RBP11.29□□□□□ -0.6
RAB4B-202ENST00000378307 SEC22CQ9BRL7 303 aa11.29□□□□□ -0.6
RAB4B-202ENST00000378307 CCDC32Q9BV29 185 aa11.29□□□□□ -0.6
RAB4B-202ENST00000378307 PBDC1Q9BVG4 233 aa11.29□□□□□ -0.6
RAB4B-202ENST00000378307 CSTL1Q9H114 145 aa11.29□□□□□ -0.6
RAB4B-202ENST00000378307 TBC1D24Q9ULP9 559 aa11.29□□□□□ -0.6
RAB4B-202ENST00000378307 TP53TG1Q9Y2A0 90 aa11.29□□□□□ -0.6
RAB4B-202ENST00000378307 A0A0J9YWU9 116 aa11.28□□□□□ -0.6
RAB4B-202ENST00000378307 CCSO14618 274 aa11.28□□□□□ -0.6
RAB4B-202ENST00000378307 SSSCA1O60232 199 aa11.28□□□□□ -0.6
RAB4B-202ENST00000378307 IFNA21P01568 189 aa11.28□□□□□ -0.6
RAB4B-202ENST00000378307 TRGV9Q99603 122 aa11.28□□□□□ -0.6
RAB4B-202ENST00000378307 PSENENQ9NZ42 101 aa11.28□□□□□ -0.6
RAB4B-202ENST00000378307 STRAPQ9Y3F4 350 aaKnown RBP11.28□□□□□ -0.6
RAB4B-202ENST00000378307 HELTA6NFD8 242 aa11.27□□□□□ -0.61
RAB4B-202ENST00000378307 KNCNA6PVL3 124 aa11.27□□□□□ -0.61
RAB4B-202ENST00000378307 GIG44P09565 113 aaPredicted RBP11.27□□□□□ -0.61
RAB4B-202ENST00000378307 GATA2P23769 480 aaPredicted RBP11.27□□□□□ -0.61
RAB4B-202ENST00000378307 EIF2B2P49770 351 aaKnown RBP11.27□□□□□ -0.61
RAB4B-202ENST00000378307 LYZP61626 148 aa11.27□□□□□ -0.61
RAB4B-202ENST00000378307 RPP30P78346 268 aaKnown RBP11.27□□□□□ -0.61
RAB4B-202ENST00000378307 IAH1Q2TAA2 248 aaPredicted RBP11.27□□□□□ -0.61
RAB4B-202ENST00000378307 SIGLEC15Q6ZMC9 328 aa11.27□□□□□ -0.61
RAB4B-202ENST00000378307 LINC00299Q6ZSB3 139 aa11.27□□□□□ -0.61
RAB4B-202ENST00000378307 ZBTB8BQ8NAP8 495 aaPredicted RBP11.27□□□□□ -0.61
RAB4B-202ENST00000378307 NUDT15Q9NV35 164 aa11.27□□□□□ -0.61
RAB4B-202ENST00000378307 IFITM3Q01628 133 aa11.26□□□□□ -0.61
RAB4B-202ENST00000378307 ACOT7LQ6ZUV0 252 aa11.26□□□□□ -0.61
RAB4B-202ENST00000378307 SMIM8Q96KF7 97 aa11.26□□□□□ -0.61
RAB4B-202ENST00000378307 GSKIPQ9P0R6 139 aa11.26□□□□□ -0.61
RAB4B-202ENST00000378307 RCL1Q9Y2P8 373 aaKnown RBP11.26□□□□□ -0.61
RAB4B-202ENST00000378307 ALMS1Q8TCU4 4167 aa11.25□□□□□ -0.61
RAB4B-202ENST00000378307 SNRPGP15A8MWD9 76 aa11.25□□□□□ -0.61
RAB4B-202ENST00000378307 SCGB1D2O95969 90 aa11.25□□□□□ -0.61
RAB4B-202ENST00000378307 MBPP02686 304 aaPredicted RBP11.25□□□□□ -0.61
RAB4B-202ENST00000378307 AP2S1P53680 142 aaPredicted RBP11.25□□□□□ -0.61
RAB4B-202ENST00000378307 OR8G2PQ6IF36 304 aa11.25□□□□□ -0.61
RAB4B-202ENST00000378307 TMEM14EPQ6UXP3 125 aa11.25□□□□□ -0.61
RAB4B-202ENST00000378307 TRPT1Q86TN4 253 aaKnown RBP11.25□□□□□ -0.61
RAB4B-202ENST00000378307 IL17DQ8TAD2 202 aa11.25□□□□□ -0.61
RAB4B-202ENST00000378307 CA1P00915 261 aaPredicted RBP11.24□□□□□ -0.61
RAB4B-202ENST00000378307 H2AFB2P0C5Z0 115 aa11.24□□□□□ -0.61
RAB4B-202ENST00000378307 METTL15P1P0C7V9 234 aa11.24□□□□□ -0.61
RAB4B-202ENST00000378307 DEFB1P60022 68 aa11.24□□□□□ -0.61
RAB4B-202ENST00000378307 ARL16Q0P5N6 197 aa11.24□□□□□ -0.61
RAB4B-202ENST00000378307 PSMG4Q5JS54 123 aa11.24□□□□□ -0.61
RAB4B-202ENST00000378307 STHQ8IWL8 128 aa11.24□□□□□ -0.61
RAB4B-202ENST00000378307 ZNF431Q8TF32 576 aaPredicted RBP11.24□□□□□ -0.61
RAB4B-202ENST00000378307 S100ZQ8WXG8 99 aa11.24□□□□□ -0.61
RAB4B-202ENST00000378307 C17orf77Q96MU5 243 aa11.24□□□□□ -0.61
RAB4B-202ENST00000378307 WDR12Q9GZL7 423 aaKnown RBP11.24□□□□□ -0.61
RAB4B-202ENST00000378307 NRN1Q9NPD7 142 aa11.24□□□□□ -0.61
RAB4B-202ENST00000378307 FAM240BA0A1B0GVZ2 78 aa11.23□□□□□ -0.61
RAB4B-202ENST00000378307 C7orf66A4D0T2 115 aa11.23□□□□□ -0.61
RAB4B-202ENST00000378307 C4BPBP20851 252 aa11.23□□□□□ -0.61
RAB4B-202ENST00000378307 RRAS2P62070 204 aaPredicted RBP11.23□□□□□ -0.61
RAB4B-202ENST00000378307 AKR1C1Q04828 323 aa11.23□□□□□ -0.61
RAB4B-202ENST00000378307 ASAH1Q13510 395 aa11.23□□□□□ -0.61
RAB4B-202ENST00000378307 ACTL10Q5JWF8 245 aa11.23□□□□□ -0.61
RAB4B-202ENST00000378307 TMEM144Q7Z5S9 345 aa11.23□□□□□ -0.61
RAB4B-202ENST00000378307 RAB40CQ96S21 281 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms