RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 RPP25LQ8N5L8 163 aaKnown RBP6.87□□□□□ -1.31
SNX27-201ENST00000368838 VN1R17PQ8TDU5 208 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 RNF2Q99496 336 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 MGST2Q99735 147 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 TXNDC17Q9BRA2 123 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 SLC25A33Q9BSK2 321 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 SCRT1Q9BWW7 348 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 ARL2-SNX15V9GYD0 113 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 IGKV1OR2-108A0A075B7D4 117 aa6.86□□□□□ -1.31
SNX27-201ENST00000368838 CTXND1A0A1B0GTU2 59 aa6.86□□□□□ -1.31
SNX27-201ENST00000368838 NCBP2LA6PVI3 153 aaKnown RBP6.86□□□□□ -1.31
SNX27-201ENST00000368838 K7EIM0 57 aa6.86□□□□□ -1.31
SNX27-201ENST00000368838 AGPAT2O15120 278 aa6.86□□□□□ -1.31
SNX27-201ENST00000368838 OPN1MWP04001 364 aa6.86□□□□□ -1.31
SNX27-201ENST00000368838 FABP1P07148 127 aa6.86□□□□□ -1.31
SNX27-201ENST00000368838 H2AFB1P0C5Y9 115 aa6.86□□□□□ -1.31
SNX27-201ENST00000368838 OPN1MW2P0DN77 364 aa6.86□□□□□ -1.31
SNX27-201ENST00000368838 OPN1MW3P0DN78 364 aa6.86□□□□□ -1.31
SNX27-201ENST00000368838 PPT1P50897 306 aa6.86□□□□□ -1.31
SNX27-201ENST00000368838 NDPQ00604 133 aa6.86□□□□□ -1.31
SNX27-201ENST00000368838 HNF4GQ14541 408 aa6.86□□□□□ -1.31
SNX27-201ENST00000368838 SLC7A5P1Q8MH63 180 aa6.86□□□□□ -1.31
SNX27-201ENST00000368838 OR10G4Q8NGN3 311 aa6.86□□□□□ -1.31
SNX27-201ENST00000368838 GATAD1Q8WUU5 269 aa6.86□□□□□ -1.31
SNX27-201ENST00000368838 RSG1Q9BU20 258 aa6.86□□□□□ -1.31
SNX27-201ENST00000368838 ACTR3CQ9C0K3 210 aaPredicted RBP6.86□□□□□ -1.31
SNX27-201ENST00000368838 C16orf95Q9H693 158 aa6.86□□□□□ -1.31
SNX27-201ENST00000368838 DMRT1Q9Y5R6 373 aa6.86□□□□□ -1.31
SNX27-201ENST00000368838 IGKV1D-37A0A075B6S9 117 aa6.85□□□□□ -1.31
SNX27-201ENST00000368838 TCRBV4S1A1TA0A5B7 111 aa6.85□□□□□ -1.31
SNX27-201ENST00000368838 PSMB11A5LHX3 300 aa6.85□□□□□ -1.31
SNX27-201ENST00000368838 CLN5O75503 358 aa6.85□□□□□ -1.31
SNX27-201ENST00000368838 PRH1P02810 166 aa6.85□□□□□ -1.31
SNX27-201ENST00000368838 LINC00869P0C866 280 aa6.85□□□□□ -1.31
SNX27-201ENST00000368838 NPBWR1P48145 328 aa6.85□□□□□ -1.31
SNX27-201ENST00000368838 PSMB3P49720 205 aa6.85□□□□□ -1.31
SNX27-201ENST00000368838 YPEL3P61236 119 aaPredicted RBP6.85□□□□□ -1.31
SNX27-201ENST00000368838 FBLN7Q53RD9 439 aa6.85□□□□□ -1.31
SNX27-201ENST00000368838 C10orf91Q5T1B1 145 aa6.85□□□□□ -1.31
SNX27-201ENST00000368838 ACSM6Q6P461 480 aa6.85□□□□□ -1.31
SNX27-201ENST00000368838 TMEM182Q6ZP80 229 aaPredicted RBP6.85□□□□□ -1.31
SNX27-201ENST00000368838 COMMD7Q86VX2 200 aa6.85□□□□□ -1.31
SNX27-201ENST00000368838 ABHD5Q8WTS1 349 aa6.85□□□□□ -1.31
SNX27-201ENST00000368838 CXorf58Q96LI9 332 aa6.85□□□□□ -1.31
SNX27-201ENST00000368838 MRPL32Q9BYC8 188 aaKnown RBP6.85□□□□□ -1.31
SNX27-201ENST00000368838 SLC39A9Q9NUM3 307 aa6.85□□□□□ -1.31
SNX27-201ENST00000368838 RNF24Q9Y225 148 aa6.85□□□□□ -1.31
SNX27-201ENST00000368838 PXMP4Q9Y6I8 212 aa6.85□□□□□ -1.31
SNX27-201ENST00000368838 DNAH3Q8TD57 4116 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 AP4M1O00189 453 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 YIF1AO95070 293 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 MT-CO2P00403 227 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 IGLC1P0CG04 106 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 STAG3L2P0CL84 134 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 STAG3L3P0CL85 134 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 CD24P25063 80 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 PPIFP30405 207 aaKnown RBP6.84□□□□□ -1.31
SNX27-201ENST00000368838 B2MP61769 119 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 AKR1C1Q04828 323 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 ZNF726P1Q15940 193 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 NSUN5P1Q3KNT7 163 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 KHDC3LQ587J8 217 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 FFAR4Q5NUL3 377 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 S100A7AQ86SG5 101 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 Q8N2B8 174 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 KLHDC1Q8N7A1 406 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 STPG3Q8N7X2 389 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 NECAP1Q8NC96 275 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 OR10G9Q8NGN4 311 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 OR10G7Q8NGN6 311 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 PFDN5Q99471 154 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 PBDC1Q9BVG4 233 aa6.84□□□□□ -1.31
SNX27-201ENST00000368838 SMCO3A2RU48 225 aa6.83□□□□□ -1.32
SNX27-201ENST00000368838 FAM223BA6NKX1 122 aa6.83□□□□□ -1.32
SNX27-201ENST00000368838 ATP6V0E1O15342 81 aa6.83□□□□□ -1.32
SNX27-201ENST00000368838 SCGB2A1O75556 95 aa6.83□□□□□ -1.32
SNX27-201ENST00000368838 HSPB1P04792 205 aaKnown RBP6.83□□□□□ -1.32
SNX27-201ENST00000368838 OR5G3P0C626 314 aa6.83□□□□□ -1.32
SNX27-201ENST00000368838 DEFA4P12838 97 aa6.83□□□□□ -1.32
SNX27-201ENST00000368838 ZP3P21754 424 aa6.83□□□□□ -1.32
SNX27-201ENST00000368838 FHITP49789 147 aa6.83□□□□□ -1.32
SNX27-201ENST00000368838 RHOBP62745 196 aa6.83□□□□□ -1.32
SNX27-201ENST00000368838 GNB1P62873 340 aa6.83□□□□□ -1.32
SNX27-201ENST00000368838 CFHR3Q02985 330 aa6.83□□□□□ -1.32
SNX27-201ENST00000368838 CYP2G1PQ6ZSU1 146 aa6.83□□□□□ -1.32
SNX27-201ENST00000368838 TMEM219Q86XT9 240 aa6.83□□□□□ -1.32
SNX27-201ENST00000368838 FAM223AQ8IWN6 122 aa6.83□□□□□ -1.32
SNX27-201ENST00000368838 STXBP6Q8NFX7 210 aa6.83□□□□□ -1.32
SNX27-201ENST00000368838 OR1L4Q8NGR5 311 aa6.83□□□□□ -1.32
SNX27-201ENST00000368838 FAM213BQ8TBF2 198 aa6.83□□□□□ -1.32
SNX27-201ENST00000368838 HSPB9Q9BQS6 159 aa6.83□□□□□ -1.32
SNX27-201ENST00000368838 HRH4Q9H3N8 390 aa6.83□□□□□ -1.32
SNX27-201ENST00000368838 TRAV41A0A0B4J266 112 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 TMEM218A2RU14 115 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 MAP1LC3B2A6NCE7 125 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 OR2C1O95371 312 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 IGLV1-40P01703 118 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 CD28P10747 220 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 OR10J1P30954 320 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 S100A7P31151 101 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms