RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 LAMTOR3Q9UHA4 124 aa9.5□□□□□ -0.89
VCL-202ENST00000372755 LINC00527Q9UJ94 153 aa9.5□□□□□ -0.89
VCL-202ENST00000372755 THSD7AQ9UPZ6 1657 aa9.5□□□□□ -0.89
VCL-202ENST00000372755 B4DSR2 109 aa9.5□□□□□ -0.89
VCL-202ENST00000372755 PSG1P11464 419 aa9.5□□□□□ -0.89
VCL-202ENST00000372755 SRSF4Q08170 494 aaKnown RBP9.5□□□□□ -0.89
VCL-202ENST00000372755 PAQR4Q8N4S7 273 aaPredicted RBP9.5□□□□□ -0.89
VCL-202ENST00000372755 RGPD3A6NKT7 1758 aaPredicted RBP9.5□□□□□ -0.89
VCL-202ENST00000372755 ATG2BQ96BY7 2078 aa9.5□□□□□ -0.89
VCL-202ENST00000372755 VCYO14598 125 aa9.5□□□□□ -0.89
VCL-202ENST00000372755 RPL15P61313 204 aaKnown RBP9.5□□□□□ -0.89
VCL-202ENST00000372755 VSIRQ9H7M9 311 aa9.5□□□□□ -0.89
VCL-202ENST00000372755 ANKRD31Q8N7Z5 1873 aa9.5□□□□□ -0.89
VCL-202ENST00000372755 D6R8Y8 96 aa9.5□□□□□ -0.89
VCL-202ENST00000372755 M0R1W7 72 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 PSCAO43653 123 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 USMG5Q96IX5 58 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 TMEM178BH3BS89 294 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 INSP01308 110 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 TCRAP04437 139 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 LYZL1Q6UWQ5 148 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 TRBV24-1A0A075B6N3 115 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 A0A1B0GW64 132 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 UBE2CO00762 179 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 ERCC8Q13216 396 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 GAGE2EQ4V326 116 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 SCRT1Q9BWW7 348 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 GAGE2DQ9UEU5 116 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 TRAV1-1A0A0B4J248 108 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 J3QRE1 110 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 NTN3O00634 580 aaPredicted RBP9.49□□□□□ -0.89
VCL-202ENST00000372755 LY6DQ14210 128 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 ZNF562Q6V9R5 426 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 FLVCR1-AS1Q8TAF5 88 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 ZNF319Q9P2F9 582 aa9.49□□□□□ -0.89
VCL-202ENST00000372755 FAM223BA6NKX1 122 aa9.48□□□□□ -0.89
VCL-202ENST00000372755 FAM223AQ8IWN6 122 aa9.48□□□□□ -0.89
VCL-202ENST00000372755 FGFBP3Q8TAT2 258 aa9.48□□□□□ -0.89
VCL-202ENST00000372755 RNF166Q96A37 237 aaPredicted RBP9.48□□□□□ -0.89
VCL-202ENST00000372755 IGHV3-73A0A0B4J1V6 119 aa9.48□□□□□ -0.89
VCL-202ENST00000372755 SRRM4A7MD48 611 aaKnown RBP9.48□□□□□ -0.89
VCL-202ENST00000372755 DNAJC13O75165 2243 aa9.48□□□□□ -0.89
VCL-202ENST00000372755 NCR2O95944 276 aa9.48□□□□□ -0.89
VCL-202ENST00000372755 DOCK5Q9H7D0 1870 aa9.48□□□□□ -0.89
VCL-202ENST00000372755 IGKV1D-8A0A087WSZ0 117 aa9.48□□□□□ -0.89
VCL-202ENST00000372755 TNFSF13O75888 250 aa9.48□□□□□ -0.89
VCL-202ENST00000372755 FOXF2Q12947 444 aa9.48□□□□□ -0.89
VCL-202ENST00000372755 TMEM219Q86XT9 240 aa9.48□□□□□ -0.89
VCL-202ENST00000372755 EXOC3-AS1Q8N2X6 119 aa9.48□□□□□ -0.89
VCL-202ENST00000372755 VWC2LB2RUY7 222 aa9.48□□□□□ -0.89
VCL-202ENST00000372755 HIST1H4AP62805 103 aaKnown RBP9.48□□□□□ -0.89
VCL-202ENST00000372755 LSM4Q9Y4Z0 139 aaKnown RBP9.48□□□□□ -0.89
VCL-202ENST00000372755 TNS1Q9HBL0 1735 aaKnown RBP9.47□□□□□ -0.89
VCL-202ENST00000372755 IGKV1-12A0A0C4DH73 117 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 LOC105371267A0A1B0GV96 52 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 LEPROTO15243 131 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 IGKV1D-12P01611 117 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 GAGE2BQ13066 116 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 HIST1H2BLQ99880 126 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 LY96Q9Y6Y9 160 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 SH2D1AO60880 128 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 NPC2P61916 151 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 C6orf226Q5I0X4 101 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 C10orf55Q5SWW7 151 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 SPATA31B1PQ5VZV4 182 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 LYPD1Q8N2G4 141 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 RPRMLQ8N4K4 120 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 ADAMTS7Q9UKP4 1686 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 TMEM155Q4W5P6 130 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 UBR3Q6ZT12 1888 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 TRIP12Q14669 1992 aaPredicted RBP9.47□□□□□ -0.89
VCL-202ENST00000372755 PSG3Q16557 428 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 ACTL10Q5JWF8 245 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 KNTC1P50748 2209 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 MYMXA0A1B0GTQ4 84 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 C5orf64Q2M2E5 130 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 DNAJC30Q96LL9 226 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 MGST2Q99735 147 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 COL4A5P29400 1685 aa9.47□□□□□ -0.89
VCL-202ENST00000372755 H3BUX3 64 aa9.46□□□□□ -0.89
VCL-202ENST00000372755 KLRD1Q13241 179 aa9.46□□□□□ -0.89
VCL-202ENST00000372755 KLF17Q5JT82 389 aaPredicted RBP9.46□□□□□ -0.89
VCL-202ENST00000372755 ZFAND6Q6FIF0 208 aa9.46□□□□□ -0.89
VCL-202ENST00000372755 GGNQ86UU5 652 aa9.46□□□□□ -0.89
VCL-202ENST00000372755 CCDC88CQ9P219 2028 aa9.46□□□□□ -0.89
VCL-202ENST00000372755 ITGB1BP1O14713 200 aa9.46□□□□□ -0.89
VCL-202ENST00000372755 RPL35AP18077 110 aaKnown RBP9.46□□□□□ -0.89
VCL-202ENST00000372755 DEFB121Q5J5C9 76 aa9.46□□□□□ -0.89
VCL-202ENST00000372755 NABP1Q96AH0 204 aa9.46□□□□□ -0.89
VCL-202ENST00000372755 SS18Q15532 418 aa9.46□□□□□ -0.9
VCL-202ENST00000372755 ZNF362Q5T0B9 420 aaPredicted RBP9.46□□□□□ -0.9
VCL-202ENST00000372755 ZNF474Q6S9Z5 364 aaPredicted RBP9.46□□□□□ -0.9
VCL-202ENST00000372755 PIP4P2Q8N4L2 257 aa9.46□□□□□ -0.9
VCL-202ENST00000372755 SCN4AP35499 1836 aa9.46□□□□□ -0.9
VCL-202ENST00000372755 ARFGEF1Q9Y6D6 1849 aa9.46□□□□□ -0.9
VCL-202ENST00000372755 H0YJW9 148 aa9.46□□□□□ -0.9
VCL-202ENST00000372755 CD59P13987 128 aa9.46□□□□□ -0.9
VCL-202ENST00000372755 LHFPL4Q7Z7J7 247 aa9.46□□□□□ -0.9
VCL-202ENST00000372755 BCL6BQ8N143 479 aaPredicted RBP9.46□□□□□ -0.9
VCL-202ENST00000372755 CD177Q8N6Q3 437 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms