RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 EML5Q05BV3 1969 aa0.77□□□□□ -2.29
ECHDC1-201ENST00000368287 HEATR1Q9H583 2144 aaKnown RBP0.77□□□□□ -2.29
ECHDC1-201ENST00000368287 A0A087WX48 190 aa0.77□□□□□ -2.29
ECHDC1-201ENST00000368287 TRAV4A0A0B4J268 109 aa0.77□□□□□ -2.29
ECHDC1-201ENST00000368287 CYB5BO43169 146 aa0.77□□□□□ -2.29
ECHDC1-201ENST00000368287 HYPMO75409 117 aa0.77□□□□□ -2.29
ECHDC1-201ENST00000368287 ESRGQ1W209 222 aa0.77□□□□□ -2.29
ECHDC1-201ENST00000368287 Q8IYB0 196 aa0.77□□□□□ -2.29
ECHDC1-201ENST00000368287 ZNF418Q8TF45 676 aaPredicted RBP0.77□□□□□ -2.29
ECHDC1-201ENST00000368287 SLAMF6Q96DU3 332 aa0.77□□□□□ -2.29
ECHDC1-201ENST00000368287 HIST1H2BLQ99880 126 aa0.77□□□□□ -2.29
ECHDC1-201ENST00000368287 BCL2L10Q9HD36 194 aa0.77□□□□□ -2.29
ECHDC1-201ENST00000368287 KLK9Q9UKQ9 250 aa0.77□□□□□ -2.29
ECHDC1-201ENST00000368287 SLC35A3Q9Y2D2 325 aa0.77□□□□□ -2.29
ECHDC1-201ENST00000368287 RIMBP3CA6NJZ7 1639 aa0.77□□□□□ -2.29
ECHDC1-201ENST00000368287 RIMBP3BA6NNM3 1639 aa0.77□□□□□ -2.29
ECHDC1-201ENST00000368287 RIMBP3Q9UFD9 1639 aa0.77□□□□□ -2.29
ECHDC1-201ENST00000368287 PLXNA4Q9HCM2 1894 aa0.77□□□□□ -2.29
ECHDC1-201ENST00000368287 DOCK4Q8N1I0 1966 aa0.76□□□□□ -2.29
ECHDC1-201ENST00000368287 RTL1A6NKG5 1358 aa0.76□□□□□ -2.29
ECHDC1-201ENST00000368287 GADD45GO95257 159 aa0.76□□□□□ -2.29
ECHDC1-201ENST00000368287 CST2P09228 141 aa0.76□□□□□ -2.29
ECHDC1-201ENST00000368287 ATP5G3P48201 142 aa0.76□□□□□ -2.29
ECHDC1-201ENST00000368287 PIGPP57054 158 aa0.76□□□□□ -2.29
ECHDC1-201ENST00000368287 RHOBP62745 196 aa0.76□□□□□ -2.29
ECHDC1-201ENST00000368287 DYNLT1P63172 113 aa0.76□□□□□ -2.29
ECHDC1-201ENST00000368287 C1orf137Q5JT78 98 aa0.76□□□□□ -2.29
ECHDC1-201ENST00000368287 CLECL1Q8IZS7 167 aa0.76□□□□□ -2.29
ECHDC1-201ENST00000368287 KIFC1Q9BW19 673 aa0.76□□□□□ -2.29
ECHDC1-201ENST00000368287 ENY2Q9NPA8 101 aa0.76□□□□□ -2.29
ECHDC1-201ENST00000368287 ACER3Q9NUN7 267 aa0.76□□□□□ -2.29
ECHDC1-201ENST00000368287 HS3ST2Q9Y278 367 aa0.76□□□□□ -2.29
ECHDC1-201ENST00000368287 FAM32AQ9Y421 112 aaKnown RBP0.76□□□□□ -2.29
ECHDC1-201ENST00000368287 HSD11B1P28845 292 aa0.75□□□□□ -2.29
ECHDC1-201ENST00000368287 ERP29P30040 261 aaKnown RBP0.75□□□□□ -2.29
ECHDC1-201ENST00000368287 REEP5Q00765 189 aa0.75□□□□□ -2.29
ECHDC1-201ENST00000368287 LIN52Q52LA3 116 aa0.75□□□□□ -2.29
ECHDC1-201ENST00000368287 SOSTDC1Q6X4U4 206 aa0.75□□□□□ -2.29
ECHDC1-201ENST00000368287 Q8N814 137 aa0.75□□□□□ -2.29
ECHDC1-201ENST00000368287 OR11H6Q8NGC7 330 aa0.75□□□□□ -2.29
ECHDC1-201ENST00000368287 FAM172AQ8WUF8 416 aa0.75□□□□□ -2.29
ECHDC1-201ENST00000368287 PRADC1Q9BSG0 188 aa0.75□□□□□ -2.29
ECHDC1-201ENST00000368287 C9orf16Q9BUW7 83 aa0.75□□□□□ -2.29
ECHDC1-201ENST00000368287 RNF122Q9H9V4 155 aa0.75□□□□□ -2.29
ECHDC1-201ENST00000368287 NMNAT1Q9HAN9 279 aaPredicted RBP0.75□□□□□ -2.29
ECHDC1-201ENST00000368287 CDC42SE1Q9NRR8 79 aa0.75□□□□□ -2.29
ECHDC1-201ENST00000368287 C7orf71A4D174 169 aa0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 CCDC160A6NGH7 325 aa0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 TMEM210A6NLX4 147 aa0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 B4DSR2 109 aa0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 PROSCO94903 275 aa0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 SERPINA1P01009 418 aa0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 CAPZBP47756 277 aa0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 SPA17Q15506 151 aa0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 TAF1AQ15573 450 aaPredicted RBP0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 TEX261Q6UWH6 196 aa0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 LINC00301Q8NCQ3 95 aa0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 OR10X1Q8NGY0 326 aa0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 GNPDA2Q8TDQ7 276 aa0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 BTF3L4Q96K17 158 aa0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 TMEM126AQ9H061 195 aa0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 PARVBQ9HBI1 364 aa0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 NHP2Q9NX24 153 aaKnown RBP0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 U3KQ87 197 aa0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 SNRNP200O75643 2136 aaKnown RBP0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 KIAA1549Q9HCM3 1950 aa0.74□□□□□ -2.29
ECHDC1-201ENST00000368287 MYO5AQ9Y4I1 1855 aaKnown RBP0.73□□□□□ -2.29
ECHDC1-201ENST00000368287 ZNF736B4DX44 427 aaPredicted RBP0.73□□□□□ -2.29
ECHDC1-201ENST00000368287 ZNF25P17030 456 aaPredicted RBP0.73□□□□□ -2.29
ECHDC1-201ENST00000368287 EIF5AP63241 154 aaKnown RBP0.73□□□□□ -2.29
ECHDC1-201ENST00000368287 RRN3P1Q2M238 152 aa0.73□□□□□ -2.29
ECHDC1-201ENST00000368287 SPRNQ5BIV9 151 aa0.73□□□□□ -2.29
ECHDC1-201ENST00000368287 GOLT1AQ6ZVE7 132 aa0.73□□□□□ -2.29
ECHDC1-201ENST00000368287 PDZD9Q8IXQ8 264 aa0.73□□□□□ -2.29
ECHDC1-201ENST00000368287 SLC30A7Q8NEW0 376 aa0.73□□□□□ -2.29
ECHDC1-201ENST00000368287 OR2T10Q8NGZ9 312 aa0.73□□□□□ -2.29
ECHDC1-201ENST00000368287 MRPL57Q9BQC6 102 aaKnown RBP0.73□□□□□ -2.29
ECHDC1-201ENST00000368287 OPTCQ9UBM4 332 aa0.73□□□□□ -2.29
ECHDC1-201ENST00000368287 CHCHD2Q9Y6H1 151 aaPredicted RBP0.73□□□□□ -2.29
ECHDC1-201ENST00000368287 FBN2P35556 2912 aa0.73□□□□□ -2.29
ECHDC1-201ENST00000368287 ADGRB2O60241 1585 aa0.72□□□□□ -2.29
ECHDC1-201ENST00000368287 TRBV19A0A075B6N1 114 aa0.72□□□□□ -2.29
ECHDC1-201ENST00000368287 J3QRK9 145 aa0.72□□□□□ -2.29
ECHDC1-201ENST00000368287 M0R2N4 97 aa0.72□□□□□ -2.29
ECHDC1-201ENST00000368287 INE1O15225 51 aa0.72□□□□□ -2.29
ECHDC1-201ENST00000368287 HMGB3O15347 200 aaKnown RBP0.72□□□□□ -2.29
ECHDC1-201ENST00000368287 SRP14P37108 136 aaKnown RBP0.72□□□□□ -2.29
ECHDC1-201ENST00000368287 KRR1Q13601 381 aaKnown RBP0.72□□□□□ -2.29
ECHDC1-201ENST00000368287 LYRM7Q5U5X0 104 aa0.72□□□□□ -2.29
ECHDC1-201ENST00000368287 C6orf62Q9GZU0 229 aaPredicted RBP0.72□□□□□ -2.29
ECHDC1-201ENST00000368287 ARMC1Q9NVT9 282 aa0.72□□□□□ -2.29
ECHDC1-201ENST00000368287 ARL2BPQ9Y2Y0 163 aa0.72□□□□□ -2.29
ECHDC1-201ENST00000368287 CHD3Q12873 2000 aaKnown RBP0.72□□□□□ -2.29
ECHDC1-201ENST00000368287 ADGRL3Q9HAR2 1447 aa0.72□□□□□ -2.29
ECHDC1-201ENST00000368287 ALPK3Q96L96 1907 aa0.72□□□□□ -2.29
ECHDC1-201ENST00000368287 CAMSAP1Q5T5Y3 1602 aa0.71□□□□□ -2.3
ECHDC1-201ENST00000368287 NUP210LQ5VU65 1888 aa0.71□□□□□ -2.3
ECHDC1-201ENST00000368287 LAMA4Q16363 1823 aa0.71□□□□□ -2.3
ECHDC1-201ENST00000368287 LAMB4A4D0S4 1761 aa0.71□□□□□ -2.3
ECHDC1-201ENST00000368287 UNC13CQ8NB66 2214 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms