RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 LINC00869P0C866 280 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 M6PRP20645 277 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 PPIFP30405 207 aaKnown RBP8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 ELLP55199 621 aaPredicted RBP8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 SELENOTP62341 195 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 RHOGP84095 191 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 ATP5G2Q06055 141 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 MIC13Q5XKP0 118 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 Q6ZRG5 221 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 NECAP1Q8NC96 275 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 OR10G4Q8NGN3 311 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 OR10G9Q8NGN4 311 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 OR10G7Q8NGN6 311 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 CXorf58Q96LI9 332 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 MS4A10Q96PG2 267 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 VSIRQ9H7M9 311 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 RPRMQ9NS64 109 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 SLC39A9Q9NUM3 307 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 C21orf62Q9NYP8 219 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 TSSC4Q9Y5U2 329 aaPredicted RBP8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 IGKV1D-37A0A075B6S9 117 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 FAM223BA6NKX1 122 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 FABP1P07148 127 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 H2AFB1P0C5Y9 115 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 FCGR2BP31994 310 aaPredicted RBP8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 FHITP49789 147 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 RAB2AP61019 212 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 B2MP61769 119 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 PRR20EP86478 221 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 PRR20CP86479 221 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 PRR20DP86480 221 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 PRR20BP86481 221 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 PRR20AP86496 221 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 EGFEM1PQ0D2K5 195 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 PXDC1Q5TGL8 231 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 FAM223AQ8IWN6 122 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 SLC7A5P1Q8MH63 180 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 STPG3Q8N7X2 389 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 LINC00482Q8N8I6 264 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 BPIFCQ8NFQ6 507 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 OR4X2Q8NGF9 303 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 ACTR3CQ9C0K3 210 aaPredicted RBP8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 MED9Q9NWA0 146 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 PFDN2Q9UHV9 154 aa8.45□□□□□ -1.06
HLA-DQA1-202ENST00000374949 MFSD2BA6NFX1 497 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 NUDT19A8MXV4 375 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 TEX46H3BTG2 121 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 GNG7O60262 68 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 SCGB2A1O75556 95 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 YIF1AO95070 293 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 IGLV1-40P01703 118 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 TRGV3P03979 118 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 IGLC1P0CG04 106 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 GATA2P23769 480 aaPredicted RBP8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 CFHR3Q02985 330 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 ZNF90Q03938 601 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 ZNF616Q08AN1 781 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 C15orf32Q32M92 178 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 TIGITQ495A1 244 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 Q56UQ5 140 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 RPP25LQ8N5L8 163 aaKnown RBP8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 MBD3L1Q8WWY6 194 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 DPF1Q92782 380 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 EEF1AKMT3Q96AZ1 226 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 USMG5Q96IX5 58 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 HRH4Q9H3N8 390 aa8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 GAR1Q9NY12 217 aaKnown RBP8.44□□□□□ -1.06
HLA-DQA1-202ENST00000374949 TRBV7-1A0A0A6YYK4 115 aa8.43□□□□□ -1.06
HLA-DQA1-202ENST00000374949 A0A1W2PPV4 95 aa8.43□□□□□ -1.06
HLA-DQA1-202ENST00000374949 HBE1P02100 147 aa8.43□□□□□ -1.06
HLA-DQA1-202ENST00000374949 YPEL3P61236 119 aaPredicted RBP8.43□□□□□ -1.06
HLA-DQA1-202ENST00000374949 SLC35B1P78383 322 aa8.43□□□□□ -1.06
HLA-DQA1-202ENST00000374949 FAM122CQ6P4D5 195 aa8.43□□□□□ -1.06
HLA-DQA1-202ENST00000374949 OR1L4Q8NGR5 311 aa8.43□□□□□ -1.06
HLA-DQA1-202ENST00000374949 LYPD6BQ8NI32 183 aa8.43□□□□□ -1.06
HLA-DQA1-202ENST00000374949 ZNF502Q8TBZ5 544 aa8.43□□□□□ -1.06
HLA-DQA1-202ENST00000374949 SFT2D1Q8WV19 159 aa8.43□□□□□ -1.06
HLA-DQA1-202ENST00000374949 MARC2Q969Z3 335 aa8.43□□□□□ -1.06
HLA-DQA1-202ENST00000374949 ATP6V0BQ99437 205 aa8.43□□□□□ -1.06
HLA-DQA1-202ENST00000374949 DNAJC4Q9NNZ3 241 aa8.43□□□□□ -1.06
HLA-DQA1-202ENST00000374949 S4R3C0 116 aa8.43□□□□□ -1.06
HLA-DQA1-202ENST00000374949 TRAV1-1A0A0B4J248 108 aa8.42□□□□□ -1.06
HLA-DQA1-202ENST00000374949 A0A0G2JLM5 398 aa8.42□□□□□ -1.06
HLA-DQA1-202ENST00000374949 CTXND1A0A1B0GTU2 59 aa8.42□□□□□ -1.06
HLA-DQA1-202ENST00000374949 SEC14L6B5MCN3 397 aa8.42□□□□□ -1.06
HLA-DQA1-202ENST00000374949 IGKV1-17P01599 117 aa8.42□□□□□ -1.06
HLA-DQA1-202ENST00000374949 IGHV3-23P01764 117 aa8.42□□□□□ -1.06
HLA-DQA1-202ENST00000374949 IGHG4P01861 327 aa8.42□□□□□ -1.06
HLA-DQA1-202ENST00000374949 RD3LP0DJH9 198 aa8.42□□□□□ -1.06
HLA-DQA1-202ENST00000374949 RAB9AP51151 201 aa8.42□□□□□ -1.06
HLA-DQA1-202ENST00000374949 TPPP2P59282 170 aa8.42□□□□□ -1.06
HLA-DQA1-202ENST00000374949 RHOBP62745 196 aa8.42□□□□□ -1.06
HLA-DQA1-202ENST00000374949 ZNF726P1Q15940 193 aa8.42□□□□□ -1.06
HLA-DQA1-202ENST00000374949 GCSAMLQ5JQS6 135 aa8.42□□□□□ -1.06
HLA-DQA1-202ENST00000374949 COMMD7Q86VX2 200 aa8.42□□□□□ -1.06
HLA-DQA1-202ENST00000374949 COMMD1Q8N668 190 aa8.42□□□□□ -1.06
HLA-DQA1-202ENST00000374949 Q8WTZ3 238 aa8.42□□□□□ -1.06
HLA-DQA1-202ENST00000374949 RAB24Q969Q5 203 aa8.42□□□□□ -1.06
HLA-DQA1-202ENST00000374949 PFDN5Q99471 154 aa8.42□□□□□ -1.06
HLA-DQA1-202ENST00000374949 RNF2Q99496 336 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms