RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 SSX3Q99909 188 aa14.17□□□□□ -0.14
HLA-DQB1-201ENST00000374943 THYN1Q9P016 225 aa14.17□□□□□ -0.14
HLA-DQB1-201ENST00000374943 TRAV30A0A087WSZ9 112 aa14.17□□□□□ -0.14
HLA-DQB1-201ENST00000374943 A1L4Q6 167 aa14.17□□□□□ -0.14
HLA-DQB1-201ENST00000374943 H7BYZ3 331 aa14.17□□□□□ -0.14
HLA-DQB1-201ENST00000374943 GATA3P23771 443 aa14.17□□□□□ -0.14
HLA-DQB1-201ENST00000374943 CLEC12BQ2HXU8 276 aa14.17□□□□□ -0.14
HLA-DQB1-201ENST00000374943 HSPB9Q9BQS6 159 aa14.17□□□□□ -0.14
HLA-DQB1-201ENST00000374943 CRYBG3Q68DQ2 2970 aa14.16□□□□□ -0.14
HLA-DQB1-201ENST00000374943 TOMM40O96008 361 aa14.16□□□□□ -0.14
HLA-DQB1-201ENST00000374943 CXCL1P09341 107 aa14.16□□□□□ -0.14
HLA-DQB1-201ENST00000374943 PYYP10082 97 aa14.16□□□□□ -0.14
HLA-DQB1-201ENST00000374943 KLF17Q5JT82 389 aaPredicted RBP14.16□□□□□ -0.14
HLA-DQB1-201ENST00000374943 FAM110DQ8TAY7 271 aaPredicted RBP14.16□□□□□ -0.14
HLA-DQB1-201ENST00000374943 C2CD4CQ8TF44 421 aa14.16□□□□□ -0.14
HLA-DQB1-201ENST00000374943 TCEAL7Q9BRU2 100 aa14.16□□□□□ -0.14
HLA-DQB1-201ENST00000374943 HIGD1AQ9Y241 93 aa14.16□□□□□ -0.14
HLA-DQB1-201ENST00000374943 URGCP-MRPS24S4R325 110 aa14.16□□□□□ -0.14
HLA-DQB1-201ENST00000374943 TRBV24-1A0A075B6N3 115 aa14.15□□□□□ -0.14
HLA-DQB1-201ENST00000374943 A0A096LNT2 108 aa14.15□□□□□ -0.14
HLA-DQB1-201ENST00000374943 TRAV20A0A0B4J274 112 aa14.15□□□□□ -0.14
HLA-DQB1-201ENST00000374943 RD3LP0DJH9 198 aa14.15□□□□□ -0.14
HLA-DQB1-201ENST00000374943 HIST1H1BP16401 226 aaKnown RBP14.15□□□□□ -0.14
HLA-DQB1-201ENST00000374943 MFAP4P55083 255 aa14.15□□□□□ -0.14
HLA-DQB1-201ENST00000374943 YPEL3P61236 119 aaPredicted RBP14.15□□□□□ -0.14
HLA-DQB1-201ENST00000374943 C5orf56Q8N8D9 126 aa14.15□□□□□ -0.14
HLA-DQB1-201ENST00000374943 TMEM68Q96MH6 324 aa14.15□□□□□ -0.14
HLA-DQB1-201ENST00000374943 PSMG3-AS1Q96PY0 264 aa14.15□□□□□ -0.14
HLA-DQB1-201ENST00000374943 MRPL27Q9P0M9 148 aaKnown RBP14.15□□□□□ -0.14
HLA-DQB1-201ENST00000374943 TGIF2-C20orf24A0A0A6YYL0 155 aa14.14□□□□□ -0.15
HLA-DQB1-201ENST00000374943 PPP1R2P9O14990 202 aa14.14□□□□□ -0.15
HLA-DQB1-201ENST00000374943 PFN1P07737 140 aaKnown RBP14.14□□□□□ -0.15
HLA-DQB1-201ENST00000374943 FCGR2BP31994 310 aaPredicted RBP14.14□□□□□ -0.15
HLA-DQB1-201ENST00000374943 RPL35P42766 123 aaKnown RBP14.14□□□□□ -0.15
HLA-DQB1-201ENST00000374943 PIFOQ8TCI5 191 aa14.14□□□□□ -0.15
HLA-DQB1-201ENST00000374943 C7orf69Q9H7B7 122 aa14.14□□□□□ -0.15
HLA-DQB1-201ENST00000374943 MOB4Q9Y3A3 225 aa14.14□□□□□ -0.15
HLA-DQB1-201ENST00000374943 VPS13CQ709C8 3753 aa14.14□□□□□ -0.15
HLA-DQB1-201ENST00000374943 IGHV3OR16-10A0A075B7F0 116 aa14.14□□□□□ -0.15
HLA-DQB1-201ENST00000374943 IGHV4-38-2P0DP08 117 aa14.14□□□□□ -0.15
HLA-DQB1-201ENST00000374943 GP9P14770 177 aa14.14□□□□□ -0.15
HLA-DQB1-201ENST00000374943 CRYBB3P26998 211 aa14.14□□□□□ -0.15
HLA-DQB1-201ENST00000374943 LYZP61626 148 aa14.14□□□□□ -0.15
HLA-DQB1-201ENST00000374943 SUMO1P63165 101 aaKnown RBP14.14□□□□□ -0.15
HLA-DQB1-201ENST00000374943 BRD3OSQ6XYD6 125 aa14.14□□□□□ -0.15
HLA-DQB1-201ENST00000374943 ELOVL1Q9BW60 279 aa14.14□□□□□ -0.15
HLA-DQB1-201ENST00000374943 C21orf62Q9NYP8 219 aa14.14□□□□□ -0.15
HLA-DQB1-201ENST00000374943 TMEM14CQ9P0S9 112 aa14.14□□□□□ -0.15
HLA-DQB1-201ENST00000374943 A0A0U1RQK1 487 aa14.13□□□□□ -0.15
HLA-DQB1-201ENST00000374943 F8W735 103 aaPredicted RBP14.13□□□□□ -0.15
HLA-DQB1-201ENST00000374943 ATP6V0E1O15342 81 aa14.13□□□□□ -0.15
HLA-DQB1-201ENST00000374943 GNG7O60262 68 aa14.13□□□□□ -0.15
HLA-DQB1-201ENST00000374943 MYCNOSP40205 109 aa14.13□□□□□ -0.15
HLA-DQB1-201ENST00000374943 OR5B12Q96R08 314 aa14.13□□□□□ -0.15
HLA-DQB1-201ENST00000374943 TXN2Q99757 166 aa14.13□□□□□ -0.15
HLA-DQB1-201ENST00000374943 PYGO2Q9BRQ0 406 aa14.13□□□□□ -0.15
HLA-DQB1-201ENST00000374943 WI2-2373I1.2A0A1W2PRP0 233 aa14.12□□□□□ -0.15
HLA-DQB1-201ENST00000374943 HELTA6NFD8 242 aa14.12□□□□□ -0.15
HLA-DQB1-201ENST00000374943 PGPEP1LA6NFU8 196 aa14.12□□□□□ -0.15
HLA-DQB1-201ENST00000374943 TGOLN2O43493 480 aa14.12□□□□□ -0.15
HLA-DQB1-201ENST00000374943 NDUFB8O95169 186 aa14.12□□□□□ -0.15
HLA-DQB1-201ENST00000374943 SRP14P37108 136 aaKnown RBP14.12□□□□□ -0.15
HLA-DQB1-201ENST00000374943 RPS10P46783 165 aaKnown RBP14.12□□□□□ -0.15
HLA-DQB1-201ENST00000374943 GALR1P47211 349 aa14.12□□□□□ -0.15
HLA-DQB1-201ENST00000374943 ZNF329Q86UD4 541 aa14.12□□□□□ -0.15
HLA-DQB1-201ENST00000374943 ZFP82Q8N141 532 aa14.12□□□□□ -0.15
HLA-DQB1-201ENST00000374943 OR5T1Q8NG75 326 aa14.12□□□□□ -0.15
HLA-DQB1-201ENST00000374943 OCC1Q8TAD7 63 aa14.12□□□□□ -0.15
HLA-DQB1-201ENST00000374943 VN1R17PQ8TDU5 208 aa14.12□□□□□ -0.15
HLA-DQB1-201ENST00000374943 FAM210BQ96KR6 192 aa14.12□□□□□ -0.15
HLA-DQB1-201ENST00000374943 SLC25A39Q9BZJ4 359 aaPredicted RBP14.12□□□□□ -0.15
HLA-DQB1-201ENST00000374943 BIN3Q9NQY0 253 aa14.12□□□□□ -0.15
HLA-DQB1-201ENST00000374943 HIF1ANQ9NWT6 349 aa14.12□□□□□ -0.15
HLA-DQB1-201ENST00000374943 USP9YO00507 2555 aaPredicted RBP14.12□□□□□ -0.15
HLA-DQB1-201ENST00000374943 S100PP25815 95 aa14.11□□□□□ -0.15
HLA-DQB1-201ENST00000374943 CRIP2P52943 208 aaPredicted RBP14.11□□□□□ -0.15
HLA-DQB1-201ENST00000374943 HIST2H2BCQ6DN03 193 aa14.11□□□□□ -0.15
HLA-DQB1-201ENST00000374943 UNQ5815/PRO19632Q6UWF5 114 aa14.11□□□□□ -0.15
HLA-DQB1-201ENST00000374943 ZNF491Q8N8L2 437 aa14.11□□□□□ -0.15
HLA-DQB1-201ENST00000374943 LINC01356Q8N9X3 169 aa14.11□□□□□ -0.15
HLA-DQB1-201ENST00000374943 SFRP2Q96HF1 295 aa14.11□□□□□ -0.15
HLA-DQB1-201ENST00000374943 IMMP2LQ96T52 175 aa14.11□□□□□ -0.15
HLA-DQB1-201ENST00000374943 BEX4Q9NWD9 120 aaPredicted RBP14.11□□□□□ -0.15
HLA-DQB1-201ENST00000374943 FBN2P35556 2912 aa14.11□□□□□ -0.15
HLA-DQB1-201ENST00000374943 MDFIC2A0A1B0GVS7 189 aa14.1□□□□□ -0.15
HLA-DQB1-201ENST00000374943 SCGB2A1O75556 95 aa14.1□□□□□ -0.15
HLA-DQB1-201ENST00000374943 OR2J3O76001 311 aa14.1□□□□□ -0.15
HLA-DQB1-201ENST00000374943 TMEM190Q8WZ59 177 aa14.1□□□□□ -0.15
HLA-DQB1-201ENST00000374943 RNF125Q96EQ8 232 aa14.1□□□□□ -0.15
HLA-DQB1-201ENST00000374943 SHANK2-AS3Q9BTD1 123 aa14.1□□□□□ -0.15
HLA-DQB1-201ENST00000374943 TMUB1Q9BVT8 246 aa14.1□□□□□ -0.15
HLA-DQB1-201ENST00000374943 NBPF19A0A087WUL8 3843 aa14.1□□□□□ -0.15
HLA-DQB1-201ENST00000374943 CELSR2Q9HCU4 2923 aa14.1□□□□□ -0.15
HLA-DQB1-201ENST00000374943 CR1P17927 2039 aa14.1□□□□□ -0.15
HLA-DQB1-201ENST00000374943 TRBV9A0A0B4J1U6 114 aa14.1□□□□□ -0.15
HLA-DQB1-201ENST00000374943 H3BRN7 92 aa14.1□□□□□ -0.15
HLA-DQB1-201ENST00000374943 NBEAP1P0C6P0 100 aa14.1□□□□□ -0.15
HLA-DQB1-201ENST00000374943 GNG4P50150 75 aa14.1□□□□□ -0.15
HLA-DQB1-201ENST00000374943 CENPWQ5EE01 88 aa14.1□□□□□ -0.15
HLA-DQB1-201ENST00000374943 TEX38Q6PEX7 206 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms