RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 MUC3AQ02505 3323 aa11.19□□□□□ -0.62
MCF2L-204ENST00000375608 BOD1L1Q8NFC6 3051 aa11.19□□□□□ -0.62
MCF2L-204ENST00000375608 C21orf140B9A014 251 aa11.19□□□□□ -0.62
MCF2L-204ENST00000375608 HLA-DRB1P01911 266 aa11.19□□□□□ -0.62
MCF2L-204ENST00000375608 CRYABP02511 175 aaKnown RBP11.19□□□□□ -0.62
MCF2L-204ENST00000375608 KIR2DL2P43627 348 aaPredicted RBP11.19□□□□□ -0.62
MCF2L-204ENST00000375608 VMA21Q3ZAQ7 101 aa11.19□□□□□ -0.62
MCF2L-204ENST00000375608 FOXA2Q9Y261 457 aaPredicted RBP11.19□□□□□ -0.62
MCF2L-204ENST00000375608 IGHV1-69-2A0A0G2JMI3 117 aa11.18□□□□□ -0.62
MCF2L-204ENST00000375608 HES1Q14469 280 aa11.18□□□□□ -0.62
MCF2L-204ENST00000375608 EXOC3-AS1Q8N2X6 119 aa11.18□□□□□ -0.62
MCF2L-204ENST00000375608 C18orf15Q96N68 181 aa11.18□□□□□ -0.62
MCF2L-204ENST00000375608 TMUB1Q9BVT8 246 aa11.18□□□□□ -0.62
MCF2L-204ENST00000375608 GAL3ST2Q9H3Q3 398 aa11.18□□□□□ -0.62
MCF2L-204ENST00000375608 RPP21Q9H633 154 aaKnown RBP11.18□□□□□ -0.62
MCF2L-204ENST00000375608 EPDR1Q9UM22 224 aa11.18□□□□□ -0.62
MCF2L-204ENST00000375608 IGHV3-35A0A0C4DH35 117 aa11.18□□□□□ -0.62
MCF2L-204ENST00000375608 GPR82Q96P67 336 aa11.18□□□□□ -0.62
MCF2L-204ENST00000375608 AP5S1Q9NUS5 200 aa11.18□□□□□ -0.62
MCF2L-204ENST00000375608 IGHV3OR16-8A0A075B7F1 116 aa11.18□□□□□ -0.62
MCF2L-204ENST00000375608 SYS1-DBNDD2H3BUS1 97 aa11.18□□□□□ -0.62
MCF2L-204ENST00000375608 RNASE2P10153 161 aaKnown RBP11.18□□□□□ -0.62
MCF2L-204ENST00000375608 ZNF503Q96F45 646 aa11.18□□□□□ -0.62
MCF2L-204ENST00000375608 TMEM14BQ9NUH8 114 aa11.18□□□□□ -0.62
MCF2L-204ENST00000375608 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.18□□□□□ -0.628e-7■■■□□ 15.1
MCF2L-204ENST00000375608 H3BUT2 72 aa11.17□□□□□ -0.62
MCF2L-204ENST00000375608 CSN1S1P47710 185 aa11.17□□□□□ -0.62
MCF2L-204ENST00000375608 LOXL3P58215 753 aa11.17□□□□□ -0.62
MCF2L-204ENST00000375608 PRR7Q8TB68 274 aa11.17□□□□□ -0.62
MCF2L-204ENST00000375608 NEUROG1Q92886 237 aa11.17□□□□□ -0.62
MCF2L-204ENST00000375608 LY96Q9Y6Y9 160 aa11.17□□□□□ -0.62
MCF2L-204ENST00000375608 CEP192Q8TEP8 1941 aa11.17□□□□□ -0.62
MCF2L-204ENST00000375608 J3QW42 95 aa11.17□□□□□ -0.62
MCF2L-204ENST00000375608 TEX45Q8NA69 505 aa11.17□□□□□ -0.62
MCF2L-204ENST00000375608 MEGF9Q9H1U4 602 aa11.17□□□□□ -0.62
MCF2L-204ENST00000375608 HSPB8Q9UJY1 196 aa11.17□□□□□ -0.62
MCF2L-204ENST00000375608 TRGV8A0A0C4DH27 118 aa11.17□□□□□ -0.62
MCF2L-204ENST00000375608 SMIM27A0A1W2PRY6 76 aa11.17□□□□□ -0.62
MCF2L-204ENST00000375608 FAM27E3Q08E93 113 aa11.17□□□□□ -0.62
MCF2L-204ENST00000375608 DIAPH2-AS1Q14236 149 aa11.17□□□□□ -0.62
MCF2L-204ENST00000375608 GDF5OSQ5U4N7 250 aa11.17□□□□□ -0.62
MCF2L-204ENST00000375608 C16orf54Q6UWD8 224 aa11.17□□□□□ -0.62
MCF2L-204ENST00000375608 MRPS16Q9Y3D3 137 aaKnown RBP11.17□□□□□ -0.62
MCF2L-204ENST00000375608 AARDQ4LEZ3 155 aa11.16□□□□□ -0.62
MCF2L-204ENST00000375608 THYN1Q9P016 225 aa11.16□□□□□ -0.62
MCF2L-204ENST00000375608 C7orf71A4D174 169 aa11.16□□□□□ -0.62
MCF2L-204ENST00000375608 S100A7AQ86SG5 101 aa11.16□□□□□ -0.62
MCF2L-204ENST00000375608 C1orf159Q96HA4 380 aa11.16□□□□□ -0.62
MCF2L-204ENST00000375608 MRPL32Q9BYC8 188 aaKnown RBP11.16□□□□□ -0.62
MCF2L-204ENST00000375608 Q9H3A6 140 aa11.16□□□□□ -0.62
MCF2L-204ENST00000375608 CST9LQ9H4G1 147 aa11.16□□□□□ -0.62
MCF2L-204ENST00000375608 IGHV2-26A0A0B4J1V2 119 aa11.16□□□□□ -0.62
MCF2L-204ENST00000375608 NDUFB3O43676 98 aa11.16□□□□□ -0.62
MCF2L-204ENST00000375608 LIPFP07098 398 aa11.16□□□□□ -0.62
MCF2L-204ENST00000375608 GPR183P32249 361 aa11.16□□□□□ -0.62
MCF2L-204ENST00000375608 SPG11Q96JI7 2443 aa11.16□□□□□ -0.62
MCF2L-204ENST00000375608 E7EUB6 86 aa11.15□□□□□ -0.62
MCF2L-204ENST00000375608 CTRLP40313 264 aa11.15□□□□□ -0.62
MCF2L-204ENST00000375608 MRPL52Q86TS9 123 aaKnown RBP11.15□□□□□ -0.62
MCF2L-204ENST00000375608 ZNF329Q86UD4 541 aa11.15□□□□□ -0.62
MCF2L-204ENST00000375608 SLC25A2Q9BXI2 301 aa11.15□□□□□ -0.62
MCF2L-204ENST00000375608 TRAV17A0A0B4J275 112 aa11.15□□□□□ -0.62
MCF2L-204ENST00000375608 C17orf58Q2M2W7 97 aa11.15□□□□□ -0.62
MCF2L-204ENST00000375608 ZNF714Q96N38 554 aa11.15□□□□□ -0.62
MCF2L-204ENST00000375608 CHODLQ9H9P2 273 aa11.15□□□□□ -0.62
MCF2L-204ENST00000375608 MRPL27Q9P0M9 148 aaKnown RBP11.15□□□□□ -0.62
MCF2L-204ENST00000375608 TET2Q6N021 2002 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-204ENST00000375608 GAGE12BA1L429 117 aa11.15□□□□□ -0.63
MCF2L-204ENST00000375608 K7EQM0 130 aa11.15□□□□□ -0.63
MCF2L-204ENST00000375608 ESDP10768 282 aa11.15□□□□□ -0.63
MCF2L-204ENST00000375608 PSG9Q00887 426 aa11.15□□□□□ -0.63
MCF2L-204ENST00000375608 Q8N976 141 aa11.15□□□□□ -0.63
MCF2L-204ENST00000375608 C19orf24Q9BVV8 132 aa11.15□□□□□ -0.63
MCF2L-204ENST00000375608 EIF4EBP1Q13541 118 aaPredicted RBP11.14□□□□□ -0.63
MCF2L-204ENST00000375608 TMEM249Q2WGJ8 235 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 UBALD2Q8IYN6 164 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 VSTM2AQ8TAG5 236 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 ZNF257Q9Y2Q1 563 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 COL5A1P20908 1838 aaPredicted RBP11.14□□□□□ -0.63
MCF2L-204ENST00000375608 IGHV1-24A0A0C4DH33 117 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 IGLC7A0M8Q6 106 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 FAM90A9PA6NNJ1 464 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 IGLV2-8P01709 118 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 PRSS1P07477 247 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 GCSHP23434 173 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 RPL27AP46776 148 aaKnown RBP11.14□□□□□ -0.63
MCF2L-204ENST00000375608 RBPMS2Q6ZRY4 209 aaKnown RBP11.14□□□□□ -0.63
MCF2L-204ENST00000375608 PNKDQ8N490 385 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 OR4C13Q8NGP0 309 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 PRR33A8MZF0 331 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 IGKV3-15P01624 115 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 TMPRSS3P57727 454 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 MSMPQ1L6U9 139 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 C5orf17Q8NAS9 161 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 MDS2Q8NDY4 140 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 TPSG1Q9NRR2 321 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 HIGD1AQ9Y241 93 aa11.14□□□□□ -0.63
MCF2L-204ENST00000375608 TCRBV4S1A1TA0A5B7 111 aa11.13□□□□□ -0.63
MCF2L-204ENST00000375608 OCIAD2Q56VL3 154 aa11.13□□□□□ -0.63
MCF2L-204ENST00000375608 RPRMLQ8N4K4 120 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms