RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 UNQ6494/PRO21346Q6UXR6 183 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 TMEM86BQ8N661 226 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 WFDC12Q8WWY7 111 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 AKAP6Q13023 2319 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 IGHV3-72A0A0B4J1Y9 119 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 TRBV7-9A0A0J9YWB2 115 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 IL18BPO95998 194 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 LHFPL1Q86WI0 220 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 BCL6BQ8N143 479 aaPredicted RBP7.43□□□□□ -1.22
SYNE1-209ENST00000367257 IGKV3D-15A0A087WSY6 115 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 H0YIZ8 118 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 CECR9P0C854 216 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 CFPP27918 469 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 IMMP1LQ96LU5 166 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 DCTN5Q9BTE1 182 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 GGTLC1Q9BX51 225 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 C17orf100A8MU93 164 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 GAS1P54826 345 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 CENPVQ7Z7K6 275 aaPredicted RBP7.43□□□□□ -1.22
SYNE1-209ENST00000367257 RNF125Q96EQ8 232 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 GFRA4Q9GZZ7 299 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 SLC25A15Q9Y619 301 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 LYL1P12980 280 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 ATP5G3P48201 142 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 SPSB3Q6PJ21 355 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 WFDC6Q9BQY6 131 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 TMEM126AQ9H061 195 aa7.43□□□□□ -1.22
SYNE1-209ENST00000367257 IGHV2-26A0A0B4J1V2 119 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 C22orf46C9J442 243 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 CELA3AP09093 270 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 SPATA31B1PQ5VZV4 182 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 GAGE2AQ6NT46 116 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 MIR17HGQ75NE6 70 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 OR13A1Q8NGR1 328 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 PSG8Q9UQ74 426 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 APELAP0DMC3 54 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 CD33P20138 364 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 RPL39P5Q59GN2 51 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 MRPL14Q6P1L8 145 aaKnown RBP7.42□□□□□ -1.22
SYNE1-209ENST00000367257 TRGV9Q99603 122 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 CCL19Q99731 98 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 NPFFR1Q9GZQ6 430 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 MINOS1Q5TGZ0 78 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 FAM74A4Q5TZK3 123 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 TEX43Q6ZNM6 134 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 PPDPFLQ8WWR9 84 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 DUX3Q96PT4 197 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 TMEM133Q9H2Q1 129 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 MINOS1-NBL1R4GNA1 71 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 SPAARA0A1B0GVQ0 90 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 ZIC3O60481 467 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 MORN2Q502X0 79 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 LCN12Q6JVE5 192 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 IFI27L1Q96BM0 104 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 CRIM1Q9NZV1 1036 aa7.42□□□□□ -1.22
SYNE1-209ENST00000367257 hDV102S1A0JD36 115 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 J3KT08 172 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 SAA1P0DJI8 122 aaPredicted RBP7.41□□□□□ -1.22
SYNE1-209ENST00000367257 CDKN1AP38936 164 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 ATP5J2P56134 94 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 RPRMLQ8N4K4 120 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 TMEM167AQ8TBQ9 72 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 NRTNQ99748 197 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 MYO16Q9Y6X6 1858 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 KIAA1671Q9BY89 1806 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 ETDBQ3ZM63 59 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 SFTA2Q6UW10 78 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 WBP1Q96G27 269 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 MRPL20Q9BYC9 149 aaKnown RBP7.41□□□□□ -1.22
SYNE1-209ENST00000367257 TRPM6Q9BX84 2022 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 LYPD3O95274 346 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 TRACP01848 142 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 LGALS1P09382 135 aaKnown RBP7.41□□□□□ -1.22
SYNE1-209ENST00000367257 TIMP3P35625 211 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 CSRP2Q16527 193 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 PHLDA1Q8WV24 401 aaPredicted RBP7.41□□□□□ -1.22
SYNE1-209ENST00000367257 RNASE6Q93091 150 aaKnown RBP7.41□□□□□ -1.22
SYNE1-209ENST00000367257 M0R381 172 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 GUSBP1Q15486 140 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 COQ2Q96H96 371 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 PCM1Q15154 2024 aa7.41□□□□□ -1.22
SYNE1-209ENST00000367257 GGTLC3B5MD39 225 aa7.4□□□□□ -1.22
SYNE1-209ENST00000367257 PF4P02776 101 aa7.4□□□□□ -1.22
SYNE1-209ENST00000367257 EVI2AP22794 236 aa7.4□□□□□ -1.22
SYNE1-209ENST00000367257 DUTP33316 252 aaKnown RBP7.4□□□□□ -1.22
SYNE1-209ENST00000367257 LAGE3Q14657 143 aa7.4□□□□□ -1.22
SYNE1-209ENST00000367257 CDCP2Q5VXM1 449 aa7.4□□□□□ -1.22
SYNE1-209ENST00000367257 C9orf139Q6ZV77 190 aa7.4□□□□□ -1.22
SYNE1-209ENST00000367257 KLK15Q9H2R5 256 aa7.4□□□□□ -1.22
SYNE1-209ENST00000367257 IGKV1D-33P01593 117 aa7.4□□□□□ -1.22
SYNE1-209ENST00000367257 IGKV1-33P01594 117 aa7.4□□□□□ -1.22
SYNE1-209ENST00000367257 CELA2AP08217 269 aa7.4□□□□□ -1.22
SYNE1-209ENST00000367257 SP9P0CG40 484 aa7.4□□□□□ -1.22
SYNE1-209ENST00000367257 EFNB3Q15768 340 aa7.4□□□□□ -1.22
SYNE1-209ENST00000367257 TMEM42Q69YG0 159 aa7.4□□□□□ -1.22
SYNE1-209ENST00000367257 DNAJC30Q96LL9 226 aa7.4□□□□□ -1.22
SYNE1-209ENST00000367257 C1QTNF4Q9BXJ3 329 aa7.4□□□□□ -1.22
SYNE1-209ENST00000367257 PRSS22Q9GZN4 317 aa7.4□□□□□ -1.22
SYNE1-209ENST00000367257 FBXL15Q9H469 300 aa7.4□□□□□ -1.22
SYNE1-209ENST00000367257 ZNF688P0C7X2 276 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms