RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 SGK494Q96LW2 274 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 SSUH2Q9Y2M2 353 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 IGHV3-21A0A0B4J1V1 117 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 TEX45Q8NA69 505 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 TMEM116Q8NCL8 245 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 OR1B1Q8NGR6 318 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 WIPF2Q8TF74 440 aaPredicted RBP8.74□□□□□ -1.01
BEST1-201ENST00000378043 KCNS1Q96KK3 526 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 NRN1Q9NPD7 142 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 PAM16Q9Y3D7 125 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 ARHGAP32A7KAX9 2087 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 IGHV2-26A0A0B4J1V2 119 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 LYNX1G3V0Z9 82 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 CORTO00230 105 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 APCSP02743 223 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 LYNX1P0DP58 116 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 AMTP48728 403 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 TNXAQ16473 311 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 TBR1Q16650 682 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 TMEM183BQ1AE95 376 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 BLNKQ8WV28 456 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 TRGV9Q99603 122 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 GSX1Q9H4S2 264 aaPredicted RBP8.74□□□□□ -1.01
BEST1-201ENST00000378043 EPDR1Q9UM22 224 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 SIGLEC9Q9Y336 463 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 KLF12Q9Y4X4 402 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 PTPRQQ9UMZ3 2332 aa8.73□□□□□ -1.01
BEST1-201ENST00000378043 VSTM5A8MXK1 200 aa8.73□□□□□ -1.01
BEST1-201ENST00000378043 M0R143 59 aa8.73□□□□□ -1.01
BEST1-201ENST00000378043 RPL27AP46776 148 aaKnown RBP8.73□□□□□ -1.01
BEST1-201ENST00000378043 PRR27Q6MZM9 219 aa8.73□□□□□ -1.01
BEST1-201ENST00000378043 SPACA3Q8IXA5 215 aa8.73□□□□□ -1.01
BEST1-201ENST00000378043 PGPA6NDG6 321 aa8.73□□□□□ -1.01
BEST1-201ENST00000378043 ZNF324O75467 553 aaPredicted RBP8.73□□□□□ -1.01
BEST1-201ENST00000378043 FAM87AP0C7U9 286 aa8.73□□□□□ -1.01
BEST1-201ENST00000378043 KRTDAPP60985 99 aa8.73□□□□□ -1.01
BEST1-201ENST00000378043 LEMD1Q68G75 181 aa8.73□□□□□ -1.01
BEST1-201ENST00000378043 LINC00322Q6ZN03 302 aaPredicted RBP8.73□□□□□ -1.01
BEST1-201ENST00000378043 SSX8Q7RTT4 187 aa8.73□□□□□ -1.01
BEST1-201ENST00000378043 NIT1Q86X76 327 aa8.73□□□□□ -1.01
BEST1-201ENST00000378043 FAM19A2Q8N3H0 131 aa8.73□□□□□ -1.01
BEST1-201ENST00000378043 C18orf32Q8TCD1 76 aa8.73□□□□□ -1.01
BEST1-201ENST00000378043 PERPQ96FX8 193 aa8.73□□□□□ -1.01
BEST1-201ENST00000378043 GRAMD2BQ96HH9 432 aa8.73□□□□□ -1.01
BEST1-201ENST00000378043 NEU1Q99519 415 aa8.73□□□□□ -1.01
BEST1-201ENST00000378043 MLST8Q9BVC4 326 aa8.73□□□□□ -1.01
BEST1-201ENST00000378043 ZNF331Q9NQX6 463 aaPredicted RBP8.73□□□□□ -1.01
BEST1-201ENST00000378043 ANKHD1Q8IWZ3 2542 aaKnown RBP8.72□□□□□ -1.01
BEST1-201ENST00000378043 IGHV1-3A0A0C4DH29 117 aa8.72□□□□□ -1.01
BEST1-201ENST00000378043 TEX22C9J3V5 150 aa8.72□□□□□ -1.01
BEST1-201ENST00000378043 NBEAP1P0C6P0 100 aa8.72□□□□□ -1.01
BEST1-201ENST00000378043 GP9P14770 177 aa8.72□□□□□ -1.01
BEST1-201ENST00000378043 PMCHP20382 165 aa8.72□□□□□ -1.01
BEST1-201ENST00000378043 ETFRF1Q6IPR1 90 aa8.72□□□□□ -1.01
BEST1-201ENST00000378043 TSKUQ8WUA8 353 aa8.72□□□□□ -1.01
BEST1-201ENST00000378043 MIEN1Q9BRT3 115 aa8.72□□□□□ -1.01
BEST1-201ENST00000378043 RALYQ9UKM9 306 aaKnown RBP8.72□□□□□ -1.01
BEST1-201ENST00000378043 HIGD1CA8MV81 97 aa8.72□□□□□ -1.01
BEST1-201ENST00000378043 BUB1B-PAK6H3BSN5 160 aa8.72□□□□□ -1.01
BEST1-201ENST00000378043 H3BTX0 84 aa8.72□□□□□ -1.01
BEST1-201ENST00000378043 SLC25A5P05141 298 aaKnown RBP8.72□□□□□ -1.01
BEST1-201ENST00000378043 APOBEC3AP31941 199 aaPredicted RBP8.72□□□□□ -1.01
BEST1-201ENST00000378043 RASL11AQ6T310 242 aa8.72□□□□□ -1.01
BEST1-201ENST00000378043 ZNF705AQ6ZN79 300 aaPredicted RBP8.72□□□□□ -1.01
BEST1-201ENST00000378043 STXBP6Q8NFX7 210 aa8.72□□□□□ -1.01
BEST1-201ENST00000378043 TNFRSF14Q92956 283 aa8.72□□□□□ -1.01
BEST1-201ENST00000378043 TMEM68Q96MH6 324 aa8.72□□□□□ -1.01
BEST1-201ENST00000378043 VAMP8Q9BV40 100 aa8.72□□□□□ -1.01
BEST1-201ENST00000378043 ZNF586Q9NXT0 402 aa8.72□□□□□ -1.01
BEST1-201ENST00000378043 COL12A1Q99715 3063 aa8.72□□□□□ -1.01
BEST1-201ENST00000378043 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.71□□□□□ -1.01
BEST1-201ENST00000378043 CASP6P55212 293 aa8.71□□□□□ -1.01
BEST1-201ENST00000378043 PPP1R27Q86WC6 154 aa8.71□□□□□ -1.01
BEST1-201ENST00000378043 NGBQ9NPG2 151 aa8.71□□□□□ -1.01
BEST1-201ENST00000378043 INSIG2Q9Y5U4 225 aa8.71□□□□□ -1.01
BEST1-201ENST00000378043 DIRC3C9JPN6 131 aa8.71□□□□□ -1.02
BEST1-201ENST00000378043 TCAPO15273 167 aa8.71□□□□□ -1.02
BEST1-201ENST00000378043 HYPMO75409 117 aa8.71□□□□□ -1.02
BEST1-201ENST00000378043 PLP1P60201 277 aa8.71□□□□□ -1.02
BEST1-201ENST00000378043 GPR82Q96P67 336 aa8.71□□□□□ -1.02
BEST1-201ENST00000378043 SSBP4Q9BWG4 385 aaPredicted RBP8.71□□□□□ -1.02
BEST1-201ENST00000378043 F11RQ9Y624 299 aaKnown RBP8.71□□□□□ -1.02
BEST1-201ENST00000378043 C3orf79P0CE67 100 aa8.7□□□□□ -1.02
BEST1-201ENST00000378043 CTRLP40313 264 aa8.7□□□□□ -1.02
BEST1-201ENST00000378043 UBE2G1P62253 170 aa8.7□□□□□ -1.02
BEST1-201ENST00000378043 PAX2Q02962 417 aa8.7□□□□□ -1.02
BEST1-201ENST00000378043 PRR31Q5SQ13 230 aa8.7□□□□□ -1.02
BEST1-201ENST00000378043 LDLRAD2Q5SZI1 272 aa8.7□□□□□ -1.02
BEST1-201ENST00000378043 PRSS22Q9GZN4 317 aa8.7□□□□□ -1.02
BEST1-201ENST00000378043 FBXL15Q9H469 300 aa8.7□□□□□ -1.02
BEST1-201ENST00000378043 RPH3ALQ9UNE2 315 aa8.7□□□□□ -1.02
BEST1-201ENST00000378043 HRNRQ86YZ3 2850 aaPredicted RBP8.7□□□□□ -1.02
BEST1-201ENST00000378043 A0A1B0GXF2 115 aa8.7□□□□□ -1.02
BEST1-201ENST00000378043 B9A039 149 aa8.7□□□□□ -1.02
BEST1-201ENST00000378043 HIST1H1EP10412 219 aaKnown RBP8.7□□□□□ -1.02
BEST1-201ENST00000378043 GPR6P46095 362 aaPredicted RBP8.7□□□□□ -1.02
BEST1-201ENST00000378043 C8orf46Q8TAG6 207 aa8.7□□□□□ -1.02
BEST1-201ENST00000378043 CLEC7AQ9BXN2 247 aa8.7□□□□□ -1.02
BEST1-201ENST00000378043 MRPL27Q9P0M9 148 aaKnown RBP8.7□□□□□ -1.02
BEST1-201ENST00000378043 SIAH2O43255 324 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms