RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 KDELR1P24390 212 aa-0.27□□□□□ -2.45
RNU4-28P-201ENST00000364739 HOXA6P31267 233 aa-0.27□□□□□ -2.45
RNU4-28P-201ENST00000364739 NABP2Q9BQ15 211 aa-0.27□□□□□ -2.45
RNU4-28P-201ENST00000364739 BCL2L10Q9HD36 194 aa-0.27□□□□□ -2.45
RNU4-28P-201ENST00000364739 C14orf132Q9NPU4 83 aa-0.27□□□□□ -2.45
RNU4-28P-201ENST00000364739 USE1Q9NZ43 259 aa-0.27□□□□□ -2.45
RNU4-28P-201ENST00000364739 TNFSF18Q9UNG2 199 aa-0.27□□□□□ -2.45
RNU4-28P-201ENST00000364739 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.27□□□□□ -2.45
RNU4-28P-201ENST00000364739 KNTC1P50748 2209 aa-0.28□□□□□ -2.45
RNU4-28P-201ENST00000364739 IGSF10Q6WRI0 2623 aa-0.28□□□□□ -2.45
RNU4-28P-201ENST00000364739 RYR3Q15413 4870 aa-0.28□□□□□ -2.45
RNU4-28P-201ENST00000364739 STAB1Q9NY15 2570 aa-0.28□□□□□ -2.45
RNU4-28P-201ENST00000364739 NUPR1O60356 82 aa-0.28□□□□□ -2.45
RNU4-28P-201ENST00000364739 CD79AP11912 226 aa-0.28□□□□□ -2.45
RNU4-28P-201ENST00000364739 TSNQ15631 228 aaKnown RBP-0.28□□□□□ -2.45
RNU4-28P-201ENST00000364739 C6orf52Q5T4I8 152 aa-0.28□□□□□ -2.45
RNU4-28P-201ENST00000364739 TMEM254Q8TBM7 123 aa-0.28□□□□□ -2.45
RNU4-28P-201ENST00000364739 ORMDL1Q9P0S3 153 aa-0.28□□□□□ -2.45
RNU4-28P-201ENST00000364739 DOPEY1Q5JWR5 2465 aa-0.28□□□□□ -2.45
RNU4-28P-201ENST00000364739 ROBO3Q96MS0 1386 aa-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 FREM3P0C091 2139 aa-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 TCRBV4S1A1TA0A5B7 111 aa-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 OR4C46A6NHA9 309 aa-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 M0QX08 132 aa-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 DCTN3O75935 186 aa-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 AHSA1O95433 338 aa-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 CALB1P05937 261 aa-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 CD2P06729 351 aa-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 SMIM10L2AP0DMW4 78 aa-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 SMIM10L2BP0DMW5 78 aa-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 PSME3P61289 254 aa-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 Q8IYB0 196 aa-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 PTH2Q96A98 100 aa-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 ADAT3Q96EY9 351 aaPredicted RBP-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 LINC00052Q96N35 136 aa-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 OR52E6Q96RD3 313 aa-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 HIST1H2BLQ99880 126 aa-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 HRNRQ86YZ3 2850 aaPredicted RBP-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 NEO1Q92859 1461 aa-0.29□□□□□ -2.46
RNU4-28P-201ENST00000364739 RIMBP3CA6NJZ7 1639 aa-0.3□□□□□ -2.46
RNU4-28P-201ENST00000364739 RIMBP3BA6NNM3 1639 aa-0.3□□□□□ -2.46
RNU4-28P-201ENST00000364739 RIMBP3Q9UFD9 1639 aa-0.3□□□□□ -2.46
RNU4-28P-201ENST00000364739 A0A087X0T9 212 aa-0.3□□□□□ -2.46
RNU4-28P-201ENST00000364739 TRAV26-2A0A0B4J265 109 aa-0.3□□□□□ -2.46
RNU4-28P-201ENST00000364739 C7orf71A4D174 169 aa-0.3□□□□□ -2.46
RNU4-28P-201ENST00000364739 NUPR2A6NF83 97 aa-0.3□□□□□ -2.46
RNU4-28P-201ENST00000364739 PIRO00625 290 aa-0.3□□□□□ -2.46
RNU4-28P-201ENST00000364739 SPINT3P49223 89 aa-0.3□□□□□ -2.46
RNU4-28P-201ENST00000364739 ZNF137PP52743 207 aa-0.3□□□□□ -2.46
RNU4-28P-201ENST00000364739 YPEL3P61236 119 aaPredicted RBP-0.3□□□□□ -2.46
RNU4-28P-201ENST00000364739 HAGHLQ6PII5 290 aaPredicted RBP-0.3□□□□□ -2.46
RNU4-28P-201ENST00000364739 OR52L1Q8NGH7 329 aa-0.3□□□□□ -2.46
RNU4-28P-201ENST00000364739 OR2T10Q8NGZ9 312 aa-0.3□□□□□ -2.46
RNU4-28P-201ENST00000364739 NCOR2Q9Y618 2525 aa-0.31□□□□□ -2.46
RNU4-28P-201ENST00000364739 DHFRP00374 187 aa-0.31□□□□□ -2.46
RNU4-28P-201ENST00000364739 OR2F1Q13607 317 aa-0.31□□□□□ -2.46
RNU4-28P-201ENST00000364739 KRT222Q8N1A0 295 aa-0.31□□□□□ -2.46
RNU4-28P-201ENST00000364739 SLAMF6Q96DU3 332 aa-0.31□□□□□ -2.46
RNU4-28P-201ENST00000364739 MRPL27Q9P0M9 148 aaKnown RBP-0.31□□□□□ -2.46
RNU4-28P-201ENST00000364739 CYSLTR1Q9Y271 337 aa-0.31□□□□□ -2.46
RNU4-28P-201ENST00000364739 SNAPC4Q5SXM2 1469 aa-0.31□□□□□ -2.46
RNU4-28P-201ENST00000364739 TPRP12270 2363 aaKnown RBP-0.31□□□□□ -2.46
RNU4-28P-201ENST00000364739 FAM236DA0A1B0GTK5 79 aa-0.32□□□□□ -2.46
RNU4-28P-201ENST00000364739 FAM236CP0DP71 79 aa-0.32□□□□□ -2.46
RNU4-28P-201ENST00000364739 HIST1H1EP10412 219 aaKnown RBP-0.32□□□□□ -2.46
RNU4-28P-201ENST00000364739 RHOBP62745 196 aa-0.32□□□□□ -2.46
RNU4-28P-201ENST00000364739 DYNLT1P63172 113 aa-0.32□□□□□ -2.46
RNU4-28P-201ENST00000364739 OR2T35Q8NGX2 323 aa-0.32□□□□□ -2.46
RNU4-28P-201ENST00000364739 PSMF1Q92530 271 aa-0.32□□□□□ -2.46
RNU4-28P-201ENST00000364739 UBR4Q5T4S7 5183 aa-0.32□□□□□ -2.46
RNU4-28P-201ENST00000364739 LOC285556D6RIA3 1793 aa-0.32□□□□□ -2.46
RNU4-28P-201ENST00000364739 LRP1Q07954 4544 aaKnown RBP-0.33□□□□□ -2.46
RNU4-28P-201ENST00000364739 CECR2Q9BXF3 1484 aa-0.33□□□□□ -2.46
RNU4-28P-201ENST00000364739 NSD1Q96L73 2696 aaPredicted RBP-0.33□□□□□ -2.46
RNU4-28P-201ENST00000364739 USH2AO75445 5202 aa-0.33□□□□□ -2.46
RNU4-28P-201ENST00000364739 CHP2O43745 196 aa-0.33□□□□□ -2.46
RNU4-28P-201ENST00000364739 CASP1P29466 404 aa-0.33□□□□□ -2.46
RNU4-28P-201ENST00000364739 HIST3H3Q16695 136 aa-0.33□□□□□ -2.46
RNU4-28P-201ENST00000364739 ACOT6Q3I5F7 207 aaPredicted RBP-0.33□□□□□ -2.46
RNU4-28P-201ENST00000364739 SLC30A7Q8NEW0 376 aa-0.33□□□□□ -2.46
RNU4-28P-201ENST00000364739 LLPHQ9BRT6 129 aaKnown RBP-0.33□□□□□ -2.46
RNU4-28P-201ENST00000364739 C20orf27Q9GZN8 174 aa-0.33□□□□□ -2.46
RNU4-28P-201ENST00000364739 TNS3Q68CZ2 1445 aa-0.33□□□□□ -2.46
RNU4-28P-201ENST00000364739 RYR1P21817 5038 aa-0.33□□□□□ -2.46
RNU4-28P-201ENST00000364739 HERC2O95714 4834 aa-0.34□□□□□ -2.46
RNU4-28P-201ENST00000364739 EPPK1P58107 5090 aaKnown RBP-0.34□□□□□ -2.46
RNU4-28P-201ENST00000364739 RBP1P09455 135 aa-0.34□□□□□ -2.46
RNU4-28P-201ENST00000364739 DEFA3P59666 94 aa-0.34□□□□□ -2.46
RNU4-28P-201ENST00000364739 MRPS26Q9BYN8 205 aaKnown RBP-0.34□□□□□ -2.46
RNU4-28P-201ENST00000364739 CCDC90BQ9GZT6 254 aa-0.34□□□□□ -2.46
RNU4-28P-201ENST00000364739 UCK1Q9HA47 277 aa-0.34□□□□□ -2.46
RNU4-28P-201ENST00000364739 IDI2-AS1Q9NZ38 188 aa-0.34□□□□□ -2.46
RNU4-28P-201ENST00000364739 ATP6V1DQ9Y5K8 247 aa-0.34□□□□□ -2.46
RNU4-28P-201ENST00000364739 HYDINQ4G0P3 5121 aa-0.35□□□□□ -2.46
RNU4-28P-201ENST00000364739 KIAA1109Q2LD37 5005 aa-0.35□□□□□ -2.47
RNU4-28P-201ENST00000364739 IGLV3-32A0A0A0MS00 114 aa-0.35□□□□□ -2.47
RNU4-28P-201ENST00000364739 TIMM17BO60830 172 aa-0.35□□□□□ -2.47
RNU4-28P-201ENST00000364739 ANP32AP39687 249 aaKnown RBP-0.35□□□□□ -2.47
RNU4-28P-201ENST00000364739 FOXA3P55318 350 aaPredicted RBP-0.35□□□□□ -2.47
RNU4-28P-201ENST00000364739 C12orf74Q32Q52 190 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 280.6 ms