RNA–Protein interactions for RNA: ENST00000369452.8

SHOC2-202, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOC2, Length 3,943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-202ENST00000369452 ARPC1AQ92747 370 aa10.22□□□□□ -0.77
SHOC2-202ENST00000369452 PFN1P07737 140 aaKnown RBP10.22□□□□□ -0.77
SHOC2-202ENST00000369452 RPL35P42766 123 aaKnown RBP10.22□□□□□ -0.77
SHOC2-202ENST00000369452 ATP5IP56385 69 aaPredicted RBP10.22□□□□□ -0.77
SHOC2-202ENST00000369452 C1QL4Q86Z23 238 aa10.22□□□□□ -0.77
SHOC2-202ENST00000369452 C22orf15Q8WYQ4 148 aa10.22□□□□□ -0.77
SHOC2-202ENST00000369452 PIMREGQ9BSJ6 248 aa10.22□□□□□ -0.77
SHOC2-202ENST00000369452 IGHV3-35A0A0C4DH35 117 aa10.21□□□□□ -0.77
SHOC2-202ENST00000369452 GP9P14770 177 aa10.21□□□□□ -0.77
SHOC2-202ENST00000369452 MYCNOSP40205 109 aa10.21□□□□□ -0.77
SHOC2-202ENST00000369452 IFNA1P01562 189 aa10.21□□□□□ -0.78
SHOC2-202ENST00000369452 MT-ND4LP03901 98 aa10.21□□□□□ -0.78
SHOC2-202ENST00000369452 C10orf113Q5VZT2 155 aa10.21□□□□□ -0.78
SHOC2-202ENST00000369452 TRGV9Q99603 122 aa10.21□□□□□ -0.78
SHOC2-202ENST00000369452 CHRDL1Q9BU40 450 aa10.21□□□□□ -0.78
SHOC2-202ENST00000369452 UNC79Q9P2D8 2635 aa10.21□□□□□ -0.78
SHOC2-202ENST00000369452 C8orf88P0DMB2 117 aa10.21□□□□□ -0.78
SHOC2-202ENST00000369452 USF2Q15853 346 aaPredicted RBP10.21□□□□□ -0.78
SHOC2-202ENST00000369452 TRAV34A0A0B4J273 112 aa10.2□□□□□ -0.78
SHOC2-202ENST00000369452 ADMP35318 185 aa10.2□□□□□ -0.78
SHOC2-202ENST00000369452 SUMO1P63165 101 aaKnown RBP10.2□□□□□ -0.78
SHOC2-202ENST00000369452 RAB31Q13636 194 aa10.2□□□□□ -0.78
SHOC2-202ENST00000369452 TTC9CQ8N5M4 171 aa10.2□□□□□ -0.78
SHOC2-202ENST00000369452 C5orf56Q8N8D9 126 aa10.2□□□□□ -0.78
SHOC2-202ENST00000369452 IFITM10A6NMD0 228 aa10.2□□□□□ -0.78
SHOC2-202ENST00000369452 OR2J3O76001 311 aa10.2□□□□□ -0.78
SHOC2-202ENST00000369452 SUB1P53999 127 aaKnown RBP eCLIP10.2□□□□□ -0.78
SHOC2-202ENST00000369452 FAM3BP58499 235 aaPredicted RBP10.2□□□□□ -0.78
SHOC2-202ENST00000369452 TBL2Q9Y4P3 447 aaKnown RBP10.2□□□□□ -0.78
SHOC2-202ENST00000369452 IGHV1-69DA0A0B4J2H0 117 aa10.2□□□□□ -0.78
SHOC2-202ENST00000369452 IGHV1-69P01742 117 aa10.2□□□□□ -0.78
SHOC2-202ENST00000369452 C11orf52Q96A22 123 aa10.2□□□□□ -0.78
SHOC2-202ENST00000369452 IGF2BP2-AS1Q96M15 143 aa10.2□□□□□ -0.78
SHOC2-202ENST00000369452 RBM14Q96PK6 669 aaKnown RBP10.2□□□□□ -0.78
SHOC2-202ENST00000369452 SAV1Q9H4B6 383 aaPredicted RBP10.2□□□□□ -0.78
SHOC2-202ENST00000369452 SLC17A3O00476 420 aa10.19□□□□□ -0.78
SHOC2-202ENST00000369452 COX7A2P2O60397 106 aa10.19□□□□□ -0.78
SHOC2-202ENST00000369452 ZNF329Q86UD4 541 aa10.19□□□□□ -0.78
SHOC2-202ENST00000369452 TECRQ9NZ01 308 aaKnown RBP10.19□□□□□ -0.78
SHOC2-202ENST00000369452 CCDC168Q8NDH2 2452 aa10.19□□□□□ -0.78
SHOC2-202ENST00000369452 SNRPEP62304 92 aaKnown RBP10.19□□□□□ -0.78
SHOC2-202ENST00000369452 ZNF491Q8N8L2 437 aa10.19□□□□□ -0.78
SHOC2-202ENST00000369452 BLNKQ8WV28 456 aa10.19□□□□□ -0.78
SHOC2-202ENST00000369452 PDE6DO43924 150 aa10.19□□□□□ -0.78
SHOC2-202ENST00000369452 TRGC2P03986 189 aa10.19□□□□□ -0.78
SHOC2-202ENST00000369452 HIF1ANQ9NWT6 349 aa10.19□□□□□ -0.78
SHOC2-202ENST00000369452 ZNF586Q9NXT0 402 aa10.19□□□□□ -0.78
SHOC2-202ENST00000369452 MRPL27Q9P0M9 148 aaKnown RBP10.19□□□□□ -0.78
SHOC2-202ENST00000369452 OR2T8A6NH00 312 aa10.18□□□□□ -0.78
SHOC2-202ENST00000369452 MRPS12O15235 138 aaKnown RBP10.18□□□□□ -0.78
SHOC2-202ENST00000369452 CLEC2AQ6UVW9 174 aa10.18□□□□□ -0.78
SHOC2-202ENST00000369452 ZNF785A8K8V0 405 aa10.18□□□□□ -0.78
SHOC2-202ENST00000369452 NPIPB5A8MRT5 1133 aa10.18□□□□□ -0.78
SHOC2-202ENST00000369452 CLN5O75503 358 aa10.18□□□□□ -0.78
SHOC2-202ENST00000369452 UBE2L3P68036 154 aaKnown RBP10.18□□□□□ -0.78
SHOC2-202ENST00000369452 LY6EQ16553 131 aa10.18□□□□□ -0.78
SHOC2-202ENST00000369452 GFI1BQ5VTD9 330 aa10.18□□□□□ -0.78
SHOC2-202ENST00000369452 SONP18583 2426 aaKnown RBP10.18□□□□□ -0.78
SHOC2-202ENST00000369452 MSMBP08118 114 aa10.18□□□□□ -0.78
SHOC2-202ENST00000369452 LYZP61626 148 aa10.18□□□□□ -0.78
SHOC2-202ENST00000369452 BLCAPP62952 87 aa10.18□□□□□ -0.78
SHOC2-202ENST00000369452 ECSCRQ19T08 205 aa10.18□□□□□ -0.78
SHOC2-202ENST00000369452 C19orf54Q5BKX5 351 aa10.18□□□□□ -0.78
SHOC2-202ENST00000369452 LCNL1Q6ZST4 164 aa10.18□□□□□ -0.78
SHOC2-202ENST00000369452 OR51M1Q9H341 326 aa10.18□□□□□ -0.78
SHOC2-202ENST00000369452 ACANP16112 2415 aa10.18□□□□□ -0.78
SHOC2-202ENST00000369452 CTSGP08311 255 aa10.17□□□□□ -0.78
SHOC2-202ENST00000369452 PRR31Q5SQ13 230 aa10.17□□□□□ -0.78
SHOC2-202ENST00000369452 LINC00322Q6ZN03 302 aaPredicted RBP10.17□□□□□ -0.78
SHOC2-202ENST00000369452 SLC25A39Q9BZJ4 359 aaPredicted RBP10.17□□□□□ -0.78
SHOC2-202ENST00000369452 RNASE7Q9H1E1 156 aaKnown RBP10.17□□□□□ -0.78
SHOC2-202ENST00000369452 C7orf69Q9H7B7 122 aa10.17□□□□□ -0.78
SHOC2-202ENST00000369452 MLXQ9UH92 298 aa10.17□□□□□ -0.78
SHOC2-202ENST00000369452 HLA-DRB1P01911 266 aa10.17□□□□□ -0.78
SHOC2-202ENST00000369452 PAX1P15863 534 aa10.17□□□□□ -0.78
SHOC2-202ENST00000369452 RANP62826 216 aaKnown RBP10.17□□□□□ -0.78
SHOC2-202ENST00000369452 PNRC1Q12796 327 aaPredicted RBP10.17□□□□□ -0.78
SHOC2-202ENST00000369452 CCDC144NLQ6NUI1 221 aa10.17□□□□□ -0.78
SHOC2-202ENST00000369452 CCDC140Q96MF4 163 aa10.17□□□□□ -0.78
SHOC2-202ENST00000369452 NOL4LQ96MY1 436 aaPredicted RBP10.17□□□□□ -0.78
SHOC2-202ENST00000369452 PAXXQ9BUH6 204 aa10.17□□□□□ -0.78
SHOC2-202ENST00000369452 TMEM242Q9NWH2 141 aa10.17□□□□□ -0.78
SHOC2-202ENST00000369452 HECTD1Q9ULT8 2610 aa10.17□□□□□ -0.78
SHOC2-202ENST00000369452 PLP1P60201 277 aa10.17□□□□□ -0.78
SHOC2-202ENST00000369452 CENPWQ5EE01 88 aa10.17□□□□□ -0.78
SHOC2-202ENST00000369452 TCF24Q7RTU0 167 aa10.17□□□□□ -0.78
SHOC2-202ENST00000369452 EXOC3-AS1Q8N2X6 119 aa10.17□□□□□ -0.78
SHOC2-202ENST00000369452 C5orf52A6NGY3 159 aa10.16□□□□□ -0.78
SHOC2-202ENST00000369452 RPS10P46783 165 aaKnown RBP10.16□□□□□ -0.78
SHOC2-202ENST00000369452 PQLC2Q6ZP29 291 aa10.16□□□□□ -0.78
SHOC2-202ENST00000369452 CIARTQ8N365 385 aaPredicted RBP10.16□□□□□ -0.78
SHOC2-202ENST00000369452 FRZBQ92765 325 aa10.16□□□□□ -0.78
SHOC2-202ENST00000369452 OOSP1A8MZH6 123 aa10.16□□□□□ -0.78
SHOC2-202ENST00000369452 ISLRO14498 428 aa10.16□□□□□ -0.78
SHOC2-202ENST00000369452 CA1P00915 261 aaPredicted RBP10.16□□□□□ -0.78
SHOC2-202ENST00000369452 MS4A10Q96PG2 267 aa10.16□□□□□ -0.78
SHOC2-202ENST00000369452 FAM106CPP0CH98 169 aa10.16□□□□□ -0.78
SHOC2-202ENST00000369452 TEX38Q6PEX7 206 aa10.16□□□□□ -0.78
SHOC2-202ENST00000369452 ZNF600Q6ZNG1 722 aa10.16□□□□□ -0.78
SHOC2-202ENST00000369452 RNF223E7ERA6 249 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms