RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 NUDT10Q8NFP7 164 aa13.04□□□□□ -0.32
TRIM27-202ENST00000377199 NUDT11Q96G61 164 aa13.04□□□□□ -0.32
TRIM27-202ENST00000377199 S4R3C0 116 aa13.04□□□□□ -0.32
TRIM27-202ENST00000377199 VAMP8Q9BV40 100 aa13.03□□□□□ -0.32
TRIM27-202ENST00000377199 ZNF835Q9Y2P0 537 aa13.03□□□□□ -0.32
TRIM27-202ENST00000377199 WNK2Q9Y3S1 2297 aa13.03□□□□□ -0.32
TRIM27-202ENST00000377199 TRAV9-1A0A075B6T8 112 aa13.03□□□□□ -0.32
TRIM27-202ENST00000377199 IGLC7A0M8Q6 106 aa13.03□□□□□ -0.32
TRIM27-202ENST00000377199 LYZP61626 148 aa13.03□□□□□ -0.32
TRIM27-202ENST00000377199 WDR73Q6P4I2 378 aa13.03□□□□□ -0.32
TRIM27-202ENST00000377199 ARL2-SNX15V9GYD0 113 aa13.03□□□□□ -0.32
TRIM27-202ENST00000377199 SPTBN1Q01082 2364 aaKnown RBP13.03□□□□□ -0.32
TRIM27-202ENST00000377199 IGHV2-26A0A0B4J1V2 119 aa13.02□□□□□ -0.32
TRIM27-202ENST00000377199 ATP5IP56385 69 aaPredicted RBP13.02□□□□□ -0.32
TRIM27-202ENST00000377199 TCF24Q7RTU0 167 aa13.02□□□□□ -0.32
TRIM27-202ENST00000377199 C11orf42Q8N5U0 333 aa13.02□□□□□ -0.32
TRIM27-202ENST00000377199 C2orf88Q9BSF0 95 aa13.02□□□□□ -0.32
TRIM27-202ENST00000377199 WNT10AQ9GZT5 417 aa13.02□□□□□ -0.32
TRIM27-202ENST00000377199 CACNA1BQ00975 2339 aa13.02□□□□□ -0.32
TRIM27-202ENST00000377199 ZNF841Q6ZN19 808 aa13.02□□□□□ -0.33
TRIM27-202ENST00000377199 OR2D3Q8NGH3 330 aa13.02□□□□□ -0.33
TRIM27-202ENST00000377199 NRN1Q9NPD7 142 aa13.02□□□□□ -0.33
TRIM27-202ENST00000377199 TRAV8-1A0A0A6YYK1 113 aa13.02□□□□□ -0.33
TRIM27-202ENST00000377199 SMIM27A0A1W2PRY6 76 aa13.02□□□□□ -0.33
TRIM27-202ENST00000377199 A0A1W2PS18 150 aa13.02□□□□□ -0.33
TRIM27-202ENST00000377199 HIGD1CA8MV81 97 aa13.02□□□□□ -0.33
TRIM27-202ENST00000377199 GPX1P07203 203 aa13.02□□□□□ -0.33
TRIM27-202ENST00000377199 DLX6P56179 175 aa13.02□□□□□ -0.33
TRIM27-202ENST00000377199 PNKDQ8N490 385 aa13.02□□□□□ -0.33
TRIM27-202ENST00000377199 NUP35Q8NFH5 326 aa13.02□□□□□ -0.33
TRIM27-202ENST00000377199 C22orf15Q8WYQ4 148 aa13.02□□□□□ -0.33
TRIM27-202ENST00000377199 ZNF586Q9NXT0 402 aa13.02□□□□□ -0.33
TRIM27-202ENST00000377199 ONECUT1Q9UBC0 465 aa13.02□□□□□ -0.33
TRIM27-202ENST00000377199 DIRC3C9JPN6 131 aa13.01□□□□□ -0.33
TRIM27-202ENST00000377199 RBP4P02753 201 aa13.01□□□□□ -0.33
TRIM27-202ENST00000377199 MC5RP33032 325 aa13.01□□□□□ -0.33
TRIM27-202ENST00000377199 MRGPRG-AS1Q2M3A8 158 aa13.01□□□□□ -0.33
TRIM27-202ENST00000377199 ASCL5Q7RTU5 278 aa13.01□□□□□ -0.33
TRIM27-202ENST00000377199 BEND2Q8NDZ0 799 aa13.01□□□□□ -0.33
TRIM27-202ENST00000377199 NBEAP1P0C6P0 100 aa13.01□□□□□ -0.33
TRIM27-202ENST00000377199 RNF2Q99496 336 aa13.01□□□□□ -0.33
TRIM27-202ENST00000377199 NEU1Q99519 415 aa13.01□□□□□ -0.33
TRIM27-202ENST00000377199 IZUMO1RA6ND01 250 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 TCAPO15273 167 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 MT-ND6P03923 174 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 SSTP61278 116 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 Q0VG73 95 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 TBR1Q16650 682 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 SPACA3Q8IXA5 215 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 OR4A5Q8NH83 315 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 RPEQ96AT9 228 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 PERPQ96FX8 193 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 NGBQ9NPG2 151 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 HILPDAQ9Y5L2 63 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 COL12A1Q99715 3063 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 TRBV9A0A0B4J1U6 114 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 KIR2DL5BA0A0G2JN68 375 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 KIR2DL5BA0A0G2JPC4 375 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 M0R143 59 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 CNIH1O95406 144 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 HLA-DQA1P01909 254 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 CD3EP07766 207 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 TMEM183BQ1AE95 376 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 GDF5OSQ5U4N7 250 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 Q71RC1 249 aaPredicted RBP13□□□□□ -0.33
TRIM27-202ENST00000377199 KIR2DL5AQ8N109 375 aa13□□□□□ -0.33
TRIM27-202ENST00000377199 IGHV1-3A0A0C4DH29 117 aa12.99□□□□□ -0.33
TRIM27-202ENST00000377199 A6NNC1 897 aa12.99□□□□□ -0.33
TRIM27-202ENST00000377199 KCNS1Q96KK3 526 aa12.99□□□□□ -0.33
TRIM27-202ENST00000377199 EPDR1Q9UM22 224 aa12.99□□□□□ -0.33
TRIM27-202ENST00000377199 SIGLEC9Q9Y336 463 aa12.99□□□□□ -0.33
TRIM27-202ENST00000377199 TNFRSF13BO14836 293 aaPredicted RBP12.99□□□□□ -0.33
TRIM27-202ENST00000377199 HYPMO75409 117 aa12.99□□□□□ -0.33
TRIM27-202ENST00000377199 LGALS7P47929 136 aa12.99□□□□□ -0.33
TRIM27-202ENST00000377199 ZNF137PP52743 207 aa12.99□□□□□ -0.33
TRIM27-202ENST00000377199 FOXA3P55318 350 aaPredicted RBP12.99□□□□□ -0.33
TRIM27-202ENST00000377199 LINC00322Q6ZN03 302 aaPredicted RBP12.99□□□□□ -0.33
TRIM27-202ENST00000377199 PPP1R27Q86WC6 154 aa12.99□□□□□ -0.33
TRIM27-202ENST00000377199 PPIAL4CA0A0B4J2A2 164 aa12.99□□□□□ -0.33
TRIM27-202ENST00000377199 M0QZ24 198 aa12.99□□□□□ -0.33
TRIM27-202ENST00000377199 PPIAL4GP0DN37 164 aa12.99□□□□□ -0.33
TRIM27-202ENST00000377199 APOBEC3AP31941 199 aaPredicted RBP12.99□□□□□ -0.33
TRIM27-202ENST00000377199 LCN12Q6JVE5 192 aa12.99□□□□□ -0.33
TRIM27-202ENST00000377199 RNASEKQ6P5S7 137 aaKnown RBP12.99□□□□□ -0.33
TRIM27-202ENST00000377199 LINC00311Q8N616 119 aa12.99□□□□□ -0.33
TRIM27-202ENST00000377199 FSTL3O95633 263 aa12.98□□□□□ -0.33
TRIM27-202ENST00000377199 EXOC3-AS1Q8N2X6 119 aa12.98□□□□□ -0.33
TRIM27-202ENST00000377199 MUC15Q8N387 334 aa12.98□□□□□ -0.33
TRIM27-202ENST00000377199 KLF17Q5JT82 389 aaPredicted RBP12.98□□□□□ -0.33
TRIM27-202ENST00000377199 THAP8Q8NA92 274 aa12.98□□□□□ -0.33
TRIM27-202ENST00000377199 JKAMPQ9P055 326 aa12.98□□□□□ -0.33
TRIM27-202ENST00000377199 TIMM8BQ9Y5J9 83 aaPredicted RBP12.98□□□□□ -0.33
TRIM27-202ENST00000377199 VWC2LB2RUY7 222 aa12.97□□□□□ -0.33
TRIM27-202ENST00000377199 ZNF324O75467 553 aaPredicted RBP12.97□□□□□ -0.33
TRIM27-202ENST00000377199 PSG1P11464 419 aa12.97□□□□□ -0.33
TRIM27-202ENST00000377199 COMPP49747 757 aaPredicted RBP12.97□□□□□ -0.33
TRIM27-202ENST00000377199 NUTF2P61970 127 aaKnown RBP12.97□□□□□ -0.33
TRIM27-202ENST00000377199 ARF6P62330 175 aa12.97□□□□□ -0.33
TRIM27-202ENST00000377199 PMCHL1Q16048 86 aa12.97□□□□□ -0.33
TRIM27-202ENST00000377199 TSKUQ8WUA8 353 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms