RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 CXCL1P09341 107 aa11.73□□□□□ -0.53
RAPGEF1-202ENST00000372190 IGKV1D-42A0A075B6H8 117 aa11.73□□□□□ -0.53
RAPGEF1-202ENST00000372190 PTGDSP41222 190 aa11.73□□□□□ -0.53
RAPGEF1-202ENST00000372190 IGHV1-2P23083 117 aa11.73□□□□□ -0.53
RAPGEF1-202ENST00000372190 AMN1Q8IY45 258 aa11.73□□□□□ -0.53
RAPGEF1-202ENST00000372190 ABHD12Q8N2K0 398 aa11.73□□□□□ -0.53
RAPGEF1-202ENST00000372190 C15orf53Q8NAA6 179 aa11.73□□□□□ -0.53
RAPGEF1-202ENST00000372190 CSTL1Q9H114 145 aa11.73□□□□□ -0.53
RAPGEF1-202ENST00000372190 CLPSL1A2RUU4 121 aa11.72□□□□□ -0.53
RAPGEF1-202ENST00000372190 BAALCQ8WXS3 180 aa11.72□□□□□ -0.53
RAPGEF1-202ENST00000372190 INS-IGF2F8WCM5 200 aa11.72□□□□□ -0.53
RAPGEF1-202ENST00000372190 INSP01308 110 aa11.72□□□□□ -0.53
RAPGEF1-202ENST00000372190 SYS1-DBNDD2H3BUS1 97 aa11.72□□□□□ -0.53
RAPGEF1-202ENST00000372190 SLC25A53Q5H9E4 307 aa11.72□□□□□ -0.53
RAPGEF1-202ENST00000372190 J3QW42 95 aa11.72□□□□□ -0.53
RAPGEF1-202ENST00000372190 ASCL2Q99929 193 aa11.72□□□□□ -0.53
RAPGEF1-202ENST00000372190 SRSF3P84103 164 aaKnown RBP11.72□□□□□ -0.53
RAPGEF1-202ENST00000372190 ATP5G2Q06055 141 aa11.72□□□□□ -0.53
RAPGEF1-202ENST00000372190 RPRMLQ8N4K4 120 aa11.72□□□□□ -0.53
RAPGEF1-202ENST00000372190 OR9G1Q8NH87 305 aa11.72□□□□□ -0.53
RAPGEF1-202ENST00000372190 WFDC12Q8WWY7 111 aa11.72□□□□□ -0.53
RAPGEF1-202ENST00000372190 EGR4Q05215 589 aa11.71□□□□□ -0.53
RAPGEF1-202ENST00000372190 RASL10AQ92737 203 aa11.71□□□□□ -0.53
RAPGEF1-202ENST00000372190 MAP1BP46821 2468 aaKnown RBP11.71□□□□□ -0.53
RAPGEF1-202ENST00000372190 A0A1W2PPI3 338 aa11.71□□□□□ -0.53
RAPGEF1-202ENST00000372190 OR13A1Q8NGR1 328 aa11.71□□□□□ -0.53
RAPGEF1-202ENST00000372190 FOXA2Q9Y261 457 aaPredicted RBP11.71□□□□□ -0.53
RAPGEF1-202ENST00000372190 TSKUQ8WUA8 353 aa11.71□□□□□ -0.54
RAPGEF1-202ENST00000372190 MSGN1A6NI15 193 aa11.71□□□□□ -0.54
RAPGEF1-202ENST00000372190 FABP5P3A8MUU1 101 aa11.71□□□□□ -0.54
RAPGEF1-202ENST00000372190 FLVCR1-AS1Q8TAF5 88 aa11.71□□□□□ -0.54
RAPGEF1-202ENST00000372190 CLEC7AQ9BXN2 247 aa11.71□□□□□ -0.54
RAPGEF1-202ENST00000372190 OTORQ9NRC9 128 aa11.71□□□□□ -0.54
RAPGEF1-202ENST00000372190 IGHV2OR16-5A0A0B4J2B6 119 aa11.7□□□□□ -0.54
RAPGEF1-202ENST00000372190 PRB4P10163 310 aaPredicted RBP11.7□□□□□ -0.54
RAPGEF1-202ENST00000372190 CRYBA4P53673 196 aa11.7□□□□□ -0.54
RAPGEF1-202ENST00000372190 TCF15Q12870 199 aa11.7□□□□□ -0.54
RAPGEF1-202ENST00000372190 NEGR1Q7Z3B1 354 aa11.7□□□□□ -0.54
RAPGEF1-202ENST00000372190 EEF1AKMT3Q96AZ1 226 aa11.7□□□□□ -0.54
RAPGEF1-202ENST00000372190 PRSS33Q8NF86 280 aa11.7□□□□□ -0.54
RAPGEF1-202ENST00000372190 SCRT1Q9BWW7 348 aa11.7□□□□□ -0.54
RAPGEF1-202ENST00000372190 CALYQ9NYX4 217 aa11.7□□□□□ -0.54
RAPGEF1-202ENST00000372190 MRPL27Q9P0M9 148 aaKnown RBP11.7□□□□□ -0.54
RAPGEF1-202ENST00000372190 SPRR3Q9UBC9 169 aa11.7□□□□□ -0.54
RAPGEF1-202ENST00000372190 COL4A6Q14031 1691 aa11.7□□□□□ -0.54
RAPGEF1-202ENST00000372190 Q96M66 194 aa11.7□□□□□ -0.54
RAPGEF1-202ENST00000372190 Q9H3A6 140 aa11.7□□□□□ -0.54
RAPGEF1-202ENST00000372190 DEPPQ9NTK1 212 aa11.7□□□□□ -0.54
RAPGEF1-202ENST00000372190 PCM1Q15154 2024 aa11.7□□□□□ -0.54
RAPGEF1-202ENST00000372190 RNF222A6NCQ9 220 aa11.69□□□□□ -0.54
RAPGEF1-202ENST00000372190 SAXO1Q8IYX7 474 aa11.69□□□□□ -0.54
RAPGEF1-202ENST00000372190 DUX3Q96PT4 197 aa11.69□□□□□ -0.54
RAPGEF1-202ENST00000372190 IGHG4P01861 327 aa11.69□□□□□ -0.54
RAPGEF1-202ENST00000372190 TFF3Q07654 80 aa11.69□□□□□ -0.54
RAPGEF1-202ENST00000372190 DMRTC2Q8IXT2 367 aaPredicted RBP11.69□□□□□ -0.54
RAPGEF1-202ENST00000372190 C7orf69Q9H7B7 122 aa11.69□□□□□ -0.54
RAPGEF1-202ENST00000372190 FGF16O43320 207 aa11.69□□□□□ -0.54
RAPGEF1-202ENST00000372190 NBL1P41271 181 aa11.69□□□□□ -0.54
RAPGEF1-202ENST00000372190 CACNA1CQ13936 2221 aa11.69□□□□□ -0.54
RAPGEF1-202ENST00000372190 MYMXA0A1B0GTQ4 84 aa11.69□□□□□ -0.54
RAPGEF1-202ENST00000372190 IL18BPO95998 194 aa11.69□□□□□ -0.54
RAPGEF1-202ENST00000372190 FNDC10F2Z333 226 aa11.68□□□□□ -0.54
RAPGEF1-202ENST00000372190 LCN12Q6JVE5 192 aa11.68□□□□□ -0.54
RAPGEF1-202ENST00000372190 CHD5Q8TDI0 1954 aa11.68□□□□□ -0.54
RAPGEF1-202ENST00000372190 FNDC1Q4ZHG4 1894 aaPredicted RBP11.68□□□□□ -0.54
RAPGEF1-202ENST00000372190 IFI27L2Q9H2X8 130 aa11.68□□□□□ -0.54
RAPGEF1-202ENST00000372190 ADARB2-AS1A8MUL3 147 aa11.68□□□□□ -0.54
RAPGEF1-202ENST00000372190 TMEM14DPA8MWL7 114 aa11.68□□□□□ -0.54
RAPGEF1-202ENST00000372190 F2Z2F3 143 aa11.68□□□□□ -0.54
RAPGEF1-202ENST00000372190 MPZP25189 248 aa11.68□□□□□ -0.54
RAPGEF1-202ENST00000372190 POLR3KQ9Y2Y1 108 aaPredicted RBP11.68□□□□□ -0.54
RAPGEF1-202ENST00000372190 PINLYPA6NC86 204 aa11.68□□□□□ -0.54
RAPGEF1-202ENST00000372190 LINC01590Q5TEZ4 76 aa11.68□□□□□ -0.54
RAPGEF1-202ENST00000372190 TCF20Q9UGU0 1960 aaKnown RBP11.68□□□□□ -0.54
RAPGEF1-202ENST00000372190 NPIPB13A6NJU9 1138 aa11.68□□□□□ -0.54
RAPGEF1-202ENST00000372190 NPIPB5A8MRT5 1133 aa11.68□□□□□ -0.54
RAPGEF1-202ENST00000372190 A0A1W2PPM0 123 aa11.67□□□□□ -0.54
RAPGEF1-202ENST00000372190 ATOX1O00244 68 aa11.67□□□□□ -0.54
RAPGEF1-202ENST00000372190 IGHG3P01860 377 aa11.67□□□□□ -0.54
RAPGEF1-202ENST00000372190 EGR2P11161 476 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF1-202ENST00000372190 C17orf82Q86X59 251 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF1-202ENST00000372190 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF1-202ENST00000372190 WFDC9Q8NEX5 89 aa11.67□□□□□ -0.54
RAPGEF1-202ENST00000372190 IGHV2-70P01814 119 aa11.67□□□□□ -0.54
RAPGEF1-202ENST00000372190 RNASE4P34096 147 aaKnown RBP11.67□□□□□ -0.54
RAPGEF1-202ENST00000372190 IGKV3-20P01619 116 aa11.67□□□□□ -0.54
RAPGEF1-202ENST00000372190 HERV-K104P63124 156 aa11.67□□□□□ -0.54
RAPGEF1-202ENST00000372190 MRPL23Q16540 153 aaKnown RBP11.67□□□□□ -0.54
RAPGEF1-202ENST00000372190 GPHA2Q96T91 129 aa11.67□□□□□ -0.54
RAPGEF1-202ENST00000372190 DLL3Q9NYJ7 618 aa11.67□□□□□ -0.54
RAPGEF1-202ENST00000372190 MIR17HGQ75NE6 70 aa11.66□□□□□ -0.54
RAPGEF1-202ENST00000372190 TMEM256Q8N2U0 113 aa11.66□□□□□ -0.54
RAPGEF1-202ENST00000372190 SHISA3A0PJX4 238 aa11.66□□□□□ -0.54
RAPGEF1-202ENST00000372190 OCC1Q8TAD7 63 aa11.66□□□□□ -0.54
RAPGEF1-202ENST00000372190 DPH3P1Q9H4G8 78 aa11.66□□□□□ -0.54
RAPGEF1-202ENST00000372190 LSM4Q9Y4Z0 139 aaKnown RBP11.66□□□□□ -0.54
RAPGEF1-202ENST00000372190 TMEM30BQ3MIR4 351 aa11.66□□□□□ -0.54
RAPGEF1-202ENST00000372190 JPT1Q9UK76 154 aa11.66□□□□□ -0.54
RAPGEF1-202ENST00000372190 ZDBF2Q9HCK1 2354 aa11.66□□□□□ -0.54
RAPGEF1-202ENST00000372190 REG1AP05451 166 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms