RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 SPATA31B1PQ5VZV4 182 aa8.68□□□□□ -1.02
PDPN-202ENST00000376057 ZNF503Q96F45 646 aa8.68□□□□□ -1.02
PDPN-202ENST00000376057 USMG5Q96IX5 58 aa8.68□□□□□ -1.02
PDPN-202ENST00000376057 TMPRSS5Q9H3S3 457 aa8.68□□□□□ -1.02
PDPN-202ENST00000376057 A0A1B0GV50 99 aa8.68□□□□□ -1.02
PDPN-202ENST00000376057 A0A1W2PRE2 83 aa8.68□□□□□ -1.02
PDPN-202ENST00000376057 TIGITQ495A1 244 aa8.68□□□□□ -1.02
PDPN-202ENST00000376057 FAM90A2PQ658T7 463 aa8.68□□□□□ -1.02
PDPN-202ENST00000376057 Q8N2B8 174 aa8.68□□□□□ -1.02
PDPN-202ENST00000376057 CIARTQ8N365 385 aaPredicted RBP8.68□□□□□ -1.02
PDPN-202ENST00000376057 NAV3Q8IVL0 2385 aa8.68□□□□□ -1.02
PDPN-202ENST00000376057 GNG7O60262 68 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 EEF1AKMT3Q96AZ1 226 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 WNK2Q9Y3S1 2297 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 PLXNB1O43157 2135 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 FAM74A7A6NL05 159 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 IGHV4-59P01825 116 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 CTSGP08311 255 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 RHOGP84095 191 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 PNRC1Q12796 327 aaPredicted RBP8.67□□□□□ -1.02
PDPN-202ENST00000376057 GUCA2BQ16661 112 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 ECSCRQ19T08 205 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 ZNF491Q8N8L2 437 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 CLRN3Q8NCR9 226 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 Q8WTZ3 238 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 C11orf52Q96A22 123 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 HIGD1AQ9Y241 93 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 PAGE4O60829 102 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 OR2J3O76001 311 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 IGHV3-48P01763 117 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 RHEBQ15382 184 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 LY6EQ16553 131 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 ZNF343Q6P1L6 599 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 LINC00305Q7Z4B0 112 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 CYB561D1Q8N8Q1 229 aa8.67□□□□□ -1.02
PDPN-202ENST00000376057 ASH1LQ9NR48 2969 aaKnown RBP8.67□□□□□ -1.02
PDPN-202ENST00000376057 MDFIC2A0A1B0GVS7 189 aa8.66□□□□□ -1.02
PDPN-202ENST00000376057 B4DEV8 164 aa8.66□□□□□ -1.02
PDPN-202ENST00000376057 C11orf94C9JXX5 98 aa8.66□□□□□ -1.02
PDPN-202ENST00000376057 G3V318 75 aa8.66□□□□□ -1.02
PDPN-202ENST00000376057 HMGB3O15347 200 aaKnown RBP8.66□□□□□ -1.02
PDPN-202ENST00000376057 ATP5G2Q06055 141 aa8.66□□□□□ -1.02
PDPN-202ENST00000376057 SCGB2A2Q13296 93 aa8.66□□□□□ -1.02
PDPN-202ENST00000376057 C15orf32Q32M92 178 aa8.66□□□□□ -1.02
PDPN-202ENST00000376057 SHANK2-AS3Q9BTD1 123 aa8.66□□□□□ -1.02
PDPN-202ENST00000376057 ZNF355PQ9NSJ1 428 aa8.66□□□□□ -1.02
PDPN-202ENST00000376057 DEFA5Q01523 94 aa8.66□□□□□ -1.02
PDPN-202ENST00000376057 ZNF414Q96IQ9 312 aa8.66□□□□□ -1.02
PDPN-202ENST00000376057 OR51M1Q9H341 326 aa8.66□□□□□ -1.02
PDPN-202ENST00000376057 IGHV3-21A0A0B4J1V1 117 aa8.65□□□□□ -1.02
PDPN-202ENST00000376057 H3BRN7 92 aa8.65□□□□□ -1.02
PDPN-202ENST00000376057 SCO1O75880 301 aa8.65□□□□□ -1.02
PDPN-202ENST00000376057 Q56UQ5 140 aa8.65□□□□□ -1.02
PDPN-202ENST00000376057 LINC00518Q8N0U6 118 aa8.65□□□□□ -1.02
PDPN-202ENST00000376057 OR1B1Q8NGR6 318 aa8.65□□□□□ -1.02
PDPN-202ENST00000376057 RNF125Q96EQ8 232 aa8.65□□□□□ -1.02
PDPN-202ENST00000376057 DOK5Q9P104 306 aa8.65□□□□□ -1.02
PDPN-202ENST00000376057 PTPN13Q12923 2485 aa8.65□□□□□ -1.02
PDPN-202ENST00000376057 SPG11Q96JI7 2443 aa8.65□□□□□ -1.02
PDPN-202ENST00000376057 A0A087WWC5 75 aa8.65□□□□□ -1.03
PDPN-202ENST00000376057 CLDN34H7C241 214 aa8.65□□□□□ -1.03
PDPN-202ENST00000376057 IGHG4P01861 327 aa8.65□□□□□ -1.03
PDPN-202ENST00000376057 BLCAPP62952 87 aa8.65□□□□□ -1.03
PDPN-202ENST00000376057 OR5AU1Q8NGC0 362 aa8.65□□□□□ -1.03
PDPN-202ENST00000376057 RPUSD4Q96CM3 377 aaKnown RBP8.65□□□□□ -1.03
PDPN-202ENST00000376057 FXYD5Q96DB9 178 aa8.65□□□□□ -1.03
PDPN-202ENST00000376057 PAXXQ9BUH6 204 aa8.65□□□□□ -1.03
PDPN-202ENST00000376057 SLC25A39Q9BZJ4 359 aaPredicted RBP8.65□□□□□ -1.03
PDPN-202ENST00000376057 PRSS22Q9GZN4 317 aa8.65□□□□□ -1.03
PDPN-202ENST00000376057 TUBA4BQ9H853 241 aa8.65□□□□□ -1.03
PDPN-202ENST00000376057 DOPEY2Q9Y3R5 2298 aa8.65□□□□□ -1.03
PDPN-202ENST00000376057 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.64□□□□□ -1.03
PDPN-202ENST00000376057 NUPL2O15504 423 aaKnown RBP8.64□□□□□ -1.03
PDPN-202ENST00000376057 S100A6P06703 90 aa8.64□□□□□ -1.03
PDPN-202ENST00000376057 GP9P14770 177 aa8.64□□□□□ -1.03
PDPN-202ENST00000376057 MYCNOSP40205 109 aa8.64□□□□□ -1.03
PDPN-202ENST00000376057 RAB9AP51151 201 aa8.64□□□□□ -1.03
PDPN-202ENST00000376057 RPL15P61313 204 aaKnown RBP8.64□□□□□ -1.03
PDPN-202ENST00000376057 RNF152Q8N8N0 203 aa8.64□□□□□ -1.03
PDPN-202ENST00000376057 TVP23CQ96ET8 276 aa8.64□□□□□ -1.03
PDPN-202ENST00000376057 CCDC140Q96MF4 163 aa8.64□□□□□ -1.03
PDPN-202ENST00000376057 UHRF2Q96PU4 802 aa8.64□□□□□ -1.03
PDPN-202ENST00000376057 NIPSNAP3BQ9BS92 247 aa8.64□□□□□ -1.03
PDPN-202ENST00000376057 GSX1Q9H4S2 264 aaPredicted RBP8.64□□□□□ -1.03
PDPN-202ENST00000376057 YTHDF2Q9Y5A9 579 aaKnown RBP8.64□□□□□ -1.03
PDPN-202ENST00000376057 LY96Q9Y6Y9 160 aa8.64□□□□□ -1.03
PDPN-202ENST00000376057 A0A0G2JLM5 398 aa8.64□□□□□ -1.03
PDPN-202ENST00000376057 H3BQ15 152 aa8.64□□□□□ -1.03
PDPN-202ENST00000376057 ORM2P19652 201 aa8.64□□□□□ -1.03
PDPN-202ENST00000376057 ADMP35318 185 aa8.64□□□□□ -1.03
PDPN-202ENST00000376057 RELQ04864 619 aaPredicted RBP8.64□□□□□ -1.03
PDPN-202ENST00000376057 MORN5Q5VZ52 161 aa8.64□□□□□ -1.03
PDPN-202ENST00000376057 OR4F5Q8NH21 305 aa8.64□□□□□ -1.03
PDPN-202ENST00000376057 OR4F4Q96R69 305 aa8.64□□□□□ -1.03
PDPN-202ENST00000376057 NPFFR1Q9GZQ6 430 aa8.64□□□□□ -1.03
PDPN-202ENST00000376057 NBPF19A0A087WUL8 3843 aa8.64□□□□□ -1.03
PDPN-202ENST00000376057 SH2D7A6NKC9 451 aaPredicted RBP8.63□□□□□ -1.03
PDPN-202ENST00000376057 HNF1AP20823 631 aa8.63□□□□□ -1.03
PDPN-202ENST00000376057 ATRAIDQ6UW56 229 aa8.63□□□□□ -1.03
PDPN-202ENST00000376057 ARL6IP6Q8N6S5 226 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms