RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 RD3LP0DJH9 198 aa18.55■□□□□ 0.56
SNX3-203ENST00000368979 UQCC3Q6UW78 93 aa18.55■□□□□ 0.56
SNX3-203ENST00000368979 USMG5Q96IX5 58 aa18.55■□□□□ 0.56
SNX3-203ENST00000368979 RNF2Q99496 336 aa18.55■□□□□ 0.56
SNX3-203ENST00000368979 MRPL32Q9BYC8 188 aaKnown RBP18.55■□□□□ 0.56
SNX3-203ENST00000368979 KLK15Q9H2R5 256 aa18.55■□□□□ 0.56
SNX3-203ENST00000368979 DNAJC4Q9NNZ3 241 aa18.55■□□□□ 0.56
SNX3-203ENST00000368979 GAR1Q9NY12 217 aaKnown RBP18.55■□□□□ 0.56
SNX3-203ENST00000368979 DOK5Q9P104 306 aa18.55■□□□□ 0.56
SNX3-203ENST00000368979 TMEM89A2RUT3 159 aa18.54■□□□□ 0.56
SNX3-203ENST00000368979 FAM181BA6NEQ2 426 aa18.54■□□□□ 0.56
SNX3-203ENST00000368979 SCGB2A1O75556 95 aa18.54■□□□□ 0.56
SNX3-203ENST00000368979 PF4V1P10720 104 aa18.54■□□□□ 0.56
SNX3-203ENST00000368979 ADMP35318 185 aa18.54■□□□□ 0.56
SNX3-203ENST00000368979 SRSF3P84103 164 aaKnown RBP18.54■□□□□ 0.56
SNX3-203ENST00000368979 MIR17HGQ75NE6 70 aa18.54■□□□□ 0.56
SNX3-203ENST00000368979 ZNF418Q8TF45 676 aaPredicted RBP18.54■□□□□ 0.56
SNX3-203ENST00000368979 SONP18583 2426 aaKnown RBP18.54■□□□□ 0.56
SNX3-203ENST00000368979 ELOA3CA0A087WX78 387 aaPredicted RBP18.54■□□□□ 0.56
SNX3-203ENST00000368979 PSMB8P28062 276 aa18.54■□□□□ 0.56
SNX3-203ENST00000368979 GPR183P32249 361 aa18.54■□□□□ 0.56
SNX3-203ENST00000368979 HILS1P60008 231 aa18.54■□□□□ 0.56
SNX3-203ENST00000368979 C10orf113Q5VZT2 155 aa18.54■□□□□ 0.56
SNX3-203ENST00000368979 Q71RC1 249 aaPredicted RBP18.54■□□□□ 0.56
SNX3-203ENST00000368979 ZNF329Q86UD4 541 aa18.54■□□□□ 0.56
SNX3-203ENST00000368979 OR51G1Q8NGK1 321 aa18.54■□□□□ 0.56
SNX3-203ENST00000368979 RNASE1P07998 156 aaKnown RBP18.53■□□□□ 0.56
SNX3-203ENST00000368979 ORM2P19652 201 aa18.53■□□□□ 0.56
SNX3-203ENST00000368979 RAB9AP51151 201 aa18.53■□□□□ 0.56
SNX3-203ENST00000368979 GUK1Q16774 197 aa18.53■□□□□ 0.56
SNX3-203ENST00000368979 OR1B1Q8NGR6 318 aa18.53■□□□□ 0.56
SNX3-203ENST00000368979 CHRDL1Q9BU40 450 aa18.53■□□□□ 0.56
SNX3-203ENST00000368979 SERTAD4Q9NUC0 356 aa18.53■□□□□ 0.56
SNX3-203ENST00000368979 INAFM1C9JVW0 142 aa18.52■□□□□ 0.56
SNX3-203ENST00000368979 NUPL2O15504 423 aaKnown RBP18.52■□□□□ 0.56
SNX3-203ENST00000368979 HYPMO75409 117 aa18.52■□□□□ 0.56
SNX3-203ENST00000368979 CLEC3BP05452 202 aa18.52■□□□□ 0.56
SNX3-203ENST00000368979 RPL15P61313 204 aaKnown RBP18.52■□□□□ 0.56
SNX3-203ENST00000368979 PMS2P11Q13670 270 aa18.52■□□□□ 0.56
SNX3-203ENST00000368979 TOR2AQ5JU69 321 aa18.52■□□□□ 0.56
SNX3-203ENST00000368979 CLEC19AQ6UXS0 136 aa18.52■□□□□ 0.56
SNX3-203ENST00000368979 ZNF414Q96IQ9 312 aa18.52■□□□□ 0.56
SNX3-203ENST00000368979 TEP1Q99973 2627 aaKnown RBP18.51■□□□□ 0.55
SNX3-203ENST00000368979 WI2-2373I1.2A0A1W2PRP0 233 aa18.51■□□□□ 0.55
SNX3-203ENST00000368979 OR2C1O95371 312 aa18.51■□□□□ 0.55
SNX3-203ENST00000368979 CD5P06127 495 aa18.51■□□□□ 0.55
SNX3-203ENST00000368979 S100A1P23297 94 aa18.51■□□□□ 0.55
SNX3-203ENST00000368979 LYZP61626 148 aa18.51■□□□□ 0.55
SNX3-203ENST00000368979 SLC35B1P78383 322 aa18.51■□□□□ 0.55
SNX3-203ENST00000368979 MORN5Q5VZ52 161 aa18.51■□□□□ 0.55
SNX3-203ENST00000368979 C10orf99Q6UWK7 81 aa18.51■□□□□ 0.55
SNX3-203ENST00000368979 Q6ZSV7 163 aa18.51■□□□□ 0.55
SNX3-203ENST00000368979 ZNF491Q8N8L2 437 aa18.51■□□□□ 0.55
SNX3-203ENST00000368979 PBDC1Q9BVG4 233 aa18.51■□□□□ 0.55
SNX3-203ENST00000368979 TMPRSS5Q9H3S3 457 aa18.51■□□□□ 0.55
SNX3-203ENST00000368979 TECRQ9NZ01 308 aaKnown RBP18.51■□□□□ 0.55
SNX3-203ENST00000368979 TGOLN2O43493 480 aa18.5■□□□□ 0.55
SNX3-203ENST00000368979 CXorf1O96002 111 aa18.5■□□□□ 0.55
SNX3-203ENST00000368979 ARL14EPLP0DKL9 152 aa18.5■□□□□ 0.55
SNX3-203ENST00000368979 LCNL1Q6ZST4 164 aa18.5■□□□□ 0.55
SNX3-203ENST00000368979 Q8WTZ3 238 aa18.5■□□□□ 0.55
SNX3-203ENST00000368979 RNF125Q96EQ8 232 aa18.5■□□□□ 0.55
SNX3-203ENST00000368979 UHRF2Q96PU4 802 aa18.5■□□□□ 0.55
SNX3-203ENST00000368979 TMEM231Q9H6L2 316 aa18.5■□□□□ 0.55
SNX3-203ENST00000368979 GNG13Q9P2W3 67 aa18.5■□□□□ 0.55
SNX3-203ENST00000368979 A0A0G2JLM5 398 aa18.49■□□□□ 0.55
SNX3-203ENST00000368979 RBFOX3A6NFN3 312 aa18.49■□□□□ 0.55
SNX3-203ENST00000368979 I3L521 148 aa18.49■□□□□ 0.55
SNX3-203ENST00000368979 LINC00305Q7Z4B0 112 aa18.49■□□□□ 0.55
SNX3-203ENST00000368979 MRPL27Q9P0M9 148 aaKnown RBP18.49■□□□□ 0.55
SNX3-203ENST00000368979 IL4P05112 153 aa18.49■□□□□ 0.55
SNX3-203ENST00000368979 C8orf88P0DMB2 117 aa18.49■□□□□ 0.55
SNX3-203ENST00000368979 PSMB3P49720 205 aa18.49■□□□□ 0.55
SNX3-203ENST00000368979 TAS2R45P59539 299 aa18.49■□□□□ 0.55
SNX3-203ENST00000368979 FOXE3Q13461 319 aa18.49■□□□□ 0.55
SNX3-203ENST00000368979 ZNF506Q5JVG8 444 aa18.49■□□□□ 0.55
SNX3-203ENST00000368979 TEX38Q6PEX7 206 aa18.49■□□□□ 0.55
SNX3-203ENST00000368979 ZNF600Q6ZNG1 722 aa18.49■□□□□ 0.55
SNX3-203ENST00000368979 SLC25A2Q9BXI2 301 aa18.49■□□□□ 0.55
SNX3-203ENST00000368979 EIF5A2Q9GZV4 153 aaKnown RBP18.49■□□□□ 0.55
SNX3-203ENST00000368979 HIGD1AQ9Y241 93 aa18.49■□□□□ 0.55
SNX3-203ENST00000368979 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.48■□□□□ 0.55
SNX3-203ENST00000368979 LOC102723971A0A1B0GUV8 181 aa18.48■□□□□ 0.55
SNX3-203ENST00000368979 ELANEP08246 267 aa18.48■□□□□ 0.55
SNX3-203ENST00000368979 HAGHQ16775 308 aa18.48■□□□□ 0.55
SNX3-203ENST00000368979 KHDC3LQ587J8 217 aa18.48■□□□□ 0.55
SNX3-203ENST00000368979 ZNF503Q96F45 646 aa18.48■□□□□ 0.55
SNX3-203ENST00000368979 FAM167A-AS1Q96KT0 104 aa18.48■□□□□ 0.55
SNX3-203ENST00000368979 RARRES2Q99969 163 aa18.48■□□□□ 0.55
SNX3-203ENST00000368979 TREM1Q9NP99 234 aa18.48■□□□□ 0.55
SNX3-203ENST00000368979 IFNA1P01562 189 aa18.47■□□□□ 0.55
SNX3-203ENST00000368979 BCL2P10415 239 aa18.47■□□□□ 0.55
SNX3-203ENST00000368979 KIAA0141Q14154 515 aaPredicted RBP18.47■□□□□ 0.55
SNX3-203ENST00000368979 PEA15Q15121 130 aa18.47■□□□□ 0.55
SNX3-203ENST00000368979 ZNF343Q6P1L6 599 aa18.47■□□□□ 0.55
SNX3-203ENST00000368979 PQLC2Q6ZP29 291 aa18.47■□□□□ 0.55
SNX3-203ENST00000368979 RNF152Q8N8N0 203 aa18.47■□□□□ 0.55
SNX3-203ENST00000368979 MYOZ3Q8TDC0 251 aa18.47■□□□□ 0.55
SNX3-203ENST00000368979 PUS1Q9Y606 427 aaKnown RBP eCLIP18.47■□□□□ 0.55
SNX3-203ENST00000368979 TRAV5A0A0B4J249 113 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms