RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 ECSCRQ19T08 205 aa10.19□□□□□ -0.78
TRIM40-206ENST00000376724 Q5PR19 223 aa10.19□□□□□ -0.78
TRIM40-206ENST00000376724 DNLZQ5SXM8 178 aa10.19□□□□□ -0.78
TRIM40-206ENST00000376724 TTC9CQ8N5M4 171 aa10.19□□□□□ -0.78
TRIM40-206ENST00000376724 OR51G1Q8NGK1 321 aa10.19□□□□□ -0.78
TRIM40-206ENST00000376724 OR1L4Q8NGR5 311 aa10.19□□□□□ -0.78
TRIM40-206ENST00000376724 ISOC2Q96AB3 205 aa10.19□□□□□ -0.78
TRIM40-206ENST00000376724 FANCD2OSQ96PS1 177 aa10.19□□□□□ -0.78
TRIM40-206ENST00000376724 SMIM7Q9BQ49 75 aa10.19□□□□□ -0.78
TRIM40-206ENST00000376724 TMUB1Q9BVT8 246 aa10.19□□□□□ -0.78
TRIM40-206ENST00000376724 YTHDF2Q9Y5A9 579 aaKnown RBP10.19□□□□□ -0.78
TRIM40-206ENST00000376724 PTPN13Q12923 2485 aa10.18□□□□□ -0.78
TRIM40-206ENST00000376724 LINC01548A6NM66 108 aa10.18□□□□□ -0.78
TRIM40-206ENST00000376724 ATP6V0E1O15342 81 aa10.18□□□□□ -0.78
TRIM40-206ENST00000376724 C8orf88P0DMB2 117 aa10.18□□□□□ -0.78
TRIM40-206ENST00000376724 S100A2P29034 98 aa10.18□□□□□ -0.78
TRIM40-206ENST00000376724 RHEBQ15382 184 aa10.18□□□□□ -0.78
TRIM40-206ENST00000376724 LY6EQ16553 131 aa10.18□□□□□ -0.78
TRIM40-206ENST00000376724 TIGITQ495A1 244 aa10.18□□□□□ -0.78
TRIM40-206ENST00000376724 PIFOQ8TCI5 191 aa10.18□□□□□ -0.78
TRIM40-206ENST00000376724 ZNF503Q96F45 646 aa10.18□□□□□ -0.78
TRIM40-206ENST00000376724 MEGF9Q9H1U4 602 aa10.18□□□□□ -0.78
TRIM40-206ENST00000376724 PARLQ9H300 379 aa10.18□□□□□ -0.78
TRIM40-206ENST00000376724 TENM4Q6N022 2769 aa10.18□□□□□ -0.78
TRIM40-206ENST00000376724 TMEM250H0YL14 139 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 OR2J3O76001 311 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 IGLC1P0CG04 106 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 GATA3P23771 443 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 UNQ5815/PRO19632Q6UWF5 114 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 LINC00305Q7Z4B0 112 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 FAM24BQ8N5W8 94 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 C5orf56Q8N8D9 126 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 OR5AU1Q8NGC0 362 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 SLC25A2Q9BXI2 301 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 MRPL32Q9BYC8 188 aaKnown RBP10.17□□□□□ -0.78
TRIM40-206ENST00000376724 PRDM13Q9H4Q3 707 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 ZNF355PQ9NSJ1 428 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 ABCA12Q86UK0 2595 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 IGLV11-55A0A075B6I3 123 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 PDE6DO43924 150 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 IGHV3-23P01764 117 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 PSG1P11464 419 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 HIST1H1BP16401 226 aaKnown RBP10.17□□□□□ -0.78
TRIM40-206ENST00000376724 NPPCP23582 126 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 LYZP61626 148 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 RELQ04864 619 aaPredicted RBP10.17□□□□□ -0.78
TRIM40-206ENST00000376724 PQLC2Q6ZP29 291 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 RNF2Q99496 336 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 PPP1R14DQ9NXH3 145 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 GAR1Q9NY12 217 aaKnown RBP10.17□□□□□ -0.78
TRIM40-206ENST00000376724 MOB4Q9Y3A3 225 aa10.17□□□□□ -0.78
TRIM40-206ENST00000376724 DOPEY2Q9Y3R5 2298 aa10.16□□□□□ -0.78
TRIM40-206ENST00000376724 IFITM10A6NMD0 228 aa10.16□□□□□ -0.78
TRIM40-206ENST00000376724 H3BUX3 64 aa10.16□□□□□ -0.78
TRIM40-206ENST00000376724 NDUFB4O95168 129 aa10.16□□□□□ -0.78
TRIM40-206ENST00000376724 SNRPCP09234 159 aaKnown RBP10.16□□□□□ -0.78
TRIM40-206ENST00000376724 RAB4BP61018 213 aa10.16□□□□□ -0.78
TRIM40-206ENST00000376724 LOXL1Q08397 574 aaPredicted RBP10.16□□□□□ -0.78
TRIM40-206ENST00000376724 LBHQ53QV2 105 aaPredicted RBP10.16□□□□□ -0.78
TRIM40-206ENST00000376724 SGMS2Q8NHU3 365 aa10.16□□□□□ -0.78
TRIM40-206ENST00000376724 TMEM68Q96MH6 324 aa10.16□□□□□ -0.78
TRIM40-206ENST00000376724 TMEM167BQ9NRX6 74 aa10.16□□□□□ -0.78
TRIM40-206ENST00000376724 ELOA3CA0A087WX78 387 aaPredicted RBP10.16□□□□□ -0.78
TRIM40-206ENST00000376724 G3V318 75 aa10.16□□□□□ -0.78
TRIM40-206ENST00000376724 NDUFB8O95169 186 aa10.16□□□□□ -0.78
TRIM40-206ENST00000376724 PYYP10082 97 aa10.16□□□□□ -0.78
TRIM40-206ENST00000376724 TMEM241Q24JQ0 296 aa10.16□□□□□ -0.78
TRIM40-206ENST00000376724 CDPF1Q6NVV7 123 aa10.16□□□□□ -0.78
TRIM40-206ENST00000376724 LRRC75A-AS1Q8N1F1 130 aa10.16□□□□□ -0.78
TRIM40-206ENST00000376724 FAM167A-AS1Q96KT0 104 aa10.16□□□□□ -0.78
TRIM40-206ENST00000376724 Q96MF0 132 aa10.16□□□□□ -0.78
TRIM40-206ENST00000376724 DERL1Q9BUN8 251 aa10.16□□□□□ -0.78
TRIM40-206ENST00000376724 SDF2L1Q9HCN8 221 aa10.16□□□□□ -0.78
TRIM40-206ENST00000376724 MDFIC2A0A1B0GVS7 189 aa10.15□□□□□ -0.78
TRIM40-206ENST00000376724 SCO2A0A1W2PP80 73 aa10.15□□□□□ -0.78
TRIM40-206ENST00000376724 GNG7O60262 68 aa10.15□□□□□ -0.78
TRIM40-206ENST00000376724 HYPMO75409 117 aa10.15□□□□□ -0.78
TRIM40-206ENST00000376724 IGKV1-17P01599 117 aa10.15□□□□□ -0.78
TRIM40-206ENST00000376724 PKIAP61925 76 aa10.15□□□□□ -0.78
TRIM40-206ENST00000376724 UBE2L3P68036 154 aaKnown RBP10.15□□□□□ -0.78
TRIM40-206ENST00000376724 ADIRFQ15847 76 aa10.15□□□□□ -0.78
TRIM40-206ENST00000376724 Q56UQ5 140 aa10.15□□□□□ -0.78
TRIM40-206ENST00000376724 C2orf88Q9BSF0 95 aa10.15□□□□□ -0.78
TRIM40-206ENST00000376724 THYN1Q9P016 225 aa10.15□□□□□ -0.78
TRIM40-206ENST00000376724 NAT8Q9UHE5 227 aa10.15□□□□□ -0.78
TRIM40-206ENST00000376724 FBXL7Q9UJT9 491 aa10.15□□□□□ -0.78
TRIM40-206ENST00000376724 NBPF19A0A087WUL8 3843 aa10.15□□□□□ -0.78
TRIM40-206ENST00000376724 F6UZH7 168 aa10.14□□□□□ -0.79
TRIM40-206ENST00000376724 DDTP30046 118 aa10.14□□□□□ -0.79
TRIM40-206ENST00000376724 MFAP4P55083 255 aa10.14□□□□□ -0.79
TRIM40-206ENST00000376724 LEMD1Q68G75 181 aa10.14□□□□□ -0.79
TRIM40-206ENST00000376724 C16orf82Q7Z2V1 217 aa10.14□□□□□ -0.79
TRIM40-206ENST00000376724 PSMG3-AS1Q96PY0 264 aa10.14□□□□□ -0.79
TRIM40-206ENST00000376724 NEU1Q99519 415 aa10.14□□□□□ -0.79
TRIM40-206ENST00000376724 PAXXQ9BUH6 204 aa10.14□□□□□ -0.79
TRIM40-206ENST00000376724 LINC00527Q9UJ94 153 aa10.14□□□□□ -0.79
TRIM40-206ENST00000376724 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.14□□□□□ -0.79
TRIM40-206ENST00000376724 CXorf65A6NEN9 183 aa10.14□□□□□ -0.79
TRIM40-206ENST00000376724 AMY1AP04745 511 aa10.14□□□□□ -0.79
TRIM40-206ENST00000376724 IGHV4-31P0DP07 118 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms