RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 MBD3L4A6NDZ8 208 aaPredicted RBP10.59□□□□□ -0.71
PTPRK-207ENST00000368226 MBD3L3A6NE82 208 aaPredicted RBP10.59□□□□□ -0.71
PTPRK-207ENST00000368226 MBD3L5A6NJ08 208 aaPredicted RBP10.59□□□□□ -0.71
PTPRK-207ENST00000368226 HEPN1Q6WQI6 88 aa10.59□□□□□ -0.71
PTPRK-207ENST00000368226 MBD3L2Q8NHZ7 208 aaPredicted RBP10.59□□□□□ -0.71
PTPRK-207ENST00000368226 MSRB2Q9Y3D2 182 aa10.59□□□□□ -0.71
PTPRK-207ENST00000368226 TREML4Q6UXN2 200 aa10.58□□□□□ -0.72
PTPRK-207ENST00000368226 KIF26BQ2KJY2 2108 aa10.58□□□□□ -0.72
PTPRK-207ENST00000368226 LINC00473A8K010 186 aa10.58□□□□□ -0.72
PTPRK-207ENST00000368226 UBE2E2Q96LR5 201 aa10.58□□□□□ -0.72
PTPRK-207ENST00000368226 TRAV21A0A0B4J279 112 aa10.58□□□□□ -0.72
PTPRK-207ENST00000368226 DSCR9P59020 149 aa10.58□□□□□ -0.72
PTPRK-207ENST00000368226 INTS1Q8N201 2190 aaKnown RBP10.58□□□□□ -0.72
PTPRK-207ENST00000368226 NCOR1O75376 2440 aa10.58□□□□□ -0.72
PTPRK-207ENST00000368226 FREM3P0C091 2139 aa10.58□□□□□ -0.72
PTPRK-207ENST00000368226 PET117Q6UWS5 81 aa10.58□□□□□ -0.72
PTPRK-207ENST00000368226 C20orf204Q6ZNR8 217 aa10.58□□□□□ -0.72
PTPRK-207ENST00000368226 BUB1B-PAK6H3BSN5 160 aa10.58□□□□□ -0.72
PTPRK-207ENST00000368226 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.57□□□□□ -0.72
PTPRK-207ENST00000368226 OCC1Q8TAD7 63 aa10.57□□□□□ -0.72
PTPRK-207ENST00000368226 Q8TAT8 98 aa10.57□□□□□ -0.72
PTPRK-207ENST00000368226 H0YJW9 148 aa10.57□□□□□ -0.72
PTPRK-207ENST00000368226 FCN3O75636 299 aa10.57□□□□□ -0.72
PTPRK-207ENST00000368226 HS3ST6Q96QI5 342 aa10.57□□□□□ -0.72
PTPRK-207ENST00000368226 TRAV12-3A0A0B4J271 114 aa10.57□□□□□ -0.72
PTPRK-207ENST00000368226 UBE2DNLQ8IWF7 75 aa10.57□□□□□ -0.72
PTPRK-207ENST00000368226 LINC00469Q8N7U9 141 aa10.57□□□□□ -0.72
PTPRK-207ENST00000368226 COQ2Q96H96 371 aa10.57□□□□□ -0.72
PTPRK-207ENST00000368226 CHCHD5Q9BSY4 110 aa10.57□□□□□ -0.72
PTPRK-207ENST00000368226 AKAP6Q13023 2319 aa10.57□□□□□ -0.72
PTPRK-207ENST00000368226 H3BRM9 83 aa10.57□□□□□ -0.72
PTPRK-207ENST00000368226 WISP1O95388 367 aa10.57□□□□□ -0.72
PTPRK-207ENST00000368226 COL6A6A6NMZ7 2263 aa10.57□□□□□ -0.72
PTPRK-207ENST00000368226 TICRRQ7Z2Z1 1910 aa10.57□□□□□ -0.72
PTPRK-207ENST00000368226 SERF1AO75920 110 aa10.57□□□□□ -0.72
PTPRK-207ENST00000368226 SRSF4Q08170 494 aaKnown RBP10.57□□□□□ -0.72
PTPRK-207ENST00000368226 ZNF257Q9Y2Q1 563 aa10.57□□□□□ -0.72
PTPRK-207ENST00000368226 FNDC1Q4ZHG4 1894 aaPredicted RBP10.56□□□□□ -0.72
PTPRK-207ENST00000368226 DUSP14O95147 198 aaKnown RBP10.56□□□□□ -0.72
PTPRK-207ENST00000368226 NCR2O95944 276 aa10.56□□□□□ -0.72
PTPRK-207ENST00000368226 SMIM13P0DJ93 91 aa10.56□□□□□ -0.72
PTPRK-207ENST00000368226 CNTFRP26992 372 aa10.56□□□□□ -0.72
PTPRK-207ENST00000368226 SAA4P35542 130 aa10.56□□□□□ -0.72
PTPRK-207ENST00000368226 SLC25A48Q6ZT89 311 aaKnown RBP10.56□□□□□ -0.72
PTPRK-207ENST00000368226 COPS9Q8WXC6 57 aa10.56□□□□□ -0.72
PTPRK-207ENST00000368226 ID3Q02535 119 aa10.56□□□□□ -0.72
PTPRK-207ENST00000368226 MLANAQ16655 118 aa10.56□□□□□ -0.72
PTPRK-207ENST00000368226 PIP4P2Q8N4L2 257 aa10.56□□□□□ -0.72
PTPRK-207ENST00000368226 SLC25A39Q9BZJ4 359 aaPredicted RBP10.56□□□□□ -0.72
PTPRK-207ENST00000368226 TRBV7-9A0A0J9YWB2 115 aa10.56□□□□□ -0.72
PTPRK-207ENST00000368226 NPC2P61916 151 aa10.56□□□□□ -0.72
PTPRK-207ENST00000368226 K7ENP7 123 aa10.56□□□□□ -0.72
PTPRK-207ENST00000368226 SSC4DQ8WTU2 575 aa10.56□□□□□ -0.72
PTPRK-207ENST00000368226 PARD6GQ9BYG4 376 aaPredicted RBP10.56□□□□□ -0.72
PTPRK-207ENST00000368226 VCX2Q9H322 139 aa10.56□□□□□ -0.72
PTPRK-207ENST00000368226 FBLN5Q9UBX5 448 aa10.56□□□□□ -0.72
PTPRK-207ENST00000368226 ATP5LO75964 103 aa10.55□□□□□ -0.72
PTPRK-207ENST00000368226 CRPP02741 224 aa10.55□□□□□ -0.72
PTPRK-207ENST00000368226 TYMSP04818 313 aa10.55□□□□□ -0.72
PTPRK-207ENST00000368226 OR9G4Q8NGQ1 327 aa10.55□□□□□ -0.72
PTPRK-207ENST00000368226 MGST2Q99735 147 aa10.55□□□□□ -0.72
PTPRK-207ENST00000368226 DPH3P1Q9H4G8 78 aa10.55□□□□□ -0.72
PTPRK-207ENST00000368226 SEPSECSQ9HD40 501 aaKnown RBP10.55□□□□□ -0.72
PTPRK-207ENST00000368226 MRPS16Q9Y3D3 137 aaKnown RBP10.55□□□□□ -0.72
PTPRK-207ENST00000368226 IGKV1-5P01602 117 aa10.55□□□□□ -0.72
PTPRK-207ENST00000368226 CD28P10747 220 aa10.55□□□□□ -0.72
PTPRK-207ENST00000368226 MYO7BQ6PIF6 2116 aa10.55□□□□□ -0.72
PTPRK-207ENST00000368226 FAM209BQ5JX69 171 aa10.55□□□□□ -0.72
PTPRK-207ENST00000368226 Q6P435 159 aa10.55□□□□□ -0.72
PTPRK-207ENST00000368226 IL17RELQ6ZVW7 336 aa10.55□□□□□ -0.72
PTPRK-207ENST00000368226 NUDT10Q8NFP7 164 aa10.55□□□□□ -0.72
PTPRK-207ENST00000368226 TNFRSF14Q92956 283 aa10.55□□□□□ -0.72
PTPRK-207ENST00000368226 Q96MF0 132 aa10.55□□□□□ -0.72
PTPRK-207ENST00000368226 IFI27P40305 119 aaPredicted RBP10.55□□□□□ -0.72
PTPRK-207ENST00000368226 Q5PR19 223 aa10.55□□□□□ -0.72
PTPRK-207ENST00000368226 GGTLC1Q9BX51 225 aa10.55□□□□□ -0.72
PTPRK-207ENST00000368226 DERL1Q9BUN8 251 aa10.54□□□□□ -0.72
PTPRK-207ENST00000368226 CARHSP1Q9Y2V2 147 aaKnown RBP10.54□□□□□ -0.72
PTPRK-207ENST00000368226 MPDZO75970 2070 aa10.54□□□□□ -0.72
PTPRK-207ENST00000368226 LY6G6EA0A0G2JKS1 128 aa10.54□□□□□ -0.72
PTPRK-207ENST00000368226 C19orf67A6NJJ6 358 aa10.54□□□□□ -0.72
PTPRK-207ENST00000368226 IGHG3P01860 377 aa10.54□□□□□ -0.72
PTPRK-207ENST00000368226 SUPT4H1P63272 117 aaKnown RBP10.54□□□□□ -0.72
PTPRK-207ENST00000368226 DUX4L9Q6RFH8 374 aaPredicted RBP10.54□□□□□ -0.72
PTPRK-207ENST00000368226 U3KQA8 63 aa10.54□□□□□ -0.72
PTPRK-207ENST00000368226 TRGV1A0A0A0MS02 117 aa10.54□□□□□ -0.72
PTPRK-207ENST00000368226 LINC01356Q8N9X3 169 aa10.54□□□□□ -0.72
PTPRK-207ENST00000368226 RCHY1Q96PM5 261 aa10.54□□□□□ -0.72
PTPRK-207ENST00000368226 C5orf64Q2M2E5 130 aa10.54□□□□□ -0.72
PTPRK-207ENST00000368226 IGKV1-16P04430 117 aa10.54□□□□□ -0.72
PTPRK-207ENST00000368226 A0A1B0GV72 72 aa10.53□□□□□ -0.72
PTPRK-207ENST00000368226 SRRM4A7MD48 611 aaKnown RBP10.53□□□□□ -0.72
PTPRK-207ENST00000368226 VGLL1Q99990 258 aa10.53□□□□□ -0.72
PTPRK-207ENST00000368226 TMEM249Q2WGJ8 235 aa10.53□□□□□ -0.72
PTPRK-207ENST00000368226 WDR83OSQ9Y284 106 aa10.53□□□□□ -0.72
PTPRK-207ENST00000368226 TP53BP1Q12888 1972 aaPredicted RBP10.53□□□□□ -0.72
PTPRK-207ENST00000368226 PGPEP1Q9NXJ5 209 aa10.53□□□□□ -0.72
PTPRK-207ENST00000368226 A0A1B0GV90 55 aa10.53□□□□□ -0.72
PTPRK-207ENST00000368226 SAMD13Q5VXD3 122 aa10.53□□□□□ -0.72
PTPRK-207ENST00000368226 DOCK8Q8NF50 2099 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms