RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 GNG5P63218 68 aa9.34□□□□□ -0.91
TM9SF2-201ENST00000376387 FOXE3Q13461 319 aa9.34□□□□□ -0.91
TM9SF2-201ENST00000376387 DSCAMO60469 2012 aa9.33□□□□□ -0.92
TM9SF2-201ENST00000376387 UBE2L3P68036 154 aaKnown RBP9.33□□□□□ -0.92
TM9SF2-201ENST00000376387 MZT1Q08AG7 82 aa9.33□□□□□ -0.92
TM9SF2-201ENST00000376387 OR5B3Q8NH48 314 aa9.33□□□□□ -0.92
TM9SF2-201ENST00000376387 DUX5Q96PT3 197 aa9.33□□□□□ -0.92
TM9SF2-201ENST00000376387 A0A1W2PNU3 283 aaPredicted RBP9.33□□□□□ -0.92
TM9SF2-201ENST00000376387 OR2T8A6NH00 312 aa9.33□□□□□ -0.92
TM9SF2-201ENST00000376387 HIGD1CA8MV81 97 aa9.33□□□□□ -0.92
TM9SF2-201ENST00000376387 CALYQ9NYX4 217 aa9.33□□□□□ -0.92
TM9SF2-201ENST00000376387 ARL2-SNX15V9GYD0 113 aa9.33□□□□□ -0.92
TM9SF2-201ENST00000376387 ICE1Q9Y2F5 2266 aa9.33□□□□□ -0.92
TM9SF2-201ENST00000376387 A0A1W2PRE2 83 aa9.33□□□□□ -0.92
TM9SF2-201ENST00000376387 TAX1BP3O14907 124 aa9.33□□□□□ -0.92
TM9SF2-201ENST00000376387 C8orf88P0DMB2 117 aa9.33□□□□□ -0.92
TM9SF2-201ENST00000376387 MSMPQ1L6U9 139 aa9.33□□□□□ -0.92
TM9SF2-201ENST00000376387 C17orf58Q2M2W7 97 aa9.33□□□□□ -0.92
TM9SF2-201ENST00000376387 TCF24Q7RTU0 167 aa9.33□□□□□ -0.92
TM9SF2-201ENST00000376387 WIPF2Q8TF74 440 aaPredicted RBP9.33□□□□□ -0.92
TM9SF2-201ENST00000376387 AMMECR1Q9Y4X0 333 aaPredicted RBP9.33□□□□□ -0.92
TM9SF2-201ENST00000376387 OR4C46A6NHA9 309 aa9.32□□□□□ -0.92
TM9SF2-201ENST00000376387 PLAUP00749 431 aa9.32□□□□□ -0.92
TM9SF2-201ENST00000376387 KLF5Q13887 457 aaPredicted RBP9.32□□□□□ -0.92
TM9SF2-201ENST00000376387 HES3Q5TGS1 186 aa9.32□□□□□ -0.92
TM9SF2-201ENST00000376387 TRIB1Q96RU8 372 aa9.32□□□□□ -0.92
TM9SF2-201ENST00000376387 WASHC3Q9Y3C0 194 aa9.32□□□□□ -0.92
TM9SF2-201ENST00000376387 CADP27708 2225 aa9.32□□□□□ -0.92
TM9SF2-201ENST00000376387 F2RL2O00254 374 aa9.32□□□□□ -0.92
TM9SF2-201ENST00000376387 CECR9P0C854 216 aa9.32□□□□□ -0.92
TM9SF2-201ENST00000376387 SEC61GP60059 68 aa9.32□□□□□ -0.92
TM9SF2-201ENST00000376387 ATP1A1-AS1Q5TC04 95 aa9.32□□□□□ -0.92
TM9SF2-201ENST00000376387 PNKDQ8N490 385 aa9.32□□□□□ -0.92
TM9SF2-201ENST00000376387 COMMD5Q9GZQ3 224 aa9.32□□□□□ -0.92
TM9SF2-201ENST00000376387 DYSFO75923 2080 aa9.32□□□□□ -0.92
TM9SF2-201ENST00000376387 DSCAML1Q8TD84 2053 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 TEX50A0A1B0GTY4 177 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 PSMB11A5LHX3 300 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 NUDT3O95989 172 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 LPAL2Q16609 132 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 INO80CQ6PI98 192 aaPredicted RBP9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 LINC00322Q6ZN03 302 aaPredicted RBP9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 ZNF329Q86UD4 541 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 CNEP1R1Q8N9A8 125 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 GRAMD2BQ96HH9 432 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 SAP30LQ9HAJ7 183 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 NAV3Q8IVL0 2385 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 TRGV5A0A0B4J1U4 118 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 MUC21A0A0G2JKD1 596 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 MUC21A0A140T8X8 626 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 E7EUB6 86 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 F8WDY8 70 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 ZNF138P52744 262 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 MUC21Q5SSG8 566 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 GCSAMQ8N6F7 178 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 NRGNQ92686 78 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 LAMA5O15230 3695 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 TAS2R45P59539 299 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 PRCDQ00LT1 54 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 TMEM70Q9BUB7 260 aa9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 PEF1Q9UBV8 284 aaKnown RBP9.31□□□□□ -0.92
TM9SF2-201ENST00000376387 IGHV1-24A0A0C4DH33 117 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 MGST3O14880 152 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 RNF152Q8N8N0 203 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 MDS2Q8NDY4 140 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 PMCHL2Q9BQD1 86 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 SPRY4Q9C004 299 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 TRAV30A0A087WSZ9 112 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 PEX7O00628 323 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 IGKV3-15P01624 115 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 RNASE2P10153 161 aaKnown RBP9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 KIR2DS2P43631 304 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 PATE2Q6UY27 113 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 SSX8Q7RTT4 187 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 RND1Q92730 232 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 C7orf69Q9H7B7 122 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 KALRNO60229 2985 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 SRRM5B3KS81 715 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 CR1LQ2VPA4 569 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 LRRC10Q5BKY1 277 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 BVES-AS1Q5T3Y7 98 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 AMMECR1LQ6DCA0 310 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 ZNF788Q6ZQV5 615 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 SARAFQ96BY9 339 aa9.3□□□□□ -0.92
TM9SF2-201ENST00000376387 SVILO95425 2214 aa9.29□□□□□ -0.92
TM9SF2-201ENST00000376387 DMXL2Q8TDJ6 3036 aa9.29□□□□□ -0.92
TM9SF2-201ENST00000376387 UPK2O00526 184 aa9.29□□□□□ -0.92
TM9SF2-201ENST00000376387 OR2J3O76001 311 aa9.29□□□□□ -0.92
TM9SF2-201ENST00000376387 CGB3P0DN86 165 aa9.29□□□□□ -0.92
TM9SF2-201ENST00000376387 CGB7P0DN87 165 aa9.29□□□□□ -0.92
TM9SF2-201ENST00000376387 ZNF137PP52743 207 aa9.29□□□□□ -0.92
TM9SF2-201ENST00000376387 A0A1B0GXF2 115 aa9.29□□□□□ -0.92
TM9SF2-201ENST00000376387 RUSC1-AS1Q66K80 236 aa9.29□□□□□ -0.92
TM9SF2-201ENST00000376387 FAM231DQ6ZW35 169 aa9.29□□□□□ -0.92
TM9SF2-201ENST00000376387 Q71RC1 249 aaPredicted RBP9.29□□□□□ -0.92
TM9SF2-201ENST00000376387 MRPL36Q9P0J6 103 aaKnown RBP9.29□□□□□ -0.92
TM9SF2-201ENST00000376387 TIMM8BQ9Y5J9 83 aaPredicted RBP9.29□□□□□ -0.92
TM9SF2-201ENST00000376387 FNDC10F2Z333 226 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 SYS1-DBNDD2H3BUS1 97 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 CT45A6P0DMU7 189 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms