RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 RFPL3SP0C7P2 107 aa13.84□□□□□ -0.19
NID1-202ENST00000366595 NUP35Q8NFH5 326 aa13.84□□□□□ -0.19
NID1-202ENST00000366595 TMEM158Q8WZ71 300 aa13.84□□□□□ -0.19
NID1-202ENST00000366595 SCN1AP35498 2009 aa13.83□□□□□ -0.19
NID1-202ENST00000366595 SS18Q15532 418 aa13.83□□□□□ -0.19
NID1-202ENST00000366595 CSTL1Q9H114 145 aa13.83□□□□□ -0.2
NID1-202ENST00000366595 C1orf122Q6ZSJ8 110 aa13.83□□□□□ -0.2
NID1-202ENST00000366595 TRAV41A0A0B4J266 112 aa13.83□□□□□ -0.2
NID1-202ENST00000366595 SP9P0CG40 484 aa13.83□□□□□ -0.2
NID1-202ENST00000366595 TMEM258P61165 79 aa13.83□□□□□ -0.2
NID1-202ENST00000366595 IGKV2-40A0A087WW87 121 aaPredicted RBP13.82□□□□□ -0.2
NID1-202ENST00000366595 LOC102723996A0A087X1L8 192 aa13.82□□□□□ -0.2
NID1-202ENST00000366595 PMS2P5A8MQ11 134 aa13.82□□□□□ -0.2
NID1-202ENST00000366595 IGKV2D-40P01614 121 aaPredicted RBP13.82□□□□□ -0.2
NID1-202ENST00000366595 TRACP01848 142 aa13.82□□□□□ -0.2
NID1-202ENST00000366595 DMRTC2Q8IXT2 367 aaPredicted RBP13.82□□□□□ -0.2
NID1-202ENST00000366595 TMEM256Q8N2U0 113 aa13.82□□□□□ -0.2
NID1-202ENST00000366595 CYTL1Q9NRR1 136 aa13.82□□□□□ -0.2
NID1-202ENST00000366595 C1QTNF4Q9BXJ3 329 aa13.82□□□□□ -0.2
NID1-202ENST00000366595 RFNGQ9Y644 331 aa13.82□□□□□ -0.2
NID1-202ENST00000366595 A0A1W2PRX2 142 aa13.82□□□□□ -0.2
NID1-202ENST00000366595 SH2D1AO60880 128 aa13.82□□□□□ -0.2
NID1-202ENST00000366595 ZNF625Q96I27 306 aaPredicted RBP13.82□□□□□ -0.2
NID1-202ENST00000366595 SNHG12Q9BXW3 62 aa13.82□□□□□ -0.2
NID1-202ENST00000366595 LHFPL1Q86WI0 220 aa13.81□□□□□ -0.2
NID1-202ENST00000366595 FDCSPQ8NFU4 85 aa13.81□□□□□ -0.2
NID1-202ENST00000366595 ALS2Q96Q42 1657 aa13.81□□□□□ -0.2
NID1-202ENST00000366595 MYO7AQ13402 2215 aa13.81□□□□□ -0.2
NID1-202ENST00000366595 TIMM23O14925 209 aa13.81□□□□□ -0.2
NID1-202ENST00000366595 Q0VG73 95 aa13.81□□□□□ -0.2
NID1-202ENST00000366595 TMEM14EPQ6UXP3 125 aa13.81□□□□□ -0.2
NID1-202ENST00000366595 RNASE6Q93091 150 aaKnown RBP13.81□□□□□ -0.2
NID1-202ENST00000366595 ZNF319Q9P2F9 582 aa13.81□□□□□ -0.2
NID1-202ENST00000366595 RPUSD1Q9UJJ7 312 aaKnown RBP13.81□□□□□ -0.2
NID1-202ENST00000366595 IL18BPO95998 194 aa13.81□□□□□ -0.2
NID1-202ENST00000366595 HAPLN4Q86UW8 402 aa13.81□□□□□ -0.2
NID1-202ENST00000366595 F8W1H4 67 aa13.81□□□□□ -0.2
NID1-202ENST00000366595 LCN12Q6JVE5 192 aa13.81□□□□□ -0.2
NID1-202ENST00000366595 LILRA1O75019 489 aa13.8□□□□□ -0.2
NID1-202ENST00000366595 ZNF664Q8N3J9 261 aa13.8□□□□□ -0.2
NID1-202ENST00000366595 SCN9AQ15858 1988 aa13.8□□□□□ -0.2
NID1-202ENST00000366595 IGKV1-9A0A0C4DH69 117 aa13.8□□□□□ -0.2
NID1-202ENST00000366595 FNDC10F2Z333 226 aa13.8□□□□□ -0.2
NID1-202ENST00000366595 UBE2DNLQ8IWF7 75 aa13.8□□□□□ -0.2
NID1-202ENST00000366595 SIGLEC12Q96PQ1 595 aa13.8□□□□□ -0.2
NID1-202ENST00000366595 ZNF883P0CG24 379 aa13.8□□□□□ -0.2
NID1-202ENST00000366595 USP54Q70EL1 1684 aa13.8□□□□□ -0.2
NID1-202ENST00000366595 C1orf159Q96HA4 380 aa13.8□□□□□ -0.2
NID1-202ENST00000366595 SRRM4A7MD48 611 aaKnown RBP13.79□□□□□ -0.2
NID1-202ENST00000366595 IFITM1P13164 125 aa13.79□□□□□ -0.2
NID1-202ENST00000366595 TMEM141Q96I45 108 aa13.79□□□□□ -0.2
NID1-202ENST00000366595 TRBV7-1A0A0A6YYK4 115 aa13.79□□□□□ -0.2
NID1-202ENST00000366595 SLAQ13239 276 aa13.79□□□□□ -0.2
NID1-202ENST00000366595 RPP25LQ8N5L8 163 aaKnown RBP13.79□□□□□ -0.2
NID1-202ENST00000366595 A0A1W2PR77 199 aa13.79□□□□□ -0.2
NID1-202ENST00000366595 GLRX5Q86SX6 157 aa13.79□□□□□ -0.2
NID1-202ENST00000366595 DOCK1Q14185 1865 aa13.78□□□□□ -0.2
NID1-202ENST00000366595 PMVKQ15126 192 aa13.78□□□□□ -0.2
NID1-202ENST00000366595 MINOS1Q5TGZ0 78 aa13.78□□□□□ -0.2
NID1-202ENST00000366595 MINOS1-NBL1R4GNA1 71 aa13.78□□□□□ -0.2
NID1-202ENST00000366595 TRGV1A0A0A0MS02 117 aa13.78□□□□□ -0.2
NID1-202ENST00000366595 FAM231BA6NCW3 169 aa13.78□□□□□ -0.2
NID1-202ENST00000366595 CD33P20138 364 aa13.78□□□□□ -0.2
NID1-202ENST00000366595 SPATA31B1PQ5VZV4 182 aa13.78□□□□□ -0.2
NID1-202ENST00000366595 IGLV3-32A0A0A0MS00 114 aa13.78□□□□□ -0.2
NID1-202ENST00000366595 CELA3AP09093 270 aa13.78□□□□□ -0.2
NID1-202ENST00000366595 PAQR4Q8N4S7 273 aaPredicted RBP13.78□□□□□ -0.2
NID1-202ENST00000366595 MRAPQ8TCY5 172 aa13.78□□□□□ -0.2
NID1-202ENST00000366595 THBDP07204 575 aa13.77□□□□□ -0.2
NID1-202ENST00000366595 SUMO4Q6EEV6 95 aa13.77□□□□□ -0.2
NID1-202ENST00000366595 ZNF474Q6S9Z5 364 aaPredicted RBP13.77□□□□□ -0.2
NID1-202ENST00000366595 TRPT1Q86TN4 253 aaKnown RBP13.77□□□□□ -0.2
NID1-202ENST00000366595 EXOC3-AS1Q8N2X6 119 aa13.77□□□□□ -0.2
NID1-202ENST00000366595 LYZL4Q96KX0 146 aa13.77□□□□□ -0.2
NID1-202ENST00000366595 SCRT1Q9BWW7 348 aa13.77□□□□□ -0.2
NID1-202ENST00000366595 KIAA1551Q9HCM1 1747 aa13.77□□□□□ -0.2
NID1-202ENST00000366595 C9orf118A6NHY6 69 aa13.77□□□□□ -0.21
NID1-202ENST00000366595 ATP1A1-AS1Q5TC04 95 aa13.77□□□□□ -0.21
NID1-202ENST00000366595 LIME1Q9H400 295 aa13.77□□□□□ -0.21
NID1-202ENST00000366595 DSCR9P59020 149 aa13.77□□□□□ -0.21
NID1-202ENST00000366595 C15orf32Q32M92 178 aa13.77□□□□□ -0.21
NID1-202ENST00000366595 TCTEX1D4Q5JR98 221 aa13.77□□□□□ -0.21
NID1-202ENST00000366595 CTSBP07858 339 aa13.77□□□□□ -0.21
NID1-202ENST00000366595 NMSQ5H8A3 153 aa13.77□□□□□ -0.21
NID1-202ENST00000366595 REG4Q9BYZ8 158 aa13.76□□□□□ -0.21
NID1-202ENST00000366595 METRNQ9UJH8 293 aa13.76□□□□□ -0.21
NID1-202ENST00000366595 A8MWP6 167 aa13.76□□□□□ -0.21
NID1-202ENST00000366595 TMEM126AQ9H061 195 aa13.76□□□□□ -0.21
NID1-202ENST00000366595 RHODO00212 210 aa13.76□□□□□ -0.21
NID1-202ENST00000366595 PDE6HQ13956 83 aa13.76□□□□□ -0.21
NID1-202ENST00000366595 RSPO4Q2I0M5 234 aaPredicted RBP13.75□□□□□ -0.21
NID1-202ENST00000366595 USMG5Q96IX5 58 aa13.75□□□□□ -0.21
NID1-202ENST00000366595 NHSQ6T4R5 1651 aa13.75□□□□□ -0.21
NID1-202ENST00000366595 J3QRE1 110 aa13.75□□□□□ -0.21
NID1-202ENST00000366595 CELA3BP08861 270 aa13.75□□□□□ -0.21
NID1-202ENST00000366595 SPXQ9BT56 116 aa13.75□□□□□ -0.21
NID1-202ENST00000366595 TIAF1O95411 115 aa13.75□□□□□ -0.21
NID1-202ENST00000366595 C3orf36Q3SXR2 165 aa13.75□□□□□ -0.21
NID1-202ENST00000366595 C14orf178Q8N769 122 aaPredicted RBP13.75□□□□□ -0.21
NID1-202ENST00000366595 SRSF8Q9BRL6 282 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms