RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 C17orf98A8MV24 154 aa9.91□□□□□ -0.82
C9orf3-203ENST00000375315 ZNF788Q6ZQV5 615 aa9.91□□□□□ -0.82
C9orf3-203ENST00000375315 FAM222BQ8WU58 562 aa9.91□□□□□ -0.82
C9orf3-203ENST00000375315 NANOS1Q8WY41 292 aaKnown RBP9.91□□□□□ -0.82
C9orf3-203ENST00000375315 FAM168AQ92567 244 aa9.91□□□□□ -0.82
C9orf3-203ENST00000375315 RAB37Q96AX2 223 aa9.91□□□□□ -0.82
C9orf3-203ENST00000375315 C1QTNF5Q9BXJ0 243 aa9.91□□□□□ -0.82
C9orf3-203ENST00000375315 MED13LQ71F56 2210 aa9.91□□□□□ -0.82
C9orf3-203ENST00000375315 ZNF474Q6S9Z5 364 aaPredicted RBP9.91□□□□□ -0.82
C9orf3-203ENST00000375315 C22orf34Q6ZV56 151 aa9.91□□□□□ -0.82
C9orf3-203ENST00000375315 OR52E5Q8NH55 327 aa9.91□□□□□ -0.82
C9orf3-203ENST00000375315 IGF2BP2-AS1Q96M15 143 aa9.91□□□□□ -0.82
C9orf3-203ENST00000375315 ANKRD30BLA7E2S9 258 aa9.91□□□□□ -0.82
C9orf3-203ENST00000375315 K7EQM0 130 aa9.91□□□□□ -0.82
C9orf3-203ENST00000375315 GRPP07492 148 aa9.91□□□□□ -0.82
C9orf3-203ENST00000375315 ADH4P08319 380 aa9.91□□□□□ -0.82
C9orf3-203ENST00000375315 TBC1D28Q2M2D7 210 aa9.91□□□□□ -0.82
C9orf3-203ENST00000375315 MRAP2Q96G30 205 aa9.91□□□□□ -0.82
C9orf3-203ENST00000375315 HILPDAQ9Y5L2 63 aa9.91□□□□□ -0.82
C9orf3-203ENST00000375315 TEPPQ6URK8 271 aa9.9□□□□□ -0.82
C9orf3-203ENST00000375315 FAM231DQ6ZW35 169 aa9.9□□□□□ -0.82
C9orf3-203ENST00000375315 WDR31Q8NA23 367 aa9.9□□□□□ -0.82
C9orf3-203ENST00000375315 MBD6Q96DN6 1003 aa9.9□□□□□ -0.82
C9orf3-203ENST00000375315 SERTM2A0A1B0GWG4 89 aa9.9□□□□□ -0.82
C9orf3-203ENST00000375315 AESQ08117 197 aa9.9□□□□□ -0.82
C9orf3-203ENST00000375315 LINC01545Q5VT33 79 aa9.9□□□□□ -0.82
C9orf3-203ENST00000375315 MIR17HGQ75NE6 70 aa9.9□□□□□ -0.82
C9orf3-203ENST00000375315 LRRC29Q8WV35 223 aa9.9□□□□□ -0.82
C9orf3-203ENST00000375315 LSM4Q9Y4Z0 139 aaKnown RBP9.9□□□□□ -0.82
C9orf3-203ENST00000375315 HIVEP3Q5T1R4 2406 aa9.9□□□□□ -0.83
C9orf3-203ENST00000375315 LRBAP50851 2863 aa9.9□□□□□ -0.83
C9orf3-203ENST00000375315 ACTL6BO94805 426 aa9.89□□□□□ -0.83
C9orf3-203ENST00000375315 FOXA3P55318 350 aaPredicted RBP9.89□□□□□ -0.83
C9orf3-203ENST00000375315 RTL8BQ17RB0 113 aa9.89□□□□□ -0.83
C9orf3-203ENST00000375315 CCDC144NLQ6NUI1 221 aa9.89□□□□□ -0.83
C9orf3-203ENST00000375315 ZNF497Q6ZNH5 498 aa9.89□□□□□ -0.83
C9orf3-203ENST00000375315 NHLRC2Q8NBF2 726 aa9.89□□□□□ -0.83
C9orf3-203ENST00000375315 OR4A16Q8NH70 328 aa9.89□□□□□ -0.83
C9orf3-203ENST00000375315 MCRIP2Q9BUT9 160 aaKnown RBP9.89□□□□□ -0.83
C9orf3-203ENST00000375315 RABAC1Q9UI14 185 aa9.89□□□□□ -0.83
C9orf3-203ENST00000375315 TFF1P04155 84 aa9.89□□□□□ -0.83
C9orf3-203ENST00000375315 MPV17P39210 176 aa9.89□□□□□ -0.83
C9orf3-203ENST00000375315 TRAT1Q6PIZ9 186 aa9.89□□□□□ -0.83
C9orf3-203ENST00000375315 OBP2BQ9NPH6 170 aa9.89□□□□□ -0.83
C9orf3-203ENST00000375315 SPG11Q96JI7 2443 aa9.89□□□□□ -0.83
C9orf3-203ENST00000375315 ANKHD1Q8IWZ3 2542 aaKnown RBP9.89□□□□□ -0.83
C9orf3-203ENST00000375315 HIGD1CA8MV81 97 aa9.89□□□□□ -0.83
C9orf3-203ENST00000375315 CECR9P0C854 216 aa9.89□□□□□ -0.83
C9orf3-203ENST00000375315 TMEM95Q3KNT9 176 aa9.89□□□□□ -0.83
C9orf3-203ENST00000375315 ADTRPQ96IZ2 230 aa9.89□□□□□ -0.83
C9orf3-203ENST00000375315 SPATA25Q9BR10 227 aa9.89□□□□□ -0.83
C9orf3-203ENST00000375315 IDI2-AS1Q9NZ38 188 aa9.89□□□□□ -0.83
C9orf3-203ENST00000375315 OR9G9P0C7N8 305 aa9.88□□□□□ -0.83
C9orf3-203ENST00000375315 HBBP68871 147 aa9.88□□□□□ -0.83
C9orf3-203ENST00000375315 TIMM23BQ5SRD1 257 aa9.88□□□□□ -0.83
C9orf3-203ENST00000375315 FAM57AQ8TBR7 257 aa9.88□□□□□ -0.83
C9orf3-203ENST00000375315 DPF1Q92782 380 aa9.88□□□□□ -0.83
C9orf3-203ENST00000375315 GEMIN7Q9H840 131 aaKnown RBP9.88□□□□□ -0.83
C9orf3-203ENST00000375315 MAP1AP78559 2803 aaPredicted RBP9.88□□□□□ -0.83
C9orf3-203ENST00000375315 A0A0G2JNJ9 132 aa9.88□□□□□ -0.83
C9orf3-203ENST00000375315 A1L4Q6 167 aa9.88□□□□□ -0.83
C9orf3-203ENST00000375315 GGTLC3B5MD39 225 aa9.88□□□□□ -0.83
C9orf3-203ENST00000375315 FOXE3Q13461 319 aa9.88□□□□□ -0.83
C9orf3-203ENST00000375315 SAMD5Q5TGI4 173 aa9.88□□□□□ -0.83
C9orf3-203ENST00000375315 OR2Z1Q8NG97 314 aa9.88□□□□□ -0.83
C9orf3-203ENST00000375315 OR9G4Q8NGQ1 327 aa9.88□□□□□ -0.83
C9orf3-203ENST00000375315 Q9UFV3 132 aa9.88□□□□□ -0.83
C9orf3-203ENST00000375315 MYO18BQ8IUG5 2567 aa9.88□□□□□ -0.83
C9orf3-203ENST00000375315 FAM90A27PA6NNH2 459 aa9.87□□□□□ -0.83
C9orf3-203ENST00000375315 PRSS46E5RG02 174 aa9.87□□□□□ -0.83
C9orf3-203ENST00000375315 TAS2R45P59539 299 aa9.87□□□□□ -0.83
C9orf3-203ENST00000375315 ADAMTSL5Q6ZMM2 481 aa9.87□□□□□ -0.83
C9orf3-203ENST00000375315 COLCA1Q6ZS62 124 aa9.87□□□□□ -0.83
C9orf3-203ENST00000375315 ZNF826PQ6ZT77 177 aa9.87□□□□□ -0.83
C9orf3-203ENST00000375315 OR4X2Q8NGF9 303 aa9.87□□□□□ -0.83
C9orf3-203ENST00000375315 MBNL3Q9NUK0 354 aaKnown RBP9.87□□□□□ -0.83
C9orf3-203ENST00000375315 USF3Q68DE3 2245 aa9.87□□□□□ -0.83
C9orf3-203ENST00000375315 A0A1B0GXF2 115 aa9.87□□□□□ -0.83
C9orf3-203ENST00000375315 BRWD1-AS2P59051 145 aa9.87□□□□□ -0.83
C9orf3-203ENST00000375315 EIF4EBP1Q13541 118 aaPredicted RBP9.87□□□□□ -0.83
C9orf3-203ENST00000375315 PRAMEF5Q5TYX0 476 aa9.87□□□□□ -0.83
C9orf3-203ENST00000375315 PRAMEF6Q5VXH4 476 aa9.87□□□□□ -0.83
C9orf3-203ENST00000375315 Q6P435 159 aa9.87□□□□□ -0.83
C9orf3-203ENST00000375315 BLNKQ8WV28 456 aa9.87□□□□□ -0.83
C9orf3-203ENST00000375315 GALMQ96C23 342 aa9.87□□□□□ -0.83
C9orf3-203ENST00000375315 HSD17B10Q99714 261 aaKnown RBP9.87□□□□□ -0.83
C9orf3-203ENST00000375315 FAM208BQ5VWN6 2430 aa9.87□□□□□ -0.83
C9orf3-203ENST00000375315 FOXI2Q6ZQN5 318 aa9.87□□□□□ -0.83
C9orf3-203ENST00000375315 MBD3L4A6NDZ8 208 aaPredicted RBP9.86□□□□□ -0.83
C9orf3-203ENST00000375315 MBD3L3A6NE82 208 aaPredicted RBP9.86□□□□□ -0.83
C9orf3-203ENST00000375315 MBD3L5A6NJ08 208 aaPredicted RBP9.86□□□□□ -0.83
C9orf3-203ENST00000375315 TIMM8AO60220 97 aaPredicted RBP9.86□□□□□ -0.83
C9orf3-203ENST00000375315 FGF6P10767 208 aa9.86□□□□□ -0.83
C9orf3-203ENST00000375315 GNG3P63215 75 aa9.86□□□□□ -0.83
C9orf3-203ENST00000375315 GUSBP1Q15486 140 aa9.86□□□□□ -0.83
C9orf3-203ENST00000375315 LTC4SQ16873 150 aa9.86□□□□□ -0.83
C9orf3-203ENST00000375315 TEX45Q8NA69 505 aa9.86□□□□□ -0.83
C9orf3-203ENST00000375315 MBD3L2Q8NHZ7 208 aaPredicted RBP9.86□□□□□ -0.83
C9orf3-203ENST00000375315 TIMM8BQ9Y5J9 83 aaPredicted RBP9.86□□□□□ -0.83
C9orf3-203ENST00000375315 SIVA1O15304 175 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms