RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 FABP1P07148 127 aa10.05□□□□□ -0.8
PTCH1-202ENST00000375271 RPS19P39019 145 aaKnown RBP10.05□□□□□ -0.8
PTCH1-202ENST00000375271 PSMB3P49720 205 aa10.05□□□□□ -0.8
PTCH1-202ENST00000375271 RORCP51449 518 aa10.05□□□□□ -0.8
PTCH1-202ENST00000375271 OXA1LQ15070 435 aa10.05□□□□□ -0.8
PTCH1-202ENST00000375271 C2orf83Q53S99 150 aa10.05□□□□□ -0.8
PTCH1-202ENST00000375271 NPIPB3Q92617 1050 aa10.05□□□□□ -0.8
PTCH1-202ENST00000375271 SAV1Q9H4B6 383 aaPredicted RBP10.05□□□□□ -0.8
PTCH1-202ENST00000375271 CACFD1Q9UGQ2 172 aa10.05□□□□□ -0.8
PTCH1-202ENST00000375271 C14orf166Q9Y224 244 aaKnown RBP10.05□□□□□ -0.8
PTCH1-202ENST00000375271 DYNC1H1Q14204 4646 aaKnown RBP10.04□□□□□ -0.8
PTCH1-202ENST00000375271 TEX13DA0A0J9YY54 714 aaPredicted RBP10.04□□□□□ -0.8
PTCH1-202ENST00000375271 P0C879 139 aa10.04□□□□□ -0.8
PTCH1-202ENST00000375271 TGFBR1P36897 503 aa10.04□□□□□ -0.8
PTCH1-202ENST00000375271 PSG9Q00887 426 aa10.04□□□□□ -0.8
PTCH1-202ENST00000375271 BSXQ3C1V8 233 aa10.04□□□□□ -0.8
PTCH1-202ENST00000375271 SAMD13Q5VXD3 122 aa10.04□□□□□ -0.8
PTCH1-202ENST00000375271 OR51G1Q8NGK1 321 aa10.04□□□□□ -0.8
PTCH1-202ENST00000375271 OR52E5Q8NH55 327 aa10.04□□□□□ -0.8
PTCH1-202ENST00000375271 RNF125Q96EQ8 232 aa10.04□□□□□ -0.8
PTCH1-202ENST00000375271 KRTAP4-5Q9BYR2 181 aa10.04□□□□□ -0.8
PTCH1-202ENST00000375271 KLK11Q9UBX7 282 aa10.04□□□□□ -0.8
PTCH1-202ENST00000375271 PKD1P98161 4303 aa10.04□□□□□ -0.8
PTCH1-202ENST00000375271 ZFP92A6NM28 416 aa10.03□□□□□ -0.8
PTCH1-202ENST00000375271 TBPP20226 339 aa10.03□□□□□ -0.8
PTCH1-202ENST00000375271 UCP1P25874 307 aa10.03□□□□□ -0.8
PTCH1-202ENST00000375271 GDF5OSQ5U4N7 250 aa10.03□□□□□ -0.8
PTCH1-202ENST00000375271 OR8G2PQ6IF36 304 aa10.03□□□□□ -0.8
PTCH1-202ENST00000375271 C6orf223Q8N319 242 aa10.03□□□□□ -0.8
PTCH1-202ENST00000375271 CACNG5Q9UF02 275 aa10.03□□□□□ -0.8
PTCH1-202ENST00000375271 GABARAPH6UMI1 98 aa10.02□□□□□ -0.81
PTCH1-202ENST00000375271 GABARAPO95166 117 aa10.02□□□□□ -0.81
PTCH1-202ENST00000375271 NUDT3O95989 172 aa10.02□□□□□ -0.81
PTCH1-202ENST00000375271 PSG1P11464 419 aa10.02□□□□□ -0.81
PTCH1-202ENST00000375271 CCL18P55774 89 aa10.02□□□□□ -0.81
PTCH1-202ENST00000375271 TNP2Q05952 138 aa10.02□□□□□ -0.81
PTCH1-202ENST00000375271 CLINT1Q14677 625 aa10.02□□□□□ -0.81
PTCH1-202ENST00000375271 OR8I2Q8N0Y5 310 aa10.02□□□□□ -0.81
PTCH1-202ENST00000375271 RBPMSQ93062 196 aaKnown RBP10.02□□□□□ -0.81
PTCH1-202ENST00000375271 SLC35E1Q96K37 410 aa10.02□□□□□ -0.81
PTCH1-202ENST00000375271 SLC35B3Q9H1N7 401 aa10.02□□□□□ -0.81
PTCH1-202ENST00000375271 RPRMQ9NS64 109 aa10.02□□□□□ -0.81
PTCH1-202ENST00000375271 A0A0G2JRQ6 117 aa10.01□□□□□ -0.81
PTCH1-202ENST00000375271 NBDYA0A0U1RRE5 68 aa10.01□□□□□ -0.81
PTCH1-202ENST00000375271 NXPH3O95157 252 aa10.01□□□□□ -0.81
PTCH1-202ENST00000375271 CD3DP04234 171 aa10.01□□□□□ -0.81
PTCH1-202ENST00000375271 OR5AC1P0C628 307 aa10.01□□□□□ -0.81
PTCH1-202ENST00000375271 ALDH3B2P48448 385 aa10.01□□□□□ -0.81
PTCH1-202ENST00000375271 DEFB1P60022 68 aa10.01□□□□□ -0.81
PTCH1-202ENST00000375271 LYZP61626 148 aa10.01□□□□□ -0.81
PTCH1-202ENST00000375271 SUPT4H1P63272 117 aaKnown RBP10.01□□□□□ -0.81
PTCH1-202ENST00000375271 KLF9Q13886 244 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-202ENST00000375271 FAM78BQ5VT40 261 aa10.01□□□□□ -0.81
PTCH1-202ENST00000375271 MZT2AQ6P582 158 aa10.01□□□□□ -0.81
PTCH1-202ENST00000375271 LHFPL1Q86WI0 220 aa10.01□□□□□ -0.81
PTCH1-202ENST00000375271 OR13C8Q8NGS7 320 aa10.01□□□□□ -0.81
PTCH1-202ENST00000375271 TERB2Q8NHR7 220 aa10.01□□□□□ -0.81
PTCH1-202ENST00000375271 C16orf92Q96LL3 132 aa10.01□□□□□ -0.81
PTCH1-202ENST00000375271 CLUHP3Q96NS8 147 aa10.01□□□□□ -0.81
PTCH1-202ENST00000375271 TMEM222Q9H0R3 208 aa10.01□□□□□ -0.81
PTCH1-202ENST00000375271 BOLA1Q9Y3E2 137 aa10.01□□□□□ -0.81
PTCH1-202ENST00000375271 F5H768 121 aa10□□□□□ -0.81
PTCH1-202ENST00000375271 ISLRO14498 428 aa10□□□□□ -0.81
PTCH1-202ENST00000375271 INSP01308 110 aa10□□□□□ -0.81
PTCH1-202ENST00000375271 DEFB130BP0DP73 79 aa10□□□□□ -0.81
PTCH1-202ENST00000375271 DEFB130AP0DP74 79 aa10□□□□□ -0.81
PTCH1-202ENST00000375271 MEOX2P50222 304 aa10□□□□□ -0.81
PTCH1-202ENST00000375271 C1orf194Q5T5A4 169 aa10□□□□□ -0.81
PTCH1-202ENST00000375271 TMEM268Q5VZI3 342 aa10□□□□□ -0.81
PTCH1-202ENST00000375271 ZNF709Q8N972 641 aa10□□□□□ -0.81
PTCH1-202ENST00000375271 OR4C16Q8NGL9 310 aa10□□□□□ -0.81
PTCH1-202ENST00000375271 MARCH1Q8TCQ1 289 aa10□□□□□ -0.81
PTCH1-202ENST00000375271 C15orf40Q8WUR7 153 aa10□□□□□ -0.81
PTCH1-202ENST00000375271 ABHD1Q96SE0 405 aa10□□□□□ -0.81
PTCH1-202ENST00000375271 WDR12Q9GZL7 423 aaKnown RBP10□□□□□ -0.81
PTCH1-202ENST00000375271 NACAE9PAV3 2078 aa10□□□□□ -0.81
PTCH1-202ENST00000375271 LYRM9A8MSI8 78 aa9.99□□□□□ -0.81
PTCH1-202ENST00000375271 HPGDSO60760 199 aa9.99□□□□□ -0.81
PTCH1-202ENST00000375271 RAB3DO95716 219 aa9.99□□□□□ -0.81
PTCH1-202ENST00000375271 SULT1A3P0DMM9 295 aa9.99□□□□□ -0.81
PTCH1-202ENST00000375271 SULT1A4P0DMN0 295 aa9.99□□□□□ -0.81
PTCH1-202ENST00000375271 ELK1P19419 428 aa9.99□□□□□ -0.81
PTCH1-202ENST00000375271 S100A7P31151 101 aa9.99□□□□□ -0.81
PTCH1-202ENST00000375271 GALR1P47211 349 aa9.99□□□□□ -0.81
PTCH1-202ENST00000375271 TAS2R19P59542 299 aa9.99□□□□□ -0.81
PTCH1-202ENST00000375271 ZNF79Q15937 498 aa9.99□□□□□ -0.81
PTCH1-202ENST00000375271 AP3S1Q92572 193 aa9.99□□□□□ -0.81
PTCH1-202ENST00000375271 SCRT2Q9NQ03 307 aa9.99□□□□□ -0.81
PTCH1-202ENST00000375271 DOK5Q9P104 306 aa9.99□□□□□ -0.81
PTCH1-202ENST00000375271 U3KQ87 197 aa9.99□□□□□ -0.81
PTCH1-202ENST00000375271 SNRPGP15A8MWD9 76 aa9.98□□□□□ -0.81
PTCH1-202ENST00000375271 CDS2O95674 445 aa9.98□□□□□ -0.81
PTCH1-202ENST00000375271 ZNF182P17025 639 aaPredicted RBP9.98□□□□□ -0.81
PTCH1-202ENST00000375271 PAX9P55771 341 aa9.98□□□□□ -0.81
PTCH1-202ENST00000375271 B2MP61769 119 aa9.98□□□□□ -0.81
PTCH1-202ENST00000375271 LGI3Q8N145 548 aa9.98□□□□□ -0.81
PTCH1-202ENST00000375271 C1orf158Q8N1D5 194 aa9.98□□□□□ -0.81
PTCH1-202ENST00000375271 IGF2BP2-AS1Q96M15 143 aa9.98□□□□□ -0.81
PTCH1-202ENST00000375271 NAA60Q9H7X0 242 aa9.98□□□□□ -0.81
PTCH1-202ENST00000375271 PPP1R14DQ9NXH3 145 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms