RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 RBFOX2O43251 390 aaKnown RBP eCLIP5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 NUDT3O95989 172 aa5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 IGKV3-20P01619 116 aa5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 FGF2P09038 288 aa5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 NQO2P16083 231 aa5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 FGF9P31371 208 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 P2RY1P47900 373 aa5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 TBCEQ15813 527 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 BAK1Q16611 211 aa5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 SSX7Q7RTT5 188 aa5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 C1orf158Q8N1D5 194 aa5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 ZNF709Q8N972 641 aa5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 C15orf53Q8NAA6 179 aa5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 OR1L8Q8NGR8 309 aa5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 OR1P1Q8NH06 330 aa5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 MCFD2Q8NI22 146 aa5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 DYNC2LI1Q8TCX1 351 aa5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 TMEM203Q969S6 136 aa5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 PDCD10Q9BUL8 212 aa5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 RAB22AQ9UL26 194 aa5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 LOC102723971A0A1B0GUV8 181 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 HELTA6NFD8 242 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 SMIM9A6NGZ8 99 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 CYB5BO43169 146 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 HPRT1P00492 218 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 EIF4EP06730 217 aaKnown RBP5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 HSMCR30P0CW71 290 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 SMIM6P0DI80 62 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 CRYBB3P26998 211 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 DAD1P61803 113 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 NEDD8Q15843 81 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 SSX1Q16384 188 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 CTF1Q16619 201 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 SPANXN2Q5MJ10 180 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 Q6ZSN1 163 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 HSD17B13Q7Z5P4 300 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 MS4A15Q8N5U1 240 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 CLRN3Q8NCR9 226 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 DMBX1Q8NFW5 382 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 NUDCD2Q8WVJ2 157 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 SECTM1Q8WVN6 248 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 FCGR1BQ92637 280 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 UHRF2Q96PU4 802 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 TXN2Q99757 166 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 GINS3Q9BRX5 216 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 C1QTNF4Q9BXJ3 329 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 Q9H3A6 140 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 ACOT13Q9NPJ3 140 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 OR51B2Q9Y5P1 312 aa5.86□□□□□ -1.47
HMGB1P39-201ENST00000366304 FAM90A26D6RGX4 464 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 GNG7O60262 68 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 FABP1P07148 127 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 DNAH10OSP0CZ25 163 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 HLA-DRB4P13762 266 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 DTYMKP23919 212 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 OR10A3P58181 314 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 RPS25P62851 125 aaKnown RBP5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 MLLT11Q13015 90 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 DHRS2Q13268 280 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 ICAM4Q14773 271 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 FCN2Q15485 313 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 SERTAD4-AS1Q5TG53 156 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 ZNF818PQ6ZRF7 136 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 OR51H1Q8NH63 302 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 GLMPQ8WWB7 406 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 RBPMSQ93062 196 aaKnown RBP5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 PINX1Q96BK5 328 aaKnown RBP5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 MGLLQ99685 303 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 KRTAP4-9Q9BYQ8 210 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 OR51M1Q9H341 326 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 PLEKHA2Q9HB19 425 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 MCUBQ9NWR8 336 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 PFDN2Q9UHV9 154 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 HLA-DRB4X5D2U9 266 aa5.85□□□□□ -1.47
HMGB1P39-201ENST00000366304 TEX48A0A1B0GUV7 120 aa5.84□□□□□ -1.47
HMGB1P39-201ENST00000366304 MARCH11A6NNE9 402 aa5.84□□□□□ -1.47
HMGB1P39-201ENST00000366304 TMEM50AO95807 157 aa5.84□□□□□ -1.47
HMGB1P39-201ENST00000366304 NPPCP23582 126 aa5.84□□□□□ -1.47
HMGB1P39-201ENST00000366304 G6PCP35575 357 aa5.84□□□□□ -1.47
HMGB1P39-201ENST00000366304 NUP62P37198 522 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P39-201ENST00000366304 LINC00315P59091 139 aa5.84□□□□□ -1.47
HMGB1P39-201ENST00000366304 TRAM1Q15629 374 aa5.84□□□□□ -1.47
HMGB1P39-201ENST00000366304 CDNFQ49AH0 187 aa5.84□□□□□ -1.47
HMGB1P39-201ENST00000366304 CNIH2Q6PI25 160 aa5.84□□□□□ -1.47
HMGB1P39-201ENST00000366304 SLIRPQ9GZT3 109 aaKnown RBP5.84□□□□□ -1.47
HMGB1P39-201ENST00000366304 NAA50Q9GZZ1 169 aaKnown RBP5.84□□□□□ -1.47
HMGB1P39-201ENST00000366304 SLC35B3Q9H1N7 401 aa5.84□□□□□ -1.47
HMGB1P39-201ENST00000366304 ZNF586Q9NXT0 402 aa5.84□□□□□ -1.47
HMGB1P39-201ENST00000366304 ANXA10Q9UJ72 324 aa5.84□□□□□ -1.47
HMGB1P39-201ENST00000366304 TNFRSF18Q9Y5U5 241 aa5.84□□□□□ -1.47
HMGB1P39-201ENST00000366304 FAT3Q8TDW7 4589 aa5.84□□□□□ -1.47
HMGB1P39-201ENST00000366304 PLAC8L1A1L4L8 177 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 TMEM235A6NFC5 223 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 F5H768 121 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 KRASP01116 189 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 CTXN2P0C2S0 81 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 DEFB130BP0DP73 79 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 DEFB130AP0DP74 79 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 GADD45AP24522 165 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 PSMA1P25786 263 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms